Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_G11
         (531 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              35   5e-04
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          23   2.6  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   4.5  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   5.9  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   5.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   5.9  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   7.9  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 35.1 bits (77), Expect = 5e-04
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = +1

Query: 121 CARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVK 231
           C R  RPVC S+GK Y N C L+  R   HS   + K
Sbjct: 110 CPRRHRPVCASNGKIYANHCELH--RAACHSGSSLTK 144



 Score = 29.1 bits (62), Expect = 0.030
 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
 Frame = +1

Query: 331 ECSRPLAPSLEMKHRG---ECQEVKVADIQPCICTREI----KQVCGSDGVTYGNPCLLN 489
           E SR + P    K+ G   EC+    + I  C+C R+     + VC S+G  Y N C L+
Sbjct: 74  ESSRSIDPCAS-KYCGIGKECELSPNSTIAVCVCMRKCPRRHRPVCASNGKIYANHCELH 132

Query: 490 CA 495
            A
Sbjct: 133 RA 134



 Score = 25.8 bits (54), Expect = 0.28
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 265 CTFIYAPVCGTDGNTYPNKCSL 330
           C   + PVC ++G  Y N C L
Sbjct: 110 CPRRHRPVCASNGKIYANHCEL 131


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +1

Query: 298 DGNTYPNKCSLECSRPLAPSLEMKHR 375
           DGN+Y N     CSR  +   + K R
Sbjct: 241 DGNSYRNDGERSCSRDRSREYKKKDR 266


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 9/25 (36%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
 Frame = -3

Query: 307 CSRLCHRPGHI*RY-RRKDRLPHTY 236
           C RLC+R G + R+    + +P  Y
Sbjct: 247 CERLCNRLGRVKRFINWHEPIPEAY 271


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -2

Query: 398 TLTSWHSPRCFIS 360
           T  SWHSP   IS
Sbjct: 152 TEASWHSPEAHIS 164


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -3

Query: 247 PHTYPLSRFSNRCASCPSRNTR 182
           P  YPL RF N     P R+ R
Sbjct: 67  PSVYPLLRFENPETHHPIRHGR 88


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 14/65 (21%), Positives = 23/65 (35%)
 Frame = +1

Query: 154 DGKTYHNQCLLYCERDKTHSDLKIVKEGTCEEADPCVCTFIYAPVCGTDGNTYPNKCSLE 333
           DGK  H+       +  + S  +  +     + DP   + + A + GT     P  C   
Sbjct: 432 DGKLPHDDQPPLSPQSDSSSSSRSAESPMSVQVDPMAASVVAAALTGTYPTLLPQWCLPP 491

Query: 334 CSRPL 348
              PL
Sbjct: 492 REAPL 496


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = +1

Query: 430 EIKQVCGSDGVTYGNPCLLNCATQSNPTFE 519
           +I+Q    + +  G    L C    NPT E
Sbjct: 395 QIRQAFAEETLQPGPSMFLKCVASGNPTPE 424


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,271
Number of Sequences: 438
Number of extensions: 3350
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14968302
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)