Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_G10
         (517 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     24   0.92 
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   1.2  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   4.9  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.6  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.8 bits (49), Expect = 0.92
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 338 ANCTTTYCLCTH 303
           +NC   YC CTH
Sbjct: 496 SNCENEYCECTH 507


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = -1

Query: 217 SKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIWMFGCMVVFLSYHDSL 71
           SK   C   L+ + +F  L +F  LE+ D   +  F C+   +S  + L
Sbjct: 310 SKGSSCYRLLSRNGQFIYLRTFGFLEIDDQGTVESFVCVNTLVSEQEGL 358


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 11/43 (25%), Positives = 20/43 (46%)
 Frame = -1

Query: 250 LRYSIPSFVNTSKMPPCELFLNISSRFK*LHSFDHLEVRDLLE 122
           L+++I S     K+   E+ L   +     H F  + V D+L+
Sbjct: 107 LKFNISSIPRHEKLTAAEIKLTRETAKNTSHPFQRVLVHDILQ 149


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 171 LSDCIALITWRLGIFSRS 118
           L++CI  +   LG+ SRS
Sbjct: 200 LTNCICFVPGVLGLLSRS 217


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 171 LSDCIALITWRLGIFSRS 118
           L++CI  +   LG+ SRS
Sbjct: 200 LTNCICFVPGVLGLLSRS 217


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 171 LSDCIALITWRLGIFSRS 118
           L++CI  +   LG+ SRS
Sbjct: 200 LTNCICFVPGVLGLLSRS 217


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 171 LSDCIALITWRLGIFSRS 118
           L++CI  +   LG+ SRS
Sbjct: 200 LTNCICFVPGVLGLLSRS 217


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,794
Number of Sequences: 336
Number of extensions: 2438
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)