Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_G09
(510 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 38 0.003
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 38 0.003
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 38 0.003
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 38 0.003
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 38 0.003
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 38 0.003
Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical pr... 31 0.37
Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical p... 31 0.37
Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical pr... 31 0.64
U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog (hedg... 31 0.64
M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger pro... 31 0.64
Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical p... 30 1.1
Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical p... 30 1.1
U41274-7|AAA82463.1| 1610|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z54237-6|CAE52903.1| 425|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z54235-8|CAE52906.1| 425|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical p... 29 2.0
Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical pr... 29 2.0
AL117195-26|CAB55037.1| 153|Caenorhabditis elegans Hypothetical... 29 2.0
Z83113-2|CAB05544.1| 479|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 28 3.4
AC006682-2|AAF39957.1| 370|Caenorhabditis elegans Hypothetical ... 28 3.4
Z72503-1|CAA96596.2| 617|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z81146-5|CAB03522.3| 699|Caenorhabditis elegans Hypothetical pr... 27 7.9
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 38.3 bits (85), Expect = 0.003
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -1
Query: 465 PLQYFRCLGLGHTSPVCPSGSERGSQSFRCGEQGYKVVHCRGEAE 331
P++ F C G GH S CP RG F CGEQG++ C A+
Sbjct: 241 PMKCFNCKGEGHRSAECPE-PPRG--CFNCGEQGHRSNECPNPAK 282
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 38.3 bits (85), Expect = 0.003
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -1
Query: 465 PLQYFRCLGLGHTSPVCPSGSERGSQSFRCGEQGYKVVHCRGEAE 331
P++ F C G GH S CP RG F CGEQG++ C A+
Sbjct: 452 PMKCFNCKGEGHRSAECPE-PPRG--CFNCGEQGHRSNECPNPAK 493
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 38.3 bits (85), Expect = 0.003
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -1
Query: 465 PLQYFRCLGLGHTSPVCPSGSERGSQSFRCGEQGYKVVHCRGEAE 331
P++ F C G GH S CP RG F CGEQG++ C A+
Sbjct: 452 PMKCFNCKGEGHRSAECPE-PPRG--CFNCGEQGHRSNECPNPAK 493
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 38.3 bits (85), Expect = 0.003
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -1
Query: 465 PLQYFRCLGLGHTSPVCPSGSERGSQSFRCGEQGYKVVHCRGEAE 331
P++ F C G GH S CP RG F CGEQG++ C A+
Sbjct: 241 PMKCFNCKGEGHRSAECPE-PPRG--CFNCGEQGHRSNECPNPAK 282
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 38.3 bits (85), Expect = 0.003
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -1
Query: 465 PLQYFRCLGLGHTSPVCPSGSERGSQSFRCGEQGYKVVHCRGEAE 331
P++ F C G GH S CP RG F CGEQG++ C A+
Sbjct: 241 PMKCFNCKGEGHRSAECPE-PPRG--CFNCGEQGHRSNECPNPAK 282
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 38.3 bits (85), Expect = 0.003
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -1
Query: 465 PLQYFRCLGLGHTSPVCPSGSERGSQSFRCGEQGYKVVHCRGEAE 331
P++ F C G GH S CP RG F CGEQG++ C A+
Sbjct: 452 PMKCFNCKGEGHRSAECPE-PPRG--CFNCGEQGHRSNECPNPAK 493
>Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 31.5 bits (68), Expect = 0.37
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 16 WNSNNYIPRDSIYSQTRCNLSHYQYIHIYTLYLSHPVPSRPPP-EEMVTPARPGHLLDS 189
++SN P S YS N S Y + + PVPS PPP E + +R +L DS
Sbjct: 377 YDSNRLSPAPSQYSTQSRNQSQQHYQQ-HVVQAPPPVPSNPPPSNEQQSQSRVQNLPDS 434
>Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 31.5 bits (68), Expect = 0.37
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 16 WNSNNYIPRDSIYSQTRCNLSHYQYIHIYTLYLSHPVPSRPPP-EEMVTPARPGHLLDS 189
++SN P S YS N S Y + + PVPS PPP E + +R +L DS
Sbjct: 377 YDSNRLSPAPSQYSTQSRNQSQQHYQQ-HVVQAPPPVPSNPPPSNEQQSQSRVQNLPDS 434
>Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical protein
C25D7.3 protein.
Length = 2150
Score = 30.7 bits (66), Expect = 0.64
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 136 PPPEEMVTPARPGHL-LDSFPTPSLGLGIRQCPDSEKT 246
P PE++ RPGH+ + F TPSL G S KT
Sbjct: 1582 PEPEDLHETERPGHVGEEGFETPSLRTGRESTASSVKT 1619
>U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 6 protein.
Length = 559
Score = 30.7 bits (66), Expect = 0.64
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 109 YLSHPVPSRPPPEEMVTPARPGHLLD 186
Y+ PVP+RP P TPARP ++
Sbjct: 209 YIERPVPARPAPYIEPTPARPAPYIE 234
Score = 29.5 bits (63), Expect = 1.5
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 103 TLYLSHPVPSRPPPE-EMVTPARPGHLLDSFPTPS 204
T Y+ PVP+RP P E PARP ++ P P+
Sbjct: 183 TPYIERPVPARPAPYIERPEPARPAPYIER-PVPA 216
Score = 28.7 bits (61), Expect = 2.6
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +1
Query: 109 YLSHPVPSRPPPE-EMVTPARPGHLLDSFPTPS 204
Y+ PVP+RP P E PARP ++ P P+
Sbjct: 173 YIERPVPARPTPYIERPVPARPAPYIER-PEPA 204
>M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger protein
protein.
Length = 2150
Score = 30.7 bits (66), Expect = 0.64
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 136 PPPEEMVTPARPGHL-LDSFPTPSLGLGIRQCPDSEKT 246
P PE++ RPGH+ + F TPSL G S KT
Sbjct: 1582 PEPEDLHETERPGHVGEEGFETPSLRTGRESTASSVKT 1619
>Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 29.9 bits (64), Expect = 1.1
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +1
Query: 16 WNSNNYIPRDSIYSQTRCNLSHYQYIHIYTLYLSHPVPSRPPPEEMVT 159
++SN P S YS N S Y + + PVPS PPP T
Sbjct: 377 YDSNRLSPAPSQYSTQSRNQSQQHYQQ-HVVQAPPPVPSNPPPSNDTT 423
>Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 29.9 bits (64), Expect = 1.1
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +1
Query: 16 WNSNNYIPRDSIYSQTRCNLSHYQYIHIYTLYLSHPVPSRPPPEEMVT 159
++SN P S YS N S Y + + PVPS PPP T
Sbjct: 377 YDSNRLSPAPSQYSTQSRNQSQQHYQQ-HVVQAPPPVPSNPPPSNDTT 423
>U41274-7|AAA82463.1| 1610|Caenorhabditis elegans Hypothetical
protein T04G9.1 protein.
Length = 1610
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +1
Query: 37 PRDSIYSQTRCNLSHYQYIHIYTLYLSHPVPSRPPPEE 150
PR Q + HYQ H+Y+L PV PP E+
Sbjct: 480 PRKRQRKQILVSDHHYQSSHLYSLLQDDPVKHEPPSEK 517
>Z54237-6|CAE52903.1| 425|Caenorhabditis elegans Hypothetical
protein T11B7.4a protein.
Length = 425
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +1
Query: 16 WNSNNYIPRDSIYSQTRCNLSHYQYIHIYTLYLSHPVPSRPPPEEM 153
++SN P S YS N S Y + + PVPS PPP +
Sbjct: 377 YDSNRLSPAPSQYSTQSRNQSQQHYQQ-HVVQAPPPVPSNPPPSNV 421
>Z54235-8|CAE52906.1| 425|Caenorhabditis elegans Hypothetical
protein T11B7.4a protein.
Length = 425
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +1
Query: 16 WNSNNYIPRDSIYSQTRCNLSHYQYIHIYTLYLSHPVPSRPPPEEM 153
++SN P S YS N S Y + + PVPS PPP +
Sbjct: 377 YDSNRLSPAPSQYSTQSRNQSQQHYQQ-HVVQAPPPVPSNPPPSNV 421
>Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +1
Query: 16 WNSNNYIPRDSIYSQTRCNLSHYQYIHIYTLYLSHPVPSRPPP 144
++SN P S YS N S Y + + PVPS PPP
Sbjct: 306 YDSNRLSPAPSQYSTQSRNQSQQHYQQ-HVVQAPPPVPSNPPP 347
>Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +1
Query: 16 WNSNNYIPRDSIYSQTRCNLSHYQYIHIYTLYLSHPVPSRPPP 144
++SN P S YS N S Y + + PVPS PPP
Sbjct: 377 YDSNRLSPAPSQYSTQSRNQSQQHYQQ-HVVQAPPPVPSNPPP 418
>Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +1
Query: 16 WNSNNYIPRDSIYSQTRCNLSHYQYIHIYTLYLSHPVPSRPPP 144
++SN P S YS N S Y + + PVPS PPP
Sbjct: 306 YDSNRLSPAPSQYSTQSRNQSQQHYQQ-HVVQAPPPVPSNPPP 347
>Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +1
Query: 16 WNSNNYIPRDSIYSQTRCNLSHYQYIHIYTLYLSHPVPSRPPP 144
++SN P S YS N S Y + + PVPS PPP
Sbjct: 377 YDSNRLSPAPSQYSTQSRNQSQQHYQQ-HVVQAPPPVPSNPPP 418
>AL117195-26|CAB55037.1| 153|Caenorhabditis elegans Hypothetical
protein Y57A10A.32 protein.
Length = 153
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = +1
Query: 46 SIYSQTRCNLSHY-QYIHIYTLYLSHPVPSRPPPEEMVTPARPGHLLDSFPT 198
+IY Q N + Y + P P PPP P L+D+FPT
Sbjct: 54 AIYPQQHANRDQFANYRRNAAAFEEPPAPPPPPPPPQYIRDLPQLLIDTFPT 105
>Z83113-2|CAB05544.1| 479|Caenorhabditis elegans Hypothetical
protein K08H10.4 protein.
Length = 479
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -2
Query: 509 NSII*RALPDRFNLCPCSTSGVWAWVTL 426
NS A PD N+ P S GV++W TL
Sbjct: 152 NSGFFAAFPDAVNVMPGSDEGVYSWFTL 179
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.3 bits (60), Expect = 3.4
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +1
Query: 124 VPSRPPPEEMVTPARPGHLLDSFPTPSLGLGIRQCPDSEKT-LHPAILALIGLN 282
+P PP + P P P P GLG+ P KT ++PA+ L G N
Sbjct: 94 IPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPPRPKTPVNPALAKLGGKN 147
>AC006682-2|AAF39957.1| 370|Caenorhabditis elegans Hypothetical
protein R193.3 protein.
Length = 370
Score = 28.3 bits (60), Expect = 3.4
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = +1
Query: 313 VVMSVTFCLTPTMYDLVA----LLPTPKTLASPF*SRRTDWASVTQAQTPEVLQGHRL 474
+++ +TF L MY A LPTP +L F S R+ SV +++ GHR+
Sbjct: 65 LIVLITFLLLIVMYMNRAPCGPRLPTPASLGFEFSSLRSMKQSVLVISVGKIINGHRI 122
>Z72503-1|CAA96596.2| 617|Caenorhabditis elegans Hypothetical
protein C26C6.3 protein.
Length = 617
Score = 27.9 bits (59), Expect = 4.5
Identities = 27/83 (32%), Positives = 32/83 (38%), Gaps = 3/83 (3%)
Frame = +1
Query: 1 ATSVAWNSNNYIPRDSIYSQT---RCNLSHYQYIHIYTLYLSHPVPSRPPPEEMVTPARP 171
A SV S + RDS+Y QT R LS Y I T Y S E RP
Sbjct: 281 AFSVDQKSKTVVTRDSLYQQTIGQREKLSFYDVATINTAYCKDECKSEKTKCENGGYMRP 340
Query: 172 GHLLDSFPTPSLGLGIRQCPDSE 240
+ P GLG +C +E
Sbjct: 341 SKCSECL-CPD-GLGGEKCEKNE 361
>Z81146-5|CAB03522.3| 699|Caenorhabditis elegans Hypothetical
protein K10D11.3 protein.
Length = 699
Score = 27.1 bits (57), Expect = 7.9
Identities = 10/43 (23%), Positives = 22/43 (51%)
Frame = +3
Query: 117 PSRSIQAPTRGDGHPGQTRPSLRQLSHPFPWFGNTTVSRFRKN 245
P++ Q PT+ + + +P+PW+ N+ + R++ N
Sbjct: 27 PTQDTQFPTKNNN---SSTDQYNPYYYPYPWWPNSYIPRYKSN 66
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,750,494
Number of Sequences: 27780
Number of extensions: 349396
Number of successful extensions: 1032
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1024
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 988489374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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