Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_G09
(510 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 26 0.26
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 23 1.8
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 21 5.6
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 21 5.6
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 21 5.6
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 21 5.6
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 21 5.6
AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein. 21 5.6
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 5.6
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 21 7.4
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 21 7.4
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 21 9.8
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 21 9.8
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 21 9.8
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 21 9.8
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 21 9.8
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 9.8
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 9.8
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 21 9.8
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 21 9.8
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 25.8 bits (54), Expect = 0.26
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3
Query: 303 YYPCCDECY 329
YYPCCDE Y
Sbjct: 214 YYPCCDEPY 222
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 23.0 bits (47), Expect = 1.8
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 303 YYPCCDECY 329
YYPCC E Y
Sbjct: 228 YYPCCTEPY 236
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 21.4 bits (43), Expect = 5.6
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -3
Query: 280 LGLLGQEWLGARFFLNLDTVVFPNQGKGWESCLRD 176
L LL ++ LG + N+ V P+ + W + LRD
Sbjct: 380 LDLLVRKVLGFGYESNVKYQVVPSALQMWSTSLRD 414
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.4 bits (43), Expect = 5.6
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +3
Query: 303 YYPCCDECYV 332
+Y CCDE Y+
Sbjct: 223 FYTCCDEPYL 232
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.4 bits (43), Expect = 5.6
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +3
Query: 303 YYPCCDECYV 332
+Y CCDE Y+
Sbjct: 223 FYTCCDEPYL 232
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 21.4 bits (43), Expect = 5.6
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +3
Query: 303 YYPCCDECYV 332
+Y CCDE Y+
Sbjct: 219 FYTCCDEPYL 228
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 21.4 bits (43), Expect = 5.6
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -3
Query: 280 LGLLGQEWLGARFFLNLDTVVFPNQGKGWESCLRD 176
L LL ++ LG + N+ V P+ + W + LRD
Sbjct: 380 LDLLVRKVLGFGYESNVKYQVVPSALQMWSTSLRD 414
>AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein.
Length = 226
Score = 21.4 bits (43), Expect = 5.6
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -3
Query: 280 LGLLGQEWLGARFFLNLDTVVFPNQGKGWESCLRD 176
L LL ++ LG + N+ V P+ + W + LRD
Sbjct: 6 LDLLVRKVLGFGYESNVKYQVVPSALQMWSTSLRD 40
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.4 bits (43), Expect = 5.6
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +2
Query: 185 TAFPPLPLVWEYDSVQIQ 238
T PP PLVW + ++
Sbjct: 335 TGTPPPPLVWRRNGADLE 352
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 21.0 bits (42), Expect = 7.4
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +3
Query: 327 YVLPHPYNVR 356
Y+LP PYN +
Sbjct: 236 YILPDPYNTK 245
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 21.0 bits (42), Expect = 7.4
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = +1
Query: 418 DWASVTQAQTPEVLQGHRLNRS 483
+W V E + GH LN+S
Sbjct: 490 EWMGVLHGDEVEYVFGHPLNKS 511
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 20.6 bits (41), Expect = 9.8
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 192 SHPFPWFGNTTVSRFRKNLAP 254
S PFP F RFR +L P
Sbjct: 150 STPFPRFIPPNAYRFRPSLNP 170
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 20.6 bits (41), Expect = 9.8
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 192 SHPFPWFGNTTVSRFRKNLAP 254
S PFP F RFR +L P
Sbjct: 150 STPFPRFIPPNAYRFRPSLNP 170
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 20.6 bits (41), Expect = 9.8
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 192 SHPFPWFGNTTVSRFRKNLAP 254
S PFP F RFR +L P
Sbjct: 150 STPFPRFIPPNAYRFRPSLNP 170
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 20.6 bits (41), Expect = 9.8
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 192 SHPFPWFGNTTVSRFRKNLAP 254
S PFP F + RFR L P
Sbjct: 155 STPFPRFISPNAYRFRPPLNP 175
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 20.6 bits (41), Expect = 9.8
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = +3
Query: 303 YYPCCDECYV 332
YY CC E Y+
Sbjct: 210 YYNCCPEPYI 219
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 20.6 bits (41), Expect = 9.8
Identities = 5/7 (71%), Positives = 6/7 (85%)
Frame = +3
Query: 297 LAYYPCC 317
+ YYPCC
Sbjct: 483 IGYYPCC 489
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 20.6 bits (41), Expect = 9.8
Identities = 5/7 (71%), Positives = 6/7 (85%)
Frame = +3
Query: 297 LAYYPCC 317
+ YYPCC
Sbjct: 536 IGYYPCC 542
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 20.6 bits (41), Expect = 9.8
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 192 SHPFPWFGNTTVSRFRKNLAP 254
S PFP F RFR +L P
Sbjct: 383 STPFPRFIPPNAYRFRPSLNP 403
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 20.6 bits (41), Expect = 9.8
Identities = 12/50 (24%), Positives = 21/50 (42%)
Frame = -2
Query: 452 SGVWAWVTLAQSVLRDQNGEAKVLGVGSRATRSYIVGVRQNVTLITTWVV 303
+GVW + A+++ E +L S SY++ + LI V
Sbjct: 783 NGVWMIIDPAKAMHHYPTREDNLLVCNSYVDASYMIAFAYPIMLIVVCTV 832
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,279
Number of Sequences: 438
Number of extensions: 5057
Number of successful extensions: 20
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14109465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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