Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_G07
(608 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 34 0.001
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 25 0.58
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 24 1.0
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 21 7.1
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 7.1
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 21 9.4
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 33.9 bits (74), Expect = 0.001
Identities = 23/71 (32%), Positives = 39/71 (54%)
Frame = +1
Query: 7 RQGYQGIPGARGMEGAPGLKGYRGDLGEPGIAISPKGQRGERGWPGIEGLKGEQGENGEF 186
+QG QG+ A+G++G G++G +G +G +G +G PG+ L+G Q G+
Sbjct: 841 QQGVQGVQTAQGVQGVQGVQGVQG----------VQGVQGVQGVPGL--LQGVQQVFGQ- 887
Query: 187 GLDGFTGPVGL 219
G+ G P G+
Sbjct: 888 GVQGMNVPYGM 898
Score = 33.9 bits (74), Expect = 0.001
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +1
Query: 4 GRQGYQGIPGARGMEGAPGLKGYRGDLGEPGIAISPKGQRGERGWPGIEGLKGEQG-ENG 180
G Q QG+ G +G++G G++G +G G PG+ + G+ G++G+ G + G
Sbjct: 846 GVQTAQGVQGVQGVQGVQGVQGVQGVQGVPGLLQGVQQVFGQ----GVQGMNVPYGMQRG 901
Query: 181 EFG 189
+ G
Sbjct: 902 QSG 904
Score = 33.1 bits (72), Expect = 0.002
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +1
Query: 463 GSIGIPGARGLQGIQGRVGLKGFEGLQG 546
G G+ A+G+QG+QG G++G +G+QG
Sbjct: 843 GVQGVQTAQGVQGVQGVQGVQGVQGVQG 870
Score = 31.9 bits (69), Expect = 0.005
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +1
Query: 319 PSDILPGERGETGFPGLDGRPGLNGMPGKFGPNGIPGKKGEIGDIGPMGSIGIPGARGLQ 498
PS + G++ ++ GL G+ G+ G+ G + G G G G+ G +G+Q
Sbjct: 819 PSSVQSGQQQQSVLQGL----GVQGVQ-----QGVQGVQTAQGVQGVQGVQGVQGVQGVQ 869
Query: 499 GIQGRVGLKGFEGLQ 543
G+QG GL +G+Q
Sbjct: 870 GVQGVPGL--LQGVQ 882
Score = 31.9 bits (69), Expect = 0.005
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +1
Query: 472 GIPGARGLQGIQGRVGLKGFEGLQG 546
G+ G +G+QG+QG G++G +G+ G
Sbjct: 852 GVQGVQGVQGVQGVQGVQGVQGVPG 876
Score = 31.5 bits (68), Expect = 0.007
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 454 GPMGSIGIPGARGLQGIQGRVGLKGFEGLQG 546
G G G +G+QG+QG G++G +G+QG
Sbjct: 843 GVQGVQTAQGVQGVQGVQGVQGVQGVQGVQG 873
Score = 28.3 bits (60), Expect = 0.062
Identities = 11/27 (40%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +1
Query: 469 IGIPGAR-GLQGIQGRVGLKGFEGLQG 546
+G+ G + G+QG+Q G++G +G+QG
Sbjct: 835 LGVQGVQQGVQGVQTAQGVQGVQGVQG 861
Score = 27.5 bits (58), Expect = 0.11
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +1
Query: 337 GERGETGFPGLDGRPGLNGMPGKFGPNGIPGKKGEIGDIGPMGSIGIPGARGLQ 498
G + G G+ G G+ G+ G G G+PG + + G G+ G+Q
Sbjct: 846 GVQTAQGVQGVQGVQGVQGVQGVQGVQGVPGLLQGVQQVFGQGVQGMNVPYGMQ 899
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 25.0 bits (52), Expect = 0.58
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 104 IAIPGSPKSPLYPFNPGAPSIPRAPGIP 21
++IP P + P N + +IPR P +P
Sbjct: 762 VSIPPPPSAQNVPQNTNSQAIPRIPILP 789
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 24.2 bits (50), Expect = 1.0
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 335 PASVVKPVFQVLMAGQDLMECQES 406
P V K ++M G+DLM C ++
Sbjct: 219 PTPVQKHALPIIMNGRDLMACAQT 242
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 21.4 bits (43), Expect = 7.1
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = +1
Query: 304 GEGLLPSDILPGERGETGFP 363
G GL P D+ +G G P
Sbjct: 330 GHGLQPPDLAGTSQGSAGLP 349
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.4 bits (43), Expect = 7.1
Identities = 11/27 (40%), Positives = 12/27 (44%), Gaps = 1/27 (3%)
Frame = +1
Query: 361 PGL-DGRPGLNGMPGKFGPNGIPGKKG 438
PG D +P L P GIPG G
Sbjct: 1117 PGTADNKPQLKPQKPFTSPGGIPGPNG 1143
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 21.0 bits (42), Expect = 9.4
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = +2
Query: 458 QWDPSEY 478
QWDP+EY
Sbjct: 83 QWDPAEY 89
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.313 0.150 0.472
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,015
Number of Sequences: 438
Number of extensions: 2782
Number of successful extensions: 19
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17971191
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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