Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_G02
         (194 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL109927-7|CAI21773.1|  390|Homo sapiens chromosome 1 open readi...    27   8.0  
AL109927-6|CAI21772.1|  643|Homo sapiens chromosome 1 open readi...    27   8.0  
AB050854-1|BAB33313.1|  349|Homo sapiens ICB-1gamma protein.           27   8.0  

>AL109927-7|CAI21773.1|  390|Homo sapiens chromosome 1 open reading
           frame 38 protein.
          Length = 390

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 36  DVTDLIAASQLGLMETSIPIVTKEDVSDIYKY 131
           D+T + A  Q  L E S+PI T E+++D + Y
Sbjct: 253 DLTVVKAKGQPDLPEGSLPIATVEELTDTFYY 284


>AL109927-6|CAI21772.1|  643|Homo sapiens chromosome 1 open reading
           frame 38 protein.
          Length = 643

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 36  DVTDLIAASQLGLMETSIPIVTKEDVSDIYKY 131
           D+T + A  Q  L E S+PI T E+++D + Y
Sbjct: 506 DLTVVKAKGQPDLPEGSLPIATVEELTDTFYY 537


>AB050854-1|BAB33313.1|  349|Homo sapiens ICB-1gamma protein.
          Length = 349

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 36  DVTDLIAASQLGLMETSIPIVTKEDVSDIYKY 131
           D+T + A  Q  L E S+PI T E+++D + Y
Sbjct: 212 DLTVVEAKGQPDLPEGSLPIATVEELTDTFYY 243


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,382,200
Number of Sequences: 237096
Number of extensions: 335167
Number of successful extensions: 834
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 834
length of database: 76,859,062
effective HSP length: 44
effective length of database: 66,426,838
effective search space used: 1328536760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)