Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_G02
         (194 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   0.58 
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    21   1.3  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    21   1.3  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    19   4.1  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    19   5.4  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    19   5.4  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       19   7.1  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    18   9.4  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 0.58
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = +3

Query: 126 KYVCTAKNAA 155
           +YVCTA+NAA
Sbjct: 655 EYVCTAENAA 664



 Score = 20.2 bits (40), Expect = 2.3
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 105 EDVSDIYKYVCTAKNA 152
           E +SD   Y C A+NA
Sbjct: 551 ERMSDQATYTCVARNA 566


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.0 bits (42), Expect = 1.3
 Identities = 15/48 (31%), Positives = 20/48 (41%)
 Frame = +3

Query: 42  TDLIAASQLGLMETSIPIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEY 185
           T L  A+Q   +  S+P V+     DI+  VC         E  LV Y
Sbjct: 280 TLLTMATQTSGINASLPPVSYTKAIDIWTGVCLTFVFGALLEFALVNY 327


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.0 bits (42), Expect = 1.3
 Identities = 15/48 (31%), Positives = 20/48 (41%)
 Frame = +3

Query: 42  TDLIAASQLGLMETSIPIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEY 185
           T L  A+Q   +  S+P V+     DI+  VC         E  LV Y
Sbjct: 280 TLLTMATQTSGINASLPPVSYTKAIDIWTGVCLTFVFGALLEFALVNY 327


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
 Frame = +3

Query: 39  VTDLIAAS-QLGLMETSIPIVTKEDVSDIYKYVCT 140
           VT L+  S Q    + S+P V+     D +  VCT
Sbjct: 281 VTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSVCT 315


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 117 DIYKYVCTAKNAAVDEEVVLVEY 185
           D Y+Y+C  +N    +   L+EY
Sbjct: 558 DAYRYLCMPEN---QDSQFLLEY 577


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 117 DIYKYVCTAKNAAVDEEVVLVEY 185
           D Y+Y+C  +N    +   L+EY
Sbjct: 558 DAYRYLCMPEN---QDSQFLLEY 577


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 173 NYLFVDRCVLGGA 135
           NYLF+   ++GGA
Sbjct: 406 NYLFLAVGIVGGA 418


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -1

Query: 131 VFINVTDVFFSDDWN 87
           V I++TD + S +W+
Sbjct: 189 VGIDLTDYYISVEWD 203


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,914
Number of Sequences: 438
Number of extensions: 636
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 44
effective length of database: 127,071
effective search space used:  2541420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)