Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_G01
(401 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 26 0.12
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 26 0.12
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 21 4.5
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 21 4.5
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 21 4.5
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 21 4.5
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 21 4.5
AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein. 21 6.0
AJ829922-1|CAH25640.1| 193|Tribolium castaneum twist bHLH trans... 21 6.0
AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxida... 20 7.9
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 26.2 bits (55), Expect = 0.12
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 68 GRYSWISLR*CQPPRSYPHKHSYSWELEINCLLL 169
G Y + +R QPP P+ H Y ++L + +LL
Sbjct: 254 GLYGSVVIR--QPPAKDPNSHLYDYDLTTHVMLL 285
Score = 21.0 bits (42), Expect = 4.5
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = -1
Query: 137 NMSVCEGSSVAVDI 96
++ VCEG V +D+
Sbjct: 175 SIQVCEGDKVVIDV 188
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 26.2 bits (55), Expect = 0.12
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 68 GRYSWISLR*CQPPRSYPHKHSYSWELEINCLLL 169
G Y + +R QPP P+ H Y ++L + +LL
Sbjct: 254 GLYGSVVIR--QPPAKDPNSHLYDYDLTTHVMLL 285
Score = 21.0 bits (42), Expect = 4.5
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = -1
Query: 137 NMSVCEGSSVAVDI 96
++ VCEG V +D+
Sbjct: 175 SIQVCEGDKVVIDV 188
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 21.0 bits (42), Expect = 4.5
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +2
Query: 236 CPPFPIYHQPTLLVVVSNICSRTRSVHQ 319
C F + L VVV N RT +H+
Sbjct: 280 CIMFMVASSVVLTVVVLNYHHRTADIHE 307
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 21.0 bits (42), Expect = 4.5
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +2
Query: 236 CPPFPIYHQPTLLVVVSNICSRTRSVHQ 319
C F + L VVV N RT +H+
Sbjct: 280 CIMFMVASSVVLTVVVLNYHHRTADIHE 307
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 21.0 bits (42), Expect = 4.5
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +2
Query: 236 CPPFPIYHQPTLLVVVSNICSRTRSVHQ 319
C F + L VVV N RT +H+
Sbjct: 280 CIMFMVASSVVLTVVVLNYHHRTADIHE 307
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 21.0 bits (42), Expect = 4.5
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +2
Query: 236 CPPFPIYHQPTLLVVVSNICSRTRSVHQ 319
C F + L VVV N RT +H+
Sbjct: 280 CIMFMVASSVVLTVVVLNYHHRTADIHE 307
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 21.0 bits (42), Expect = 4.5
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +2
Query: 236 CPPFPIYHQPTLLVVVSNICSRTRSVHQ 319
C F + L VVV N RT +H+
Sbjct: 280 CIMFMVASSVVLTVVVLNYHHRTADIHE 307
>AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein.
Length = 697
Score = 20.6 bits (41), Expect = 6.0
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = -1
Query: 185 NRFTLPATDNLSPIPRNMSVCEGSSVAVDIIVN*SSCS 72
N+ ++ + P P ++ VC G V +D++ + SS S
Sbjct: 94 NKRSIIVVNRKMPGP-SVEVCLGDEVIIDVVNHLSSDS 130
>AJ829922-1|CAH25640.1| 193|Tribolium castaneum twist bHLH
transcription factor protein.
Length = 193
Score = 20.6 bits (41), Expect = 6.0
Identities = 8/24 (33%), Positives = 11/24 (45%)
Frame = +2
Query: 191 TTTMIYPRRRSRPEICPPFPIYHQ 262
+T P E+ PPF YH+
Sbjct: 6 STEKFLPTVLPHQEVPPPFGYYHE 29
>AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxidase
subunit 2 protein.
Length = 683
Score = 20.2 bits (40), Expect = 7.9
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = +3
Query: 258 INQHCWWWSRIY 293
IN H W W +Y
Sbjct: 203 INLHHWHWHLVY 214
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,611
Number of Sequences: 336
Number of extensions: 2431
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used: 8646818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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