Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_F23
(413 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024859-3|AAK29969.2| 871|Caenorhabditis elegans Hypothetical ... 29 1.3
U10402-6|AAV34793.1| 360|Caenorhabditis elegans Tryptophanyl (w... 28 3.1
U10402-5|AAA19066.2| 650|Caenorhabditis elegans Tryptophanyl (w... 28 3.1
AB096634-1|BAC76734.1| 360|Caenorhabditis elegans tryptophanyl-... 28 3.1
Z93394-2|CAB07701.2| 251|Caenorhabditis elegans Hypothetical pr... 27 4.1
Z92817-1|CAB07296.1| 367|Caenorhabditis elegans Hypothetical pr... 27 4.1
AF099925-13|AAC69503.2| 287|Caenorhabditis elegans Hypothetical... 27 4.1
U58756-10|AAC48087.1| 310|Caenorhabditis elegans Hypothetical p... 27 7.1
U51997-5|AAG24065.1| 668|Caenorhabditis elegans Hypothetical pr... 27 7.1
AF067936-2|AAC19213.1| 527|Caenorhabditis elegans Hypothetical ... 27 7.1
Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical pr... 26 9.4
Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical pr... 26 9.4
AF099925-15|AAC69510.2| 585|Caenorhabditis elegans Calcium bind... 26 9.4
AF099925-14|AAX55690.1| 679|Caenorhabditis elegans Calcium bind... 26 9.4
AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein. 26 9.4
>AC024859-3|AAK29969.2| 871|Caenorhabditis elegans Hypothetical
protein Y71H2AM.10 protein.
Length = 871
Score = 29.1 bits (62), Expect = 1.3
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +2
Query: 47 CDCRSDIRL*WCRQESVRTSHRVISYTFNKTCRRSLFPVPATRTE-NQRYSDQRFREWLS 223
C R + W + RTS +SYT ++ C ++ +P E N R + Q+ +WL+
Sbjct: 88 CVIRIPVPFSWFPVDQNRTSVLSVSYTVSEKCDQNFHDLPQHLIEVNSRIAKQKI-DWLA 146
Query: 224 GGID 235
+
Sbjct: 147 NATE 150
>U10402-6|AAV34793.1| 360|Caenorhabditis elegans Tryptophanyl (w)
trna synthetaseprotein 2, isoform b protein.
Length = 360
Score = 27.9 bits (59), Expect = 3.1
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +2
Query: 116 ISYTFNKTCRRSLFPVPATRTENQRYSDQRFRE 214
++Y FNKT +FP+P T + RE
Sbjct: 193 LAYAFNKTYETEIFPIPKQLTRESHARIRSLRE 225
>U10402-5|AAA19066.2| 650|Caenorhabditis elegans Tryptophanyl (w)
trna synthetaseprotein 2, isoform a protein.
Length = 650
Score = 27.9 bits (59), Expect = 3.1
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +2
Query: 116 ISYTFNKTCRRSLFPVPATRTENQRYSDQRFRE 214
++Y FNKT +FP+P T + RE
Sbjct: 483 LAYAFNKTYETEIFPIPKQLTRESHARIRSLRE 515
>AB096634-1|BAC76734.1| 360|Caenorhabditis elegans
tryptophanyl-tRNA synthetase (mitochondrial)protein.
Length = 360
Score = 27.9 bits (59), Expect = 3.1
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +2
Query: 116 ISYTFNKTCRRSLFPVPATRTENQRYSDQRFRE 214
++Y FNKT +FP+P T + RE
Sbjct: 193 LAYAFNKTYETEIFPIPKQLTRESHARIRSLRE 225
>Z93394-2|CAB07701.2| 251|Caenorhabditis elegans Hypothetical
protein Y48E1C.3 protein.
Length = 251
Score = 27.5 bits (58), Expect = 4.1
Identities = 10/61 (16%), Positives = 29/61 (47%)
Frame = +3
Query: 3 FILLICVIAVVQSKSVIVGQTYDYSGVVRKVYERVIESSAIPLIKRVEEVYFQFPQPEQK 182
F+LLICV + ++I+ + + +++ + + + ++ E ++ Q + K
Sbjct: 159 FLLLICVAILDSQTNIIIDNQFGLTEILKHINDLSMHLKVDEILTAAEAIFHQLSASQNK 218
Query: 183 I 185
+
Sbjct: 219 L 219
>Z92817-1|CAB07296.1| 367|Caenorhabditis elegans Hypothetical
protein W08G11.1 protein.
Length = 367
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +2
Query: 128 FNKTCRRSLFPVPATRTENQRYSDQRFREWL 220
F +R PVP R N+ D+ F EWL
Sbjct: 75 FGYEIKRPTLPVPTLRMLNEPTCDEVFSEWL 105
>AF099925-13|AAC69503.2| 287|Caenorhabditis elegans Hypothetical
protein K01A2.1 protein.
Length = 287
Score = 27.5 bits (58), Expect = 4.1
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 330 LCCCVLFNIKVYIVPIN 380
LC C FN K++IVP N
Sbjct: 260 LCACAQFNHKLFIVPAN 276
>U58756-10|AAC48087.1| 310|Caenorhabditis elegans Hypothetical
protein F58F9.1 protein.
Length = 310
Score = 26.6 bits (56), Expect = 7.1
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 359 FYIK*NTTTQLSINFYYIFEPGSPFALQFDVNK 261
F K + + + +++ + PG PFAL FD NK
Sbjct: 178 FNFKPHGISDIHVDYCGMTLPGRPFALDFDRNK 210
>U51997-5|AAG24065.1| 668|Caenorhabditis elegans Hypothetical
protein F19G12.2 protein.
Length = 668
Score = 26.6 bits (56), Expect = 7.1
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 359 FYIK*NTTTQLSINFYYIFEPGSPFALQFDVNK 261
F K + + + +++ + PG PFAL FD NK
Sbjct: 313 FNFKPHGISDIHVDYCGMTLPGRPFALDFDRNK 345
>AF067936-2|AAC19213.1| 527|Caenorhabditis elegans Hypothetical
protein C24G6.6 protein.
Length = 527
Score = 26.6 bits (56), Expect = 7.1
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +3
Query: 96 YERVIESSAIPLIKRVEEVYFQFPQPEQKIKGI 194
Y+ +I +S++ ++K+ F P P QKI+ I
Sbjct: 281 YDYIIVTSSLGVLKKYHHKMFTPPLPRQKIEAI 313
>Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical protein
C02B4.1 protein.
Length = 1461
Score = 26.2 bits (55), Expect = 9.4
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Frame = +2
Query: 92 SVRTSHRVISYTFNKTCRRSLFPVPATRTENQRYSDQRFREW--LSGGIDQPRRIRSRLC 265
S R + S K R L P+ + +E ++ EW S RR+R+R C
Sbjct: 1010 SPRRPKLITSNDLRKAFGRPLLPIESIHSE-------KWSEWGPCSVTCGSGRRVRTRGC 1062
Query: 266 *HQTEERKGIRVQICSRNLCLTVLL 340
+ + I+ + C+ N CL + +
Sbjct: 1063 QEASCPEQHIQTEECNLNSCLELFI 1087
>Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical protein
C02B4.1 protein.
Length = 1461
Score = 26.2 bits (55), Expect = 9.4
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Frame = +2
Query: 92 SVRTSHRVISYTFNKTCRRSLFPVPATRTENQRYSDQRFREW--LSGGIDQPRRIRSRLC 265
S R + S K R L P+ + +E ++ EW S RR+R+R C
Sbjct: 1010 SPRRPKLITSNDLRKAFGRPLLPIESIHSE-------KWSEWGPCSVTCGSGRRVRTRGC 1062
Query: 266 *HQTEERKGIRVQICSRNLCLTVLL 340
+ + I+ + C+ N CL + +
Sbjct: 1063 QEASCPEQHIQTEECNLNSCLELFI 1087
>AF099925-15|AAC69510.2| 585|Caenorhabditis elegans Calcium binding
protein homologprotein 1, isoform a protein.
Length = 585
Score = 26.2 bits (55), Expect = 9.4
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 111 ESSAIPLIKRVEEVYFQFPQPEQKIKGIAIKDLENGLA 224
E++ P EEV +P+QK+K + + +L +G+A
Sbjct: 498 ETTITPTTTVPEEVTVTTKKPKQKLKPVEVAELIDGIA 535
>AF099925-14|AAX55690.1| 679|Caenorhabditis elegans Calcium binding
protein homologprotein 1, isoform d protein.
Length = 679
Score = 26.2 bits (55), Expect = 9.4
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 111 ESSAIPLIKRVEEVYFQFPQPEQKIKGIAIKDLENGLA 224
E++ P EEV +P+QK+K + + +L +G+A
Sbjct: 498 ETTITPTTTVPEEVTVTTKKPKQKLKPVEVAELIDGIA 535
>AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein.
Length = 1461
Score = 26.2 bits (55), Expect = 9.4
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Frame = +2
Query: 92 SVRTSHRVISYTFNKTCRRSLFPVPATRTENQRYSDQRFREW--LSGGIDQPRRIRSRLC 265
S R + S K R L P+ + +E ++ EW S RR+R+R C
Sbjct: 1010 SPRRPKLITSNDLRKAFGRPLLPIESIHSE-------KWSEWGPCSVTCGSGRRVRTRGC 1062
Query: 266 *HQTEERKGIRVQICSRNLCLTVLL 340
+ + I+ + C+ N CL + +
Sbjct: 1063 QEASCPEQHIQTEECNLNSCLELFI 1087
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,964,659
Number of Sequences: 27780
Number of extensions: 174657
Number of successful extensions: 429
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 426
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 429
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 673122114
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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