Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_F22
(652 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0042 + 295608-296222,298479-298925 186 2e-47
06_01_0033 - 346273-347355 165 4e-41
04_04_0775 - 27989704-27990281,27990407-27990653,27990743-279908... 31 0.80
12_01_0830 - 7678038-7678444,7678996-7680943,7681231-7681983,768... 29 3.2
08_02_1600 + 28133818-28133900,28134240-28134345,28135169-281352... 29 3.2
02_05_0481 + 29361542-29361669,29362091-29362341,29362820-293630... 29 3.2
09_06_0140 + 21090686-21091645,21092142-21092221,21092705-210929... 28 5.6
05_03_0502 - 14754532-14754851,14754959-14755042,14755553-147557... 28 5.6
12_01_0054 + 463743-464414,464896-465024,465336-465440,465524-46... 27 9.8
11_01_0054 + 416626-417297,417757-417885,418197-418301,418385-41... 27 9.8
06_03_1318 - 29282562-29282566,29282727-29282810,29282913-292833... 27 9.8
06_01_0649 + 4698384-4698780,4699047-4699144,4699673-4699697,469... 27 9.8
03_05_0930 + 28908216-28908587 27 9.8
01_06_1330 - 36361275-36361448,36361778-36361973,36362248-363623... 27 9.8
>02_01_0042 + 295608-296222,298479-298925
Length = 353
Score = 186 bits (452), Expect = 2e-47
Identities = 92/182 (50%), Positives = 120/182 (65%), Gaps = 2/182 (1%)
Frame = +2
Query: 2 DILTYVTWKISGLPKHRVIGSGTNLDSARFRYLLSERLGIATTSCHGYIIGEHGDSSVPV 181
D+LTYV WK+SG P RVIGSGTNLDS+RFR+LL+E L + Y++GEHGDSSV +
Sbjct: 160 DVLTYVAWKLSGFPASRVIGSGTNLDSSRFRFLLAEHLQVNAQDVQAYMVGEHGDSSVAI 219
Query: 182 WSGVNIAGVRLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLV 361
WS +++AG+ + ++ D E + + VV SAYEVI LKGYTSWAIG S++ L
Sbjct: 220 WSSMSVAGMPVLKSLRESHQSFDEEALEGIRRAVVDSAYEVISLKGYTSWAIGYSVASLA 279
Query: 362 RAILYNANSVHAVSTYLKGEHGI--DEEVFLSLPCVLGHSGVSDVIRQPLTETELAQLRK 535
++L + + +H VS G HGI D EVFLSLP LG +GV V LTE E +LR+
Sbjct: 280 ASLLRDQHRIHPVSVLASGFHGIPQDHEVFLSLPARLGRAGVLGVAEMELTEEEARRLRR 339
Query: 536 SA 541
SA
Sbjct: 340 SA 341
>06_01_0033 - 346273-347355
Length = 360
Score = 165 bits (400), Expect = 4e-41
Identities = 90/190 (47%), Positives = 123/190 (64%), Gaps = 10/190 (5%)
Frame = +2
Query: 2 DILTYVTWKISGLPKHRVIGSGTNLDSARFRYLLSERLGIATTSCHGYIIGEHGDSSVPV 181
D+LTYV WK+SG P RVIGSGTNLDS+RFR+LL+E L ++ Y++GEHGDSSV +
Sbjct: 159 DVLTYVAWKLSGFPASRVIGSGTNLDSSRFRFLLAEHLEVSAQDVQAYMVGEHGDSSVAL 218
Query: 182 WSGVNIAGVR-LSDLNKKIGTDSDPENWKE-----LHEMVVKSAYEVIKLKGYTSWAIGL 343
WS +++ G+ L+ L K + + + + E + VV SAYEVIKLKGYTSWAIG
Sbjct: 219 WSSISVGGMPVLAHLQKNHRSAATAKKFDEAALEGIRRAVVGSAYEVIKLKGYTSWAIGY 278
Query: 344 SLSQLVRAILYNANSVHAVSTYLKG-EHGI--DEEVFLSLPCVLGHSGVSDVIRQ-PLTE 511
S++ + ++L + +H VS KG G+ D E+FLSLP LG +GV V + LT+
Sbjct: 279 SVASIAWSLLRDQRRIHPVSVLAKGLVRGVPADRELFLSLPARLGRAGVLGVAAELVLTD 338
Query: 512 TELAQLRKSA 541
E +LR SA
Sbjct: 339 EEERRLRISA 348
>04_04_0775 -
27989704-27990281,27990407-27990653,27990743-27990837,
27990918-27992388,27993142-27993194,27993295-27993430
Length = 859
Score = 31.1 bits (67), Expect = 0.80
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = -1
Query: 472 VAQNTRKGQEHFFVNSMFTLEISRYSVNTVSIVQYSADQLGQRK----SDSPRGVS 317
+A++ ++ + +NS+ E+S+YSV D+L R+ +DSPRGVS
Sbjct: 250 LAEDDKQTKSKVTINSLEQSEVSKYSVQKTHNFFLKEDKLVMRRPPKLNDSPRGVS 305
>12_01_0830 -
7678038-7678444,7678996-7680943,7681231-7681983,
7682701-7682824,7683590-7683723
Length = 1121
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = -2
Query: 255 SGSESVPIFLFKSLSRTPAIFTPDHTGTLLSPCSPIIYPWQEVVAMPN 112
+G PI+ ++ + T A+FT +H G+ S I W A+ N
Sbjct: 817 NGDGCHPIYSLETSALTAAVFTEEHDGSFKEALSSAIECWSVAQAIVN 864
>08_02_1600 +
28133818-28133900,28134240-28134345,28135169-28135255,
28135354-28135438,28135510-28135691,28135921-28135991,
28136078-28136168,28136250-28136324,28136436-28136537,
28136620-28136742,28136823-28136891,28136990-28137058,
28137158-28137211,28137315-28137368
Length = 416
Score = 29.1 bits (62), Expect = 3.2
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 7/170 (4%)
Frame = +2
Query: 68 TNLDSARFRYLLSERLGIATTSCHGYII-GEHGDSSVPVWSGVNIAGVRLSDLNKKIGTD 244
T LD R + L+ + G+ I G H + VP + I G + ++ K
Sbjct: 225 TRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNAKINGRPVKEVIKDTKWL 284
Query: 245 SDPENWKELHEMVVKSAYEVIKLKGYTSWA-IGLSLSQLVRAILYNANSVHAVST--YLK 415
D E + V K +I+ G +S A +S+ +R+++ ST Y
Sbjct: 285 ED-----EFTKTVQKRGGVLIQKWGRSSAASTAVSIVDAIRSLVNPTPEGDWFSTGVYTT 339
Query: 416 GE-HGIDEEVFLSLPCVLGHSGVSDVIRQPLTETEL-AQLRKS-ATLMAK 556
G +GI E++ S+PC G ++++ + L +++KS A L+A+
Sbjct: 340 GNPYGIAEDIVFSMPCRSKGDGDYELVKDVAMDDFLWERIKKSEAELLAE 389
>02_05_0481 +
29361542-29361669,29362091-29362341,29362820-29363002,
29363099-29363206,29363583-29363697,29363781-29364819,
29364904-29365014,29365268-29365326,29366601-29366763,
29367162-29367435,29367530-29367680,29367766-29367877,
29367978-29368143,29368261-29368331,29368474-29368565,
29368721-29368883,29369134-29369205,29369236-29369263,
29369519-29369910,29369991-29370106,29370201-29370498,
29370820-29371139,29371332-29371590,29371985-29372302,
29372423-29372527,29372648-29372776,29374001-29374381,
29374467-29374604,29374949-29375185,29375264-29375569
Length = 2094
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = -1
Query: 208 NSGNIYAGPHGNTAITMFSNN 146
+SG++ AGPHGN +M+ +N
Sbjct: 332 SSGSVEAGPHGNATDSMYRSN 352
>09_06_0140 +
21090686-21091645,21092142-21092221,21092705-21092906,
21093052-21093327,21093414-21093482,21093638-21093785,
21094080-21094228,21094897-21095061,21095623-21095732,
21095868-21095946,21095947-21096240
Length = 843
Score = 28.3 bits (60), Expect = 5.6
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Frame = +2
Query: 218 DLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLV-RAILYNANSVH 394
D++ ++ + DPENW H V +S + LKG+ S S L+ R L S+H
Sbjct: 489 DISLRVSKEEDPENW---HVQVFRS-IDSGSLKGFPSDCKEASKQNLICRKDLIIDKSIH 544
Query: 395 AVSTYLKGEHGIDEEVFLSLPCVLGHS 475
+ Y++ +++ LG S
Sbjct: 545 --TAYVRAIRSAQHFIYIENQYFLGSS 569
>05_03_0502 -
14754532-14754851,14754959-14755042,14755553-14755709,
14756198-14756638,14757590-14757808,14757873-14758193
Length = 513
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -1
Query: 376 VQYSADQLGQRKSDSPRGVSFQFDH 302
VQY D+LG+R++ +P G F+H
Sbjct: 430 VQYHRDRLGRRQAAAPEGREEHFNH 454
>12_01_0054 +
463743-464414,464896-465024,465336-465440,465524-465917,
466325-466422,466505-466753,466920-466979
Length = 568
Score = 27.5 bits (58), Expect = 9.8
Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Frame = +2
Query: 74 LDSARFRYLLSERLGIATTSCHGYIIGEHGDSSVPVWSGVNIAGVRLSDLNK--KIGTDS 247
LD R + L TTSC I S+ G+ + G R + L + TD
Sbjct: 371 LDVTCCRKITDVSLAAITTSCPSLISLRMESCSLVSSKGLQLIGRRCTHLEELDLTDTDL 430
Query: 248 DPENWKELHEMVVKSAYEV 304
D E + L ++ +K +E+
Sbjct: 431 DDEGCRLLSKLDIKKCFEI 449
>11_01_0054 +
416626-417297,417757-417885,418197-418301,418385-418778,
419186-419283,419366-419614,419784-419843
Length = 568
Score = 27.5 bits (58), Expect = 9.8
Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Frame = +2
Query: 74 LDSARFRYLLSERLGIATTSCHGYIIGEHGDSSVPVWSGVNIAGVRLSDLNK--KIGTDS 247
LD R + L TTSC I S+ G+ + G R + L + TD
Sbjct: 371 LDVTCCRKITDVSLAAITTSCPSLISLRMESCSLVSSKGLQLIGRRCTHLEELDLTDTDL 430
Query: 248 DPENWKELHEMVVKSAYEV 304
D E + L ++ +K +E+
Sbjct: 431 DDEGCRLLSKLDIKKCFEI 449
>06_03_1318 - 29282562-29282566,29282727-29282810,29282913-29283380,
29283735-29283917,29284362-29284467,29284627-29284651,
29284736-29284855,29284920-29284997,29285646-29285774,
29285976-29285989,29286168-29287944,29288344-29288489,
29288921-29291029
Length = 1747
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +2
Query: 284 VKSAYEVIKLKGYTS-WAIGLSLSQLVRAILYNANSVHAVSTYL 412
V+S ++ L G T W +G+ + +V + ++ +SVH +T +
Sbjct: 997 VRSFVSLLALSGKTGDWQLGVQIHGIVHKLGFSCSSVHVQTTLI 1040
>06_01_0649 +
4698384-4698780,4699047-4699144,4699673-4699697,
4699809-4699929,4700022-4700156,4700392-4700602
Length = 328
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +1
Query: 49 SRDRLWNQS*FCKIPLPALREVGHRNYFLPWI--YY 150
+RD L N S FC + + R+ +N+ L WI YY
Sbjct: 197 ARDALQNLSSFCSLSVVTSRQDAIKNHTLDWIDKYY 232
>03_05_0930 + 28908216-28908587
Length = 123
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +2
Query: 440 VFLSLPCVLGHSGVSDVIRQPLTETELAQLRKSATLMAKVQADIKVLIIRRLHCP 604
+FL++ V H+GV+ + P + T SA KV AD+ VL+ +++ P
Sbjct: 10 IFLAVNLVALHAGVARGQQSPPSSTRGNPCPTSALADLKVCADVLVLLKLKINVP 64
>01_06_1330 -
36361275-36361448,36361778-36361973,36362248-36362325,
36362685-36362807,36363206-36363463,36363914-36364073,
36364702-36364812,36365159-36365429,36365514-36365663,
36366383-36367090
Length = 742
Score = 27.5 bits (58), Expect = 9.8
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = +2
Query: 242 DSDPENWKELHEMVVKSAYEVIKLKGY 322
++ E WKE+ + + +E++K +GY
Sbjct: 406 EAQQEAWKEMEDFTARLCWELVKKEGY 432
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,557,437
Number of Sequences: 37544
Number of extensions: 376115
Number of successful extensions: 987
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 984
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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