Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_F22
(652 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_10613| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.47
SB_29696| Best HMM Match : Herpes_US9 (HMM E-Value=0.56) 31 0.62
SB_14193| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_1434| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_7269| Best HMM Match : DUF1279 (HMM E-Value=0.19) 30 1.9
SB_36921| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_33374| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_22292| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_5649| Best HMM Match : DUF1212 (HMM E-Value=2.6) 30 1.9
SB_33739| Best HMM Match : Shugoshin_N (HMM E-Value=1.3) 29 2.5
SB_14179| Best HMM Match : E-MAP-115 (HMM E-Value=2.8) 29 2.5
SB_56090| Best HMM Match : BenE (HMM E-Value=0.2) 29 3.3
SB_40357| Best HMM Match : GLYCAM-1 (HMM E-Value=1.1) 29 3.3
SB_1332| Best HMM Match : FeoB_N (HMM E-Value=0.94) 29 3.3
SB_58835| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_54541| Best HMM Match : bZIP_1 (HMM E-Value=1.9) 29 4.3
SB_28291| Best HMM Match : DUF1131 (HMM E-Value=2.3) 29 4.3
SB_13335| Best HMM Match : DUF1279 (HMM E-Value=0.43) 29 4.3
SB_472| Best HMM Match : Cas1p (HMM E-Value=0) 29 4.3
SB_22144| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_370| Best HMM Match : DUF1279 (HMM E-Value=0.35) 29 4.3
SB_58632| Best HMM Match : Flp_Fap (HMM E-Value=1.1) 28 5.7
SB_48040| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_37465| Best HMM Match : UPF0075 (HMM E-Value=1.2) 28 5.7
SB_35158| Best HMM Match : GLYCAM-1 (HMM E-Value=1.3) 28 5.7
SB_27942| Best HMM Match : GLYCAM-1 (HMM E-Value=1.3) 28 5.7
SB_21816| Best HMM Match : DUF1279 (HMM E-Value=1.1) 28 5.7
SB_19033| Best HMM Match : GLYCAM-1 (HMM E-Value=1.8) 28 5.7
SB_15806| Best HMM Match : GLYCAM-1 (HMM E-Value=1.3) 28 5.7
SB_13304| Best HMM Match : IncA (HMM E-Value=0.3) 28 5.7
SB_9869| Best HMM Match : E-MAP-115 (HMM E-Value=2.8) 28 5.7
SB_1253| Best HMM Match : TraD (HMM E-Value=1.5) 28 5.7
SB_53706| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_22791| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_21175| Best HMM Match : GLYCAM-1 (HMM E-Value=1) 28 5.7
SB_16679| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_15367| Best HMM Match : DUF1212 (HMM E-Value=0.98) 28 5.7
SB_10025| Best HMM Match : GLYCAM-1 (HMM E-Value=1.3) 28 5.7
SB_3529| Best HMM Match : T-box (HMM E-Value=0) 28 5.7
SB_55885| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_54551| Best HMM Match : DUF1515 (HMM E-Value=2.5) 28 7.6
SB_52973| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_42844| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_39573| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_38193| Best HMM Match : DUF1279 (HMM E-Value=4.5) 28 7.6
SB_15621| Best HMM Match : DUF1279 (HMM E-Value=1.7) 28 7.6
SB_14512| Best HMM Match : IncA (HMM E-Value=0.12) 28 7.6
SB_10796| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_53864| Best HMM Match : Herpes_US9 (HMM E-Value=2) 28 7.6
SB_50868| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_50141| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_48416| Best HMM Match : DUF1279 (HMM E-Value=1.7) 28 7.6
SB_37967| Best HMM Match : DUF1279 (HMM E-Value=0.28) 28 7.6
SB_25594| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_25475| Best HMM Match : DUF1279 (HMM E-Value=0.63) 28 7.6
SB_19210| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_3882| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_2285| Best HMM Match : IncA (HMM E-Value=3.2) 28 7.6
>SB_10613| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 31.9 bits (69), Expect = 0.47
Identities = 18/55 (32%), Positives = 32/55 (58%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAIL 373
RLS++++ + +PEN K L E + + K G+T AIGL+++ + AI+
Sbjct: 199 RLSEIDELERENGEPENQKPLRERI----KAIFKKYGFTVTAIGLAVATTIAAIV 249
>SB_29696| Best HMM Match : Herpes_US9 (HMM E-Value=0.56)
Length = 632
Score = 31.5 bits (68), Expect = 0.62
Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAILYN-AN 385
RLS++++ + EN K L E + + K G+T AIGL+++ + AI+ + A
Sbjct: 187 RLSEIDELERESQELENQKPLRERIKA----IFKKYGFTVTAIGLAVATTIAAIVTSLAK 242
Query: 386 SVHAVSTYL-KGEHGIDEEVFLSLP 457
S+ +V+ + G I +++F LP
Sbjct: 243 SLSSVARGVGNGLEAIGKKLFERLP 267
>SB_14193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/77 (28%), Positives = 44/77 (57%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAILYNANS 388
RLS++++ + + EN K L E + K+ +E G+T AIGL+L+ + AI+ +
Sbjct: 52 RLSEIDELERENRELENQKPLRERI-KAIFEKY---GFTVTAIGLALATTIAAIVTSLGK 107
Query: 389 VHAVSTYLKGEHGIDEE 439
++S+ +G + ++ E
Sbjct: 108 --SLSSVAEGWYNLERE 122
>SB_1434| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 416
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/55 (32%), Positives = 32/55 (58%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAIL 373
RLS+++K + + EN K L E + + K G+T+ AIGL+++ + AI+
Sbjct: 119 RLSEIDKLERENRELENQKPLRERIKA----IFKKHGFTATAIGLAVATTIAAIV 169
>SB_7269| Best HMM Match : DUF1279 (HMM E-Value=0.19)
Length = 298
Score = 29.9 bits (64), Expect = 1.9
Identities = 25/89 (28%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAILYN-AN 385
RLS++++ + + EN K L E + + K G+T AIGL+++ + AI+ +
Sbjct: 171 RLSEIDELERKNREFENQKPLRERIKT----IFKKYGFTVTAIGLAVATTIAAIVTSLGK 226
Query: 386 SVHAVSTYLKGE-HGIDEEVFLSLPCVLG 469
S+ +V+ + E I+E++ LP ++G
Sbjct: 227 SLSSVARGVGNELKAIEEKLGELLPGLVG 255
>SB_36921| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 199
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 116 GIATTSCHGYIIGEHGDSSVPVWS 187
G++TT C ++ HGD+ P+WS
Sbjct: 26 GVSTTRC-STVVARHGDTVFPIWS 48
>SB_33374| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4475
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 283 SEERL*SDQTERIHLVGYRTFVVPAGPRY 369
+++R S E++H GYRT+VV G RY
Sbjct: 3175 NQKRPLSTAAEQLHRHGYRTYVVGVGDRY 3203
>SB_22292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1047
Score = 29.9 bits (64), Expect = 1.9
Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 4/112 (3%)
Frame = +2
Query: 212 LSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLS----QLVRAILYN 379
LS L + D EN + H +V+ +++ KG S+ +GL ++ Q +R +L +
Sbjct: 272 LSKLPSLLSQDLQ-ENRHDRHLVVISRKQQLLVQKG-VSYQMGLKMADSHVQKIRDLLSS 329
Query: 380 ANSVHAVSTYLKGEHGIDEEVFLSLPCVLGHSGVSDVIRQPLTETELAQLRK 535
+ TY H I E+ + H+G++ VI + L + K
Sbjct: 330 KAPLITFGTYNYKHHEILEDSVSQAMYLFAHNGLTQVIDSAMKYHNLPSILK 381
>SB_5649| Best HMM Match : DUF1212 (HMM E-Value=2.6)
Length = 293
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/55 (32%), Positives = 32/55 (58%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAIL 373
RLS++++ + + EN K L E + E+ K G+T AIGL+++ + AI+
Sbjct: 195 RLSEIDELERENRELENQKPLRERIK----EIFKKYGFTVTAIGLAVATTIAAIV 245
>SB_33739| Best HMM Match : Shugoshin_N (HMM E-Value=1.3)
Length = 247
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAILYN-AN 385
RLS++++ + + EN K L E + + K G+T AIGL+++ + AI+ +
Sbjct: 184 RLSEIDELESENRELENRKPLRERIKA----IFKKYGFTVTAIGLAVATTIAAIVTSLGK 239
Query: 386 SVHAVSTY 409
S+ +V+ Y
Sbjct: 240 SLSSVARY 247
>SB_14179| Best HMM Match : E-MAP-115 (HMM E-Value=2.8)
Length = 313
Score = 29.5 bits (63), Expect = 2.5
Identities = 25/95 (26%), Positives = 46/95 (48%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAILYNANS 388
RLS++++ + + EN K L E + + K G+T+ AIGL+++ + AI+ +
Sbjct: 153 RLSEIDELERENREHENQKPLRERMKA----IFKKYGFTATAIGLAVATTIAAIVTSLGK 208
Query: 389 VHAVSTYLKGEHGIDEEVFLSLPCVLGHSGVSDVI 493
++S+ +G CV HS S V+
Sbjct: 209 --SLSSVARGVGRRRSGEIPWRKCVAAHSSRSRVL 241
>SB_56090| Best HMM Match : BenE (HMM E-Value=0.2)
Length = 520
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAIL 373
RLS+++++ + + EN K L E + + K G+T AIGL+++ + AI+
Sbjct: 151 RLSEIDERERENRELENQKPLRERIKA----IFKKYGFTVTAIGLAVATTIAAIV 201
>SB_40357| Best HMM Match : GLYCAM-1 (HMM E-Value=1.1)
Length = 322
Score = 29.1 bits (62), Expect = 3.3
Identities = 24/89 (26%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAILYN-AN 385
RLS++++ + + EN K L E + + K G+T+ AIGL+++ + AI+ +
Sbjct: 195 RLSEIDELERENRELENQKPLREHIKA----IFKKYGFTATAIGLAVATTIAAIVTSLGK 250
Query: 386 SVHAVSTYL-KGEHGIDEEVFLSLPCVLG 469
S+ +V+ + G I +++ LP ++G
Sbjct: 251 SLSSVARGVGNGPKAIGKKLGELLPGLVG 279
>SB_1332| Best HMM Match : FeoB_N (HMM E-Value=0.94)
Length = 348
Score = 29.1 bits (62), Expect = 3.3
Identities = 26/102 (25%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAILYN-AN 385
RLS++++ + + EN K L E + + K G+T AIGL+++ + AI+ +
Sbjct: 195 RLSEIDELERENRELENQKPLRERIKA----IFKKYGFTVTAIGLAVATTIAAIVTSLGK 250
Query: 386 SVHAVSTYL-KGEHGIDEEVFLSLPCVLGHSGVSDVIRQPLT 508
++ +V+ + G I +++ LP ++G +++ + PLT
Sbjct: 251 TLSSVARGVGNGLKAIGKKLGELLPGLVG--SIANFVFNPLT 290
>SB_58835| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 294
Score = 28.7 bits (61), Expect = 4.3
Identities = 24/89 (26%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAILYN-AN 385
R+S++++ + + EN K L E + + K G+T AIGL+++ + AI+ +
Sbjct: 167 RISEIDELERENRELENQKPLRERIKA----IFKKYGFTVTAIGLAVATTIAAIVTSLGK 222
Query: 386 SVHAVSTYLK-GEHGIDEEVFLSLPCVLG 469
S+ +V+ ++ G I +E+ LP ++G
Sbjct: 223 SLSSVARGVRNGLKAIRKELGELLPGLVG 251
>SB_54541| Best HMM Match : bZIP_1 (HMM E-Value=1.9)
Length = 294
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAIL 373
RLS++++ + + EN K L E + + K G+T+ AIGL+++ + AI+
Sbjct: 196 RLSEIDELERENRELENQKPLRERIKA----IFKKYGFTTTAIGLAVATTIAAIV 246
>SB_28291| Best HMM Match : DUF1131 (HMM E-Value=2.3)
Length = 421
Score = 28.7 bits (61), Expect = 4.3
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Frame = +2
Query: 113 LGIATTSCHGYIIGEHGDSSVPVWSGVNIAGVRLSDLNKKIGTDSDPENWKELHEMVVKS 292
+G A + I+ G S V GV G L + KK+G + P + V K+
Sbjct: 332 IGFAVATTIAAIVTSLGKSLSSVARGV---GNGLQAIGKKLG-ELLPGLVGSIANFVFKA 387
Query: 293 AYEVIKLKGYTSWAIGLSLSQ-LVRAILYN 379
A EV+K G +W + L+++ LVR + N
Sbjct: 388 AGEVVKFLGENAWLLILAVAAFLVRRMQSN 417
>SB_13335| Best HMM Match : DUF1279 (HMM E-Value=0.43)
Length = 319
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAIL 373
RLS++++ + + EN K+L E + + K G+T AIGL+++ + AI+
Sbjct: 192 RLSEIDELERENRELENQKQLRERIKA----IFKKYGFTVTAIGLAVATTIAAIV 242
>SB_472| Best HMM Match : Cas1p (HMM E-Value=0)
Length = 932
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAIL 373
RLS++++ + + EN K L E + + K+ G+T AIGL+++ + AI+
Sbjct: 195 RLSEIDELERENRELENRKPLRERIKA----IFKMYGFTVTAIGLAVATTIAAIV 245
>SB_22144| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/61 (29%), Positives = 34/61 (55%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAILYNANS 388
RLS++++ + + EN K L E + + K G+T AIG +++ + AI+ + +S
Sbjct: 495 RLSEIDELERENRELENQKPLRERIKA----IFKKYGFTVTAIGFAVATTIAAIVTSLSS 550
Query: 389 V 391
V
Sbjct: 551 V 551
>SB_370| Best HMM Match : DUF1279 (HMM E-Value=0.35)
Length = 322
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAIL 373
RLS++++ + + EN K L E + ++ K G+T AIGL+++ + AI+
Sbjct: 195 RLSEIDELERENRELENQKPLRERIK----DIFKKYGFTVTAIGLAVATTIAAIV 245
>SB_58632| Best HMM Match : Flp_Fap (HMM E-Value=1.1)
Length = 297
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAIL 373
RLS++++ + + EN K L E + + K G+T+ AIGL+++ + AI+
Sbjct: 170 RLSEIDELERENRELENRKPLRERIKA----IFKKYGFTATAIGLAVATTIAAIV 220
>SB_48040| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 302
Score = 28.3 bits (60), Expect = 5.7
Identities = 20/70 (28%), Positives = 39/70 (55%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAILYNANS 388
RLS++++ + + EN K L E + + K G+T AIGL+++ + AI+ +
Sbjct: 97 RLSEIDELERENRELENQKPLRERIKA----IFKKYGFTVTAIGLAVATTIAAIV--TSL 150
Query: 389 VHAVSTYLKG 418
V ++S+ +G
Sbjct: 151 VKSLSSVARG 160
>SB_37465| Best HMM Match : UPF0075 (HMM E-Value=1.2)
Length = 336
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAIL 373
RLS++++ + + EN K L E + + K G+T+ AIGL+++ + AI+
Sbjct: 195 RLSEIDELKRENRELENQKPLREHIKA----IFKKYGFTATAIGLAVATTIAAIV 245
>SB_35158| Best HMM Match : GLYCAM-1 (HMM E-Value=1.3)
Length = 322
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAIL 373
RLS++++ + + EN K L E + + K G+T+ AIGL+++ + AI+
Sbjct: 195 RLSEIDELERENRELENQKPLREHIKA----IFKKYGFTATAIGLAVATTIAAIV 245
>SB_27942| Best HMM Match : GLYCAM-1 (HMM E-Value=1.3)
Length = 322
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAIL 373
RLS++++ + + EN K L E + + K G+T+ AIGL+++ + AI+
Sbjct: 195 RLSEIDELERENRELENQKPLREHIKA----IFKKYGFTATAIGLAVATTIAAIV 245
>SB_21816| Best HMM Match : DUF1279 (HMM E-Value=1.1)
Length = 894
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAIL 373
RLS+++K + EN K L E + + K G+T AIGL+++ + AI+
Sbjct: 346 RLSEIDKLEREKRELENQKPLRERIKA----IFKKYGFTITAIGLAVATTIAAIV 396
>SB_19033| Best HMM Match : GLYCAM-1 (HMM E-Value=1.8)
Length = 311
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAIL 373
RLS++++ + + EN K L E + + K G+T+ AIGL+++ + AI+
Sbjct: 195 RLSEIDELERENRELENQKPLREHIKA----IFKKYGFTATAIGLAVATTIAAIV 245
>SB_15806| Best HMM Match : GLYCAM-1 (HMM E-Value=1.3)
Length = 322
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAIL 373
RLS++++ + + EN K L E + + K G+T+ AIGL+++ + AI+
Sbjct: 195 RLSEIDELKRENRELENQKPLREHIKA----IFKKYGFTATAIGLAVATTIAAIV 245
>SB_13304| Best HMM Match : IncA (HMM E-Value=0.3)
Length = 611
Score = 28.3 bits (60), Expect = 5.7
Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAILYN-AN 385
RLS++ + + + EN K L E + + K G+T+ AIGL+++ + AI+ +
Sbjct: 52 RLSEIGELERGNRELENRKPLRERIKA----IFKKYGFTATAIGLAVATTIAAIVTSLGK 107
Query: 386 SVHAVSTYLKGEHGIDEEVFLSLPCVLG 469
S+ + G I +++ LP ++G
Sbjct: 108 SLSSARGVGNGLKAIGKKLGELLPWLVG 135
>SB_9869| Best HMM Match : E-MAP-115 (HMM E-Value=2.8)
Length = 260
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAIL 373
RLS++++ + + EN K L E + + K G+T+ AIGL+++ + AI+
Sbjct: 195 RLSEIDELERENRELENQKPLREHIKA----IFKKYGFTATAIGLAVATTIAAIV 245
>SB_1253| Best HMM Match : TraD (HMM E-Value=1.5)
Length = 213
Score = 28.3 bits (60), Expect = 5.7
Identities = 20/70 (28%), Positives = 38/70 (54%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAILYNANS 388
RLS++++ + + EN K L E + + K G+T AIGL+++ + AI+ +
Sbjct: 145 RLSEIDELESENRELENRKPLRERIKA----IFKKYGFTVTAIGLAVATTIAAIVTSLG- 199
Query: 389 VHAVSTYLKG 418
++S+ KG
Sbjct: 200 -RSLSSVAKG 208
>SB_53706| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1172
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAIL 373
RLS++++ + + EN K L E + + K G+T AIGL+++ + AI+
Sbjct: 935 RLSEIDELESENRELENQKPLRERIKA----IFKKYGFTVTAIGLAVATTIAAIV 985
>SB_22791| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1798
Score = 28.3 bits (60), Expect = 5.7
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = -2
Query: 651 IDTDHHSDHTIKLDYHGQCNLRIIKTLISA*TFAIRVADLRN*ASSVSVRG*R-ITSDTP 475
ID +H H I + YH + N+RI I+ + V LRN + + R + D P
Sbjct: 1347 IDITYHKRHNIDIMYHKRHNIRIWVVYITLYSVENSVCVLRNLSYRLEDEIDRELHPDAP 1406
Query: 474 LWPKTQGRDRNTSSSIP 424
L + + +D+ S P
Sbjct: 1407 LPNEEKKKDKVASEHPP 1423
>SB_21175| Best HMM Match : GLYCAM-1 (HMM E-Value=1)
Length = 280
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAIL 373
RLS++++ + + EN K L E + + K G+T+ AIGL+++ + AI+
Sbjct: 153 RLSEIDELERENRELENQKPLREHIKA----IFKKYGFTATAIGLAVATTIAAIV 203
>SB_16679| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 28.3 bits (60), Expect = 5.7
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +2
Query: 74 LDSARFRYLLSERLGIATTSCHGYIIGEHGDSSVPVWSGV---NIAGVRLSDLNKKIGTD 244
LDSA + ++ R + TTS + GDSS PV ++LSDL+ GTD
Sbjct: 50 LDSANQQLVVGARRNVITTS--SFCSHTKGDSS-PVEPNAYTPTCKWIKLSDLSPASGTD 106
Query: 245 SDPENWKE 268
S+ ++E
Sbjct: 107 SNGNVFRE 114
>SB_15367| Best HMM Match : DUF1212 (HMM E-Value=0.98)
Length = 286
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAIL 373
RLS++++ + + EN K L E + + K G+T AIGL+++ + AI+
Sbjct: 195 RLSEIDELERENRELENQKSLRERIKA----IFKKHGFTVTAIGLAVAATIAAIV 245
>SB_10025| Best HMM Match : GLYCAM-1 (HMM E-Value=1.3)
Length = 517
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAIL 373
RLS++++ + + EN K L E + + K G+T+ AIGL+++ + AI+
Sbjct: 195 RLSEIDELERENRELENQKPLREHIKA----IFKKYGFTATAIGLAVATTIAAIV 245
>SB_3529| Best HMM Match : T-box (HMM E-Value=0)
Length = 512
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +2
Query: 431 DEEVFLSLPCVLGHSGVSDVIRQPLTETELAQLRKSATLMAKVQADIKV 577
D+EV + PC LG ++ R P E+A R S+ +A V+ ++++
Sbjct: 85 DDEVDPTSPCALGAGSPGNMSRSPC--AEVANQRGSSRCLAHVRVELEM 131
>SB_55885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 301
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAIL 373
RLS++++ + + EN K L E + V K G+T AIGL+++ + AI+
Sbjct: 183 RLSEIDELERENRELENQKPLRERIKA----VFKKYGFTVTAIGLAVATTIAAIV 233
>SB_54551| Best HMM Match : DUF1515 (HMM E-Value=2.5)
Length = 260
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAIL 373
RLS++++ + + EN K L E V + K G+T AIGL+++ + AI+
Sbjct: 195 RLSEIDELERENRELENQKPLRERVKA----IFKKYGFTVTAIGLAVATTIAAIV 245
>SB_52973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 973
Score = 27.9 bits (59), Expect = 7.6
Identities = 24/89 (26%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAILYN-AN 385
RLS++++ + + EN K L E + + K G+T AIGL+++ + AI+ +
Sbjct: 199 RLSEIDELERENRELENQKPLRERIKA----IFKKYGFTVTAIGLAVATTIAAIVTSLGK 254
Query: 386 SVHAVSTYL-KGEHGIDEEVFLSLPCVLG 469
S+ +V+ + G I +++ LP ++G
Sbjct: 255 SLSSVARGVGNGLKAIGKKLGERLPGLVG 283
>SB_42844| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAIL 373
RLS++++ + + EN K L E + + K G+T+ AIGL+++ + AI+
Sbjct: 196 RLSEIDELGRENRELENRKPLRERIKA----IFKKYGFTATAIGLAVATTIAAIV 246
>SB_39573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 322
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAIL 373
RLS++++ + + EN K L E + + K G+T AIGL+++ + AI+
Sbjct: 195 RLSEIDELERENRELENQKPLRERIKA----IFKKHGFTVTAIGLAVATTIAAIV 245
>SB_38193| Best HMM Match : DUF1279 (HMM E-Value=4.5)
Length = 351
Score = 27.9 bits (59), Expect = 7.6
Identities = 24/89 (26%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAILYN-AN 385
RLS++++ + + EN K L E + + K G+T AIGL+++ + AI+ +
Sbjct: 83 RLSEIDELERDNRELENQKPLRERIKA----IFKKYGFTVTAIGLAVATTIAAIVTSLGK 138
Query: 386 SVHAVST-YLKGEHGIDEEVFLSLPCVLG 469
S+ +V+ + G I +++ LP ++G
Sbjct: 139 SLSSVARGFGNGLKAIGKKLGELLPGLVG 167
>SB_15621| Best HMM Match : DUF1279 (HMM E-Value=1.7)
Length = 323
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAIL 373
RLS++++ + + EN K L E + + K G+T+ AIGL+++ + AI+
Sbjct: 196 RLSEIDELGRENRELENRKPLRERIKA----IFKKYGFTATAIGLAVATTIAAIV 246
>SB_14512| Best HMM Match : IncA (HMM E-Value=0.12)
Length = 642
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAI 370
RLS++++ + + EN K L E + + K G+T AIGL++ +RAI
Sbjct: 171 RLSEIDELERENRELENQKPLRERIKA----IFKEYGFTVTAIGLAVGTTMRAI 220
>SB_10796| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 27.9 bits (59), Expect = 7.6
Identities = 25/94 (26%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAILYN-AN 385
RLS +++ + + EN K L E + + K G+T AIGL+++ + AI+ +
Sbjct: 193 RLSAIDELERKNRELENQKPLRERIKA----IFKKYGFTVTAIGLAVATTIAAIVTSLGR 248
Query: 386 SVHAVSTYL-KGEHGIDEEVFLSLPCVLGHSGVS 484
S+ +V+ + G I +++ LP ++G +S
Sbjct: 249 SLSSVARGVGNGVKAIGKKLGELLPGLVGSIAIS 282
>SB_53864| Best HMM Match : Herpes_US9 (HMM E-Value=2)
Length = 615
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAIL 373
RLS++++ + + EN K L E + + K G+T AIGL+++ + AI+
Sbjct: 154 RLSEIDELERENRELENQKPLRERIKA----IFKKHGFTVTAIGLAVATTIAAIV 204
>SB_50868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 648
Score = 27.9 bits (59), Expect = 7.6
Identities = 24/89 (26%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAILYN-AN 385
RLS++++ + + EN K L E + + K G+T AIGL+++ + AI+ +
Sbjct: 153 RLSEIDELKRENRELENQKPLRERIKA----IFKKYGFTVTAIGLAVATTIAAIVTSLGK 208
Query: 386 SVHAVSTYL-KGEHGIDEEVFLSLPCVLG 469
S+ +V+ + G I +++ LP ++G
Sbjct: 209 SLSSVARGIGNGLKAIGKKLGELLPGLVG 237
>SB_50141| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 328
Score = 27.9 bits (59), Expect = 7.6
Identities = 25/95 (26%), Positives = 45/95 (47%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAILYNANS 388
RLS++++ + + EN K L E + + K G+T AIGL+++ + AI+ +
Sbjct: 105 RLSEIDELERENRELENRKPLRERIKA----IFKKYGFTVHAIGLAVATTIAAIVTSLGK 160
Query: 389 VHAVSTYLKGEHGIDEEVFLSLPCVLGHSGVSDVI 493
++S+ +G CV HS S V+
Sbjct: 161 --SLSSVARGVGCRRSGEIPWRKCVAAHSSRSRVL 193
>SB_48416| Best HMM Match : DUF1279 (HMM E-Value=1.7)
Length = 323
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAIL 373
RLS++++ + + EN K L E + + K G+T+ AIGL+++ + AI+
Sbjct: 196 RLSEIDELGRENRELENRKPLRERIKA----IFKKYGFTATAIGLAVATTIAAIV 246
>SB_37967| Best HMM Match : DUF1279 (HMM E-Value=0.28)
Length = 233
Score = 27.9 bits (59), Expect = 7.6
Identities = 24/89 (26%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAILYN-AN 385
RLS++++ + + EN K L E + + K G+T AIGL+++ + AI+ +
Sbjct: 52 RLSEIDELERENRELENQKPLRERIKA----IFKKYGFTVTAIGLAVATTIAAIVTSLGK 107
Query: 386 SVHAVSTYL-KGEHGIDEEVFLSLPCVLG 469
S+ +V+ + G I +++ LP ++G
Sbjct: 108 SLSSVARRVGNGLKAIGKKLGELLPGLVG 136
>SB_25594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1084
Score = 27.9 bits (59), Expect = 7.6
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAILYN-AN 385
RLS++++ + + N K L E + + K G+T AIGL+++ + AI+ +
Sbjct: 185 RLSEIDELERENRELGNQKPLRERIKA----IFKKYGFTVTAIGLAVATTIAAIVTSLGK 240
Query: 386 SVHAVSTYLKGEH 424
S+ +V+ + G H
Sbjct: 241 SLSSVARGVAGHH 253
>SB_25475| Best HMM Match : DUF1279 (HMM E-Value=0.63)
Length = 239
Score = 27.9 bits (59), Expect = 7.6
Identities = 24/89 (26%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAILYN-AN 385
RLS++++ + + EN K L E + + K G+T AIGL+++ + AI+ +
Sbjct: 112 RLSEIDELERENRELENQKPLRERIKA----IFKKYGFTVTAIGLAVATTIAAIVMSLGK 167
Query: 386 SVHAVSTYL-KGEHGIDEEVFLSLPCVLG 469
S+ +V+ + G I +++ LP ++G
Sbjct: 168 SLSSVARGVGNGLKAIGKKLGELLPGLVG 196
>SB_19210| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 331
Score = 27.9 bits (59), Expect = 7.6
Identities = 24/89 (26%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAILYN-AN 385
RLS++++ + + EN K L E + + K G+T AIGL+++ + AI+ +
Sbjct: 52 RLSEIDELERENRELENQKPLRERIKA----IFKKYGFTVTAIGLAVATTIAAIVTSLGK 107
Query: 386 SVHAVSTYL-KGEHGIDEEVFLSLPCVLG 469
S+ +V+ + G I +++ LP ++G
Sbjct: 108 SLSSVARRVGNGLKAIGKKLGELLPGLVG 136
>SB_3882| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 427
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAIL 373
RLS++++ + + EN K L E + + K G+T AIGL+++ + AI+
Sbjct: 225 RLSEIDELERENRELENQKSLRERIKA----IFKKYGFTVTAIGLAVATTIAAIV 275
>SB_2285| Best HMM Match : IncA (HMM E-Value=3.2)
Length = 293
Score = 27.9 bits (59), Expect = 7.6
Identities = 24/89 (26%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Frame = +2
Query: 209 RLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAILYN-AN 385
RLS++++ + + EN K L E + + K G+T AIGL+++ + AI+ + +
Sbjct: 195 RLSEIDELERENRELENQKPLRERIKA----IFKKYGFTVTAIGLAVATTIAAIVTSLSK 250
Query: 386 SVHAVSTYL-KGEHGIDEEVFLSLPCVLG 469
S+ +V+ + G I +++ LP ++G
Sbjct: 251 SLSSVARGVGNGLKAIGKKLGELLPGLVG 279
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,328,905
Number of Sequences: 59808
Number of extensions: 440979
Number of successful extensions: 1198
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 1097
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1195
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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