Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_F22
(652 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49127-1|CAA88944.1| 333|Caenorhabditis elegans Hypothetical pr... 252 2e-67
U15420-1|AAA67063.1| 333|Caenorhabditis elegans lactate dehydro... 252 2e-67
L43563-1|AAC41613.1| 333|Caenorhabditis elegans L-lactate dehyd... 252 2e-67
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ... 33 0.18
U28733-1|AAA68302.2| 982|Caenorhabditis elegans Patched related... 29 3.8
AF098992-4|AAK73869.2| 250|Caenorhabditis elegans Hypothetical ... 29 3.8
AL132943-6|CAC14393.1| 511|Caenorhabditis elegans Hypothetical ... 28 5.0
Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical pr... 27 8.7
U50311-4|AAA92309.1| 491|Caenorhabditis elegans Serpentine rece... 27 8.7
U50311-3|AAK68203.1| 589|Caenorhabditis elegans Serpentine rece... 27 8.7
AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical ... 27 8.7
AF077546-1|AAC26314.1| 354|Caenorhabditis elegans Hypothetical ... 27 8.7
AC087081-7|AAG37975.1| 303|Caenorhabditis elegans Hypothetical ... 27 8.7
>Z49127-1|CAA88944.1| 333|Caenorhabditis elegans Hypothetical
protein F13D12.2 protein.
Length = 333
Score = 252 bits (616), Expect = 2e-67
Identities = 116/191 (60%), Positives = 154/191 (80%), Gaps = 1/191 (0%)
Frame = +2
Query: 2 DILTYVTWKISGLPKHRVIGSGTNLDSARFRYLLSERLGIATTSCHGYIIGEHGDSSVPV 181
D+LTYVTWK+SGLP+ RV GSGTNLDSARFR+LLSE+L IA +SCHG+IIGEHGDSSV V
Sbjct: 141 DVLTYVTWKLSGLPRERVFGSGTNLDSARFRFLLSEKLNIAPSSCHGWIIGEHGDSSVAV 200
Query: 182 WSGVNIAGVRLSDLNKKIGTDSDPENWK-ELHEMVVKSAYEVIKLKGYTSWAIGLSLSQL 358
WSGVN+AGV L ++ IG +D E+W+ E+H+ VV SAYE+IKLKGYTSWAIGLS++++
Sbjct: 201 WSGVNVAGVTLHEIKPDIGEKTDNEHWEAEIHKKVVDSAYEIIKLKGYTSWAIGLSVAKI 260
Query: 359 VRAILYNANSVHAVSTYLKGEHGIDEEVFLSLPCVLGHSGVSDVIRQPLTETELAQLRKS 538
+ I N+ +V A+ST +KG HGI+++V+LSLP VLG +G++ V++Q LTE E+ +L S
Sbjct: 261 AQGIFSNSRNVFALSTNVKGFHGINDDVYLSLPVVLGSAGLTHVVKQQLTEAEVQKLHNS 320
Query: 539 ATLMAKVQADI 571
A + +VQ I
Sbjct: 321 AKALLEVQNGI 331
>U15420-1|AAA67063.1| 333|Caenorhabditis elegans lactate
dehydrogenase protein.
Length = 333
Score = 252 bits (616), Expect = 2e-67
Identities = 116/191 (60%), Positives = 154/191 (80%), Gaps = 1/191 (0%)
Frame = +2
Query: 2 DILTYVTWKISGLPKHRVIGSGTNLDSARFRYLLSERLGIATTSCHGYIIGEHGDSSVPV 181
D+LTYVTWK+SGLP+ RV GSGTNLDSARFR+LLSE+L IA +SCHG+IIGEHGDSSV V
Sbjct: 141 DVLTYVTWKLSGLPRERVFGSGTNLDSARFRFLLSEKLNIAPSSCHGWIIGEHGDSSVAV 200
Query: 182 WSGVNIAGVRLSDLNKKIGTDSDPENWK-ELHEMVVKSAYEVIKLKGYTSWAIGLSLSQL 358
WSGVN+AGV L ++ IG +D E+W+ E+H+ VV SAYE+IKLKGYTSWAIGLS++++
Sbjct: 201 WSGVNVAGVTLHEIKPDIGEKTDNEHWEAEIHKKVVDSAYEIIKLKGYTSWAIGLSVAKI 260
Query: 359 VRAILYNANSVHAVSTYLKGEHGIDEEVFLSLPCVLGHSGVSDVIRQPLTETELAQLRKS 538
+ I N+ +V A+ST +KG HGI+++V+LSLP VLG +G++ V++Q LTE E+ +L S
Sbjct: 261 AQGIFSNSRNVFALSTNVKGFHGINDDVYLSLPVVLGSAGLTHVVKQQLTEAEVQKLHNS 320
Query: 539 ATLMAKVQADI 571
A + +VQ I
Sbjct: 321 AKALLEVQNGI 331
>L43563-1|AAC41613.1| 333|Caenorhabditis elegans L-lactate
dehydrogenase protein.
Length = 333
Score = 252 bits (616), Expect = 2e-67
Identities = 116/191 (60%), Positives = 154/191 (80%), Gaps = 1/191 (0%)
Frame = +2
Query: 2 DILTYVTWKISGLPKHRVIGSGTNLDSARFRYLLSERLGIATTSCHGYIIGEHGDSSVPV 181
D+LTYVTWK+SGLP+ RV GSGTNLDSARFR+LLSE+L IA +SCHG+IIGEHGDSSV V
Sbjct: 141 DVLTYVTWKLSGLPRERVFGSGTNLDSARFRFLLSEKLNIAPSSCHGWIIGEHGDSSVAV 200
Query: 182 WSGVNIAGVRLSDLNKKIGTDSDPENWK-ELHEMVVKSAYEVIKLKGYTSWAIGLSLSQL 358
WSGVN+AGV L ++ IG +D E+W+ E+H+ VV SAYE+IKLKGYTSWAIGLS++++
Sbjct: 201 WSGVNVAGVTLHEIKPDIGEKTDNEHWEAEIHKKVVDSAYEIIKLKGYTSWAIGLSVAKI 260
Query: 359 VRAILYNANSVHAVSTYLKGEHGIDEEVFLSLPCVLGHSGVSDVIRQPLTETELAQLRKS 538
+ I N+ +V A+ST +KG HGI+++V+LSLP VLG +G++ V++Q LTE E+ +L S
Sbjct: 261 AQGIFSNSRNVFALSTNVKGFHGINDDVYLSLPVVLGSAGLTHVVKQQLTEAEVQKLHNS 320
Query: 539 ATLMAKVQADI 571
A + +VQ I
Sbjct: 321 AKALLEVQNGI 331
>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
protein H43E16.1 protein.
Length = 1203
Score = 33.1 bits (72), Expect = 0.18
Identities = 31/95 (32%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
Frame = -2
Query: 540 ADLRN*ASSV-SVRG*RITSDTPLWPKTQGRDRNTSSSIPCSPLR*VDTA*TLLALYSIA 364
A LR+ +SV S G + TP TQG ++SS+ P S + T +A +IA
Sbjct: 436 ASLRSTQNSVTSTPGSFTVTSTPTITSTQGAMASSSSNSPTSTQAISSSTVTTVASSTIA 495
Query: 363 RTSWDNESPIAHEVYPFSLITS*ALFTTISCNSFQ 259
TS S IA P T + TT + +S Q
Sbjct: 496 PTSSQESSSIASSSAPSQSTTVITVSTTATVSSGQ 530
>U28733-1|AAA68302.2| 982|Caenorhabditis elegans Patched related
family protein 6 protein.
Length = 982
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/26 (38%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
Frame = +1
Query: 88 IPLPALREVGH--RNYFLPWIYYWRT 159
IP+ + +GH R+Y++PW+ W+T
Sbjct: 558 IPVKSRGAMGHFFRDYYVPWLLNWKT 583
>AF098992-4|AAK73869.2| 250|Caenorhabditis elegans Hypothetical
protein F53C3.6a protein.
Length = 250
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -2
Query: 288 FTTISCNSFQFSGSESVPIFLFKSLSRTPAIFTP-DHTGTLLSPCSPIIY 142
F++ S +S S +F S SRT +F+P T ++SP SP+IY
Sbjct: 67 FSSFRGGSSHYSSSFRQNVFHTSSTSRT-FVFSPMTRTIVIISPASPMIY 115
>AL132943-6|CAC14393.1| 511|Caenorhabditis elegans Hypothetical
protein Y116F11B.11 protein.
Length = 511
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +2
Query: 155 EHGDSSVPVWSGVNIAGVRLSDLNKKIGTDSDPENWKELHEMVVKSAYEVIKLKGYTS 328
E+ ++ VP VN +L +LN K +D + + E E ++KSAY + G+ S
Sbjct: 23 EYINNIVPELDIVNNCLKKLLELNGKTLSDVEKQEAMETAETMLKSAYHGLLYAGFKS 80
>Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical
protein F40E10.4 protein.
Length = 1410
Score = 27.5 bits (58), Expect = 8.7
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = +2
Query: 167 SSVPVWSGVNIAGVRLSDLNKKIGTDSDPENWKELHEM--VVKSAYEVIKLKGYTSWAIG 340
SS+P S N+ + DL+K I T+ P+ + LH + +V + LK T +G
Sbjct: 300 SSIPSHSFKNLKNLTRLDLSKNIITEIQPKAFLGLHNLHTLVLYGNNITDLKSDTFEGLG 359
Query: 341 LSLSQLVRAILYNANSVHAV 400
++ +L NAN + +
Sbjct: 360 -----SLQLLLLNANQLTCI 374
>U50311-4|AAA92309.1| 491|Caenorhabditis elegans Serpentine
receptor, class sx protein34, isoform a protein.
Length = 491
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 342 FRCPSWSALYCTMLTVFTLYLLISRVNMELTKK 440
+ P W + T+LTVF + +LI ++ E K
Sbjct: 207 YSAPIWISFILTILTVFVILILIEDISREKKTK 239
>U50311-3|AAK68203.1| 589|Caenorhabditis elegans Serpentine
receptor, class sx protein34, isoform b protein.
Length = 589
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 342 FRCPSWSALYCTMLTVFTLYLLISRVNMELTKK 440
+ P W + T+LTVF + +LI ++ E K
Sbjct: 207 YSAPIWISFILTILTVFVILILIEDISREKKTK 239
>AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical
protein F40E10.4 protein.
Length = 1410
Score = 27.5 bits (58), Expect = 8.7
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = +2
Query: 167 SSVPVWSGVNIAGVRLSDLNKKIGTDSDPENWKELHEM--VVKSAYEVIKLKGYTSWAIG 340
SS+P S N+ + DL+K I T+ P+ + LH + +V + LK T +G
Sbjct: 300 SSIPSHSFKNLKNLTRLDLSKNIITEIQPKAFLGLHNLHTLVLYGNNITDLKSDTFEGLG 359
Query: 341 LSLSQLVRAILYNANSVHAV 400
++ +L NAN + +
Sbjct: 360 -----SLQLLLLNANQLTCI 374
>AF077546-1|AAC26314.1| 354|Caenorhabditis elegans Hypothetical
protein T08E11.6 protein.
Length = 354
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 359 VRAILYNANSVHAVSTYLKGEHGIDEEVFLSLPCV 463
+RA N +H +L G+H D ++F SLP V
Sbjct: 158 MRACYRNLTGLHVTKLHLNGDHLPDIQMFGSLPNV 192
>AC087081-7|AAG37975.1| 303|Caenorhabditis elegans Hypothetical
protein Y82E9BL.10 protein.
Length = 303
Score = 27.5 bits (58), Expect = 8.7
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = -1
Query: 526 LSKFSFSERLTDHI*HTAVAQNTRKGQEHFFVNSMFTLEISRYSVNTVSIVQY-SADQL 353
LSKFSFS + D + +N K ++ FV ++ +IS + +SI+ Y +AD L
Sbjct: 109 LSKFSFSVHIEDKLDIINALKNVLKVKKSIFVKEIWLRDIS--FNDALSILPYFNADML 165
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,803,526
Number of Sequences: 27780
Number of extensions: 316638
Number of successful extensions: 881
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 878
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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