Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_F22
         (652 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    26   0.27 
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    23   2.6  

>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 26.2 bits (55), Expect = 0.27
 Identities = 13/50 (26%), Positives = 22/50 (44%)
 Frame = +2

Query: 260 WKELHEMVVKSAYEVIKLKGYTSWAIGLSLSQLVRAILYNANSVHAVSTY 409
           W E H+ +V+    +    G       L+ +  +  + Y A  +HAV TY
Sbjct: 106 WVERHKHIVRLVTAIGDAYGVALLLHMLTTTITLTLLAYQATKIHAVDTY 155


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +2

Query: 194 NIAGVRLSDLNKKIGTDSDPENWKELHEMVVKSAYE 301
           N+A    +  N+ I  D   + WKE+   VV+ AY+
Sbjct: 19  NLAQQAFAHSNQLI-IDKSLKGWKEVEYEVVRDAYD 53


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,491
Number of Sequences: 438
Number of extensions: 3867
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)