Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_F21
(544 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 110 7e-25
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 110 7e-25
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 109 1e-24
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 109 1e-24
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 109 1e-24
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 107 4e-24
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 51 6e-07
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 51 6e-07
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 51 6e-07
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 51 6e-07
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 51 6e-07
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 51 6e-07
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 51 6e-07
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 51 6e-07
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 51 6e-07
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 49 2e-06
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 49 2e-06
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 48 6e-06
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 47 1e-05
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 45 4e-05
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 44 5e-05
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 44 5e-05
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 44 5e-05
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 42 3e-04
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 42 3e-04
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 41 5e-04
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 40 0.002
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 40 0.002
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 39 0.003
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 38 0.005
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 37 0.011
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 36 0.019
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 36 0.019
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 36 0.025
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 36 0.025
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 36 0.025
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 36 0.025
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 34 0.076
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 34 0.076
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 34 0.076
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 34 0.076
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 33 0.10
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 33 0.10
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 33 0.10
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 33 0.10
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 33 0.10
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 33 0.10
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 33 0.10
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 33 0.13
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 33 0.13
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 33 0.13
AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical ... 33 0.13
AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical ... 33 0.13
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 32 0.23
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 32 0.23
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 32 0.23
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 32 0.23
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 32 0.23
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 32 0.23
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 31 0.41
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 31 0.54
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 31 0.54
Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical pr... 31 0.54
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 31 0.54
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 31 0.54
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 31 0.54
Z46241-3|CAA86317.1| 556|Caenorhabditis elegans Hypothetical pr... 31 0.71
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 31 0.71
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 31 0.71
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 31 0.71
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 30 0.94
Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical pr... 30 0.94
X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein. 30 0.94
U89792-1|AAB94380.1| 339|Caenorhabditis elegans seven-in-absent... 30 0.94
AC024759-5|AAK68432.1| 419|Caenorhabditis elegans Hypothetical ... 30 0.94
Z66497-4|CAA91284.1| 401|Caenorhabditis elegans Hypothetical pr... 30 1.2
AF040661-9|AAG24214.1| 345|Caenorhabditis elegans Hypothetical ... 30 1.2
Z82282-3|CAB05275.1| 638|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical pr... 29 1.6
AL021481-5|CAA16336.2| 455|Caenorhabditis elegans Hypothetical ... 29 1.6
U40940-3|AAN39667.1| 455|Caenorhabditis elegans Nuclear hormone... 29 2.2
U40940-2|AAM69090.1| 434|Caenorhabditis elegans Nuclear hormone... 29 2.2
U40940-1|AAM69089.1| 439|Caenorhabditis elegans Nuclear hormone... 29 2.2
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 29 2.2
AF273782-1|AAG15131.1| 439|Caenorhabditis elegans nuclear recep... 29 2.2
AF016451-13|AAB66007.1| 445|Caenorhabditis elegans Activated in... 29 2.2
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 29 2.2
Z81507-4|CAL49434.1| 598|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z29094-7|CAA82342.2| 453|Caenorhabditis elegans Hypothetical pr... 29 2.9
DQ523832-1|ABF71877.1| 598|Caenorhabditis elegans P21-activated... 29 2.9
AL032639-12|CAL49443.1| 598|Caenorhabditis elegans Hypothetical... 29 2.9
AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical... 29 2.9
AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical... 29 2.9
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 28 3.8
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 28 3.8
Z74029-5|CAA98433.2| 520|Caenorhabditis elegans Hypothetical pr... 28 3.8
Z74029-4|CAA98429.2| 522|Caenorhabditis elegans Hypothetical pr... 28 3.8
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 28 3.8
Z50858-2|CAD44134.1| 467|Caenorhabditis elegans Hypothetical pr... 28 3.8
Z50858-1|CAA90721.1| 453|Caenorhabditis elegans Hypothetical pr... 28 3.8
Z36238-1|CAA85275.2| 400|Caenorhabditis elegans Hypothetical pr... 28 3.8
DQ523831-1|ABF71876.1| 522|Caenorhabditis elegans P21-activated... 28 3.8
AL031627-8|CAA20960.2| 222|Caenorhabditis elegans Hypothetical ... 28 3.8
AL023851-2|CAA19555.2| 209|Caenorhabditis elegans Hypothetical ... 28 3.8
AF408757-1|AAO27836.1| 456|Caenorhabditis elegans nucleobindin ... 28 3.8
AF098994-5|AAC67473.3| 579|Caenorhabditis elegans Hypothetical ... 28 3.8
AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical ... 28 3.8
Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical p... 28 5.0
U80436-7|AAC71109.1| 1638|Caenorhabditis elegans Uncoordinated p... 28 5.0
U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated p... 28 5.0
U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated p... 28 5.0
AF048835-1|AAC12932.1| 1638|Caenorhabditis elegans guanine nucle... 28 5.0
AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucle... 28 5.0
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 28 5.0
Z83232-1|CAB05755.3| 1764|Caenorhabditis elegans Hypothetical pr... 27 6.6
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 27 6.6
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 27 6.6
AB162421-1|BAD36749.1| 1766|Caenorhabditis elegans plexin protein. 27 6.6
Z75545-6|CAA99888.3| 649|Caenorhabditis elegans Hypothetical pr... 27 8.7
U61949-7|AAB03155.1| 510|Caenorhabditis elegans Hypothetical pr... 27 8.7
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 27 8.7
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 27 8.7
AL008986-2|CAA15621.3| 649|Caenorhabditis elegans Hypothetical ... 27 8.7
AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger t... 27 8.7
AF016451-3|AAB66001.1| 388|Caenorhabditis elegans Prion-like-(q... 27 8.7
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 27 8.7
AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical ... 27 8.7
AC006625-10|AAK68271.1| 325|Caenorhabditis elegans Hypothetical... 27 8.7
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 110 bits (264), Expect = 7e-25
Identities = 65/126 (51%), Positives = 75/126 (59%), Gaps = 9/126 (7%)
Frame = +1
Query: 1 FAPFGTITSAKVML-EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKE 177
F+ FGTITSAKVM+ E+GRSKGFGFVCF PEEAT AVT+MN +++G KPLYVALAQRKE
Sbjct: 363 FSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTDMNSKMIGAKPLYVALAQRKE 422
Query: 178 DRKAHLT-------XXXXXXXXXXXXXXXXXIFQPSSAGGYFVPTIPPAQRFYG-PAQMP 333
DR+A L ++QP GYFVP AQ G Q
Sbjct: 423 DRRAQLASQYMQRLATLRMGQQASGVPAMTQLYQPGQQ-GYFVPNPMNAQGRPGFQPQSA 481
Query: 334 QIRPTP 351
QIR P
Sbjct: 482 QIRGPP 487
Score = 53.2 bits (122), Expect = 1e-07
Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Frame = +1
Query: 1 FAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIV-GTK-PLYVALAQR 171
F+ FG ITSA VM + G+ KGFGFV F+ + A +AV ++N I+ GT L V AQ+
Sbjct: 258 FSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEKLNDSILEGTDCKLSVCRAQK 317
Query: 172 KEDRKAHL 195
K +R A L
Sbjct: 318 KSERSAEL 325
Score = 50.8 bits (116), Expect = 6e-07
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +1
Query: 1 FAPFGTITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKE 177
F+ FG I S KV +D G SKG+GFV F + A A+ ++NG ++ K +YV Q +
Sbjct: 165 FSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVGKFQPRA 224
Query: 178 DRKAHL 195
R L
Sbjct: 225 QRMKEL 230
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 110 bits (264), Expect = 7e-25
Identities = 65/126 (51%), Positives = 75/126 (59%), Gaps = 9/126 (7%)
Frame = +1
Query: 1 FAPFGTITSAKVML-EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKE 177
F+ FGTITSAKVM+ E+GRSKGFGFVCF PEEAT AVT+MN +++G KPLYVALAQRKE
Sbjct: 363 FSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTDMNSKMIGAKPLYVALAQRKE 422
Query: 178 DRKAHLT-------XXXXXXXXXXXXXXXXXIFQPSSAGGYFVPTIPPAQRFYG-PAQMP 333
DR+A L ++QP GYFVP AQ G Q
Sbjct: 423 DRRAQLASQYMQRLATLRMGQQASGVPAMTQLYQPGQQ-GYFVPNPMNAQGRPGFQPQSA 481
Query: 334 QIRPTP 351
QIR P
Sbjct: 482 QIRGPP 487
Score = 53.2 bits (122), Expect = 1e-07
Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Frame = +1
Query: 1 FAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIV-GTK-PLYVALAQR 171
F+ FG ITSA VM + G+ KGFGFV F+ + A +AV ++N I+ GT L V AQ+
Sbjct: 258 FSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEKLNDSILEGTDCKLSVCRAQK 317
Query: 172 KEDRKAHL 195
K +R A L
Sbjct: 318 KSERSAEL 325
Score = 50.8 bits (116), Expect = 6e-07
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +1
Query: 1 FAPFGTITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKE 177
F+ FG I S KV +D G SKG+GFV F + A A+ ++NG ++ K +YV Q +
Sbjct: 165 FSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVGKFQPRA 224
Query: 178 DRKAHL 195
R L
Sbjct: 225 QRMKEL 230
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 109 bits (262), Expect = 1e-24
Identities = 64/128 (50%), Positives = 76/128 (59%), Gaps = 6/128 (4%)
Frame = +1
Query: 1 FAPFGTITSAKVML-EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKE 177
F +G ITSAKVM E+GRSKGFGFVCF PEEAT AVTEMN ++V +KPLYVA+AQRKE
Sbjct: 277 FESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIAQRKE 336
Query: 178 DRKAHLTXXXXXXXXXXXXXX---XXXIFQPSSAG-GYFVPTIPPAQR-FYGPAQMPQIR 342
DR+A L ++ P+ G GY+V QR F G QM +R
Sbjct: 337 DRRAQLASQYMQRLASMRMHGNVPGAAMYNPTQPGPGYYVANPMQQQRNFAGGQQM--VR 394
Query: 343 PTPRWTAQ 366
P RW Q
Sbjct: 395 PGGRWGMQ 402
Score = 64.5 bits (150), Expect = 5e-11
Identities = 35/67 (52%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Frame = +1
Query: 1 FAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEM-NGRIVGTK-PLYVALAQRK 174
FA FG ITS +VM +G+SKGFGFV F++PEEA AV + + I GT L+V AQ+K
Sbjct: 173 FAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQKK 232
Query: 175 EDRKAHL 195
+R A L
Sbjct: 233 SERHAEL 239
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 109 bits (262), Expect = 1e-24
Identities = 64/128 (50%), Positives = 76/128 (59%), Gaps = 6/128 (4%)
Frame = +1
Query: 1 FAPFGTITSAKVML-EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKE 177
F +G ITSAKVM E+GRSKGFGFVCF PEEAT AVTEMN ++V +KPLYVA+AQRKE
Sbjct: 274 FESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIAQRKE 333
Query: 178 DRKAHLTXXXXXXXXXXXXXX---XXXIFQPSSAG-GYFVPTIPPAQR-FYGPAQMPQIR 342
DR+A L ++ P+ G GY+V QR F G QM +R
Sbjct: 334 DRRAQLASQYMQRLASMRMHGNVPGAAMYNPTQPGPGYYVANPMQQQRNFAGGQQM--VR 391
Query: 343 PTPRWTAQ 366
P RW Q
Sbjct: 392 PGGRWGMQ 399
Score = 64.5 bits (150), Expect = 5e-11
Identities = 35/67 (52%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Frame = +1
Query: 1 FAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEM-NGRIVGTK-PLYVALAQRK 174
FA FG ITS +VM +G+SKGFGFV F++PEEA AV + + I GT L+V AQ+K
Sbjct: 170 FAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQKK 229
Query: 175 EDRKAHL 195
+R A L
Sbjct: 230 SERHAEL 236
Score = 52.4 bits (120), Expect = 2e-07
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Frame = +1
Query: 1 FAPFGTITSAKVML-EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKE 177
F+ FG I S KV + EDG SKG+GFV F + E A A+ ++NG ++ K ++V Q +
Sbjct: 77 FSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPRA 136
Query: 178 DRKAHL 195
R L
Sbjct: 137 QRNREL 142
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 109 bits (262), Expect = 1e-24
Identities = 64/128 (50%), Positives = 76/128 (59%), Gaps = 6/128 (4%)
Frame = +1
Query: 1 FAPFGTITSAKVML-EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKE 177
F +G ITSAKVM E+GRSKGFGFVCF PEEAT AVTEMN ++V +KPLYVA+AQRKE
Sbjct: 337 FESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIAQRKE 396
Query: 178 DRKAHLTXXXXXXXXXXXXXX---XXXIFQPSSAG-GYFVPTIPPAQR-FYGPAQMPQIR 342
DR+A L ++ P+ G GY+V QR F G QM +R
Sbjct: 397 DRRAQLASQYMQRLASMRMHGNVPGAAMYNPTQPGPGYYVANPMQQQRNFAGGQQM--VR 454
Query: 343 PTPRWTAQ 366
P RW Q
Sbjct: 455 PGGRWGMQ 462
Score = 64.5 bits (150), Expect = 5e-11
Identities = 35/67 (52%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Frame = +1
Query: 1 FAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEM-NGRIVGTK-PLYVALAQRK 174
FA FG ITS +VM +G+SKGFGFV F++PEEA AV + + I GT L+V AQ+K
Sbjct: 233 FAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQKK 292
Query: 175 EDRKAHL 195
+R A L
Sbjct: 293 SERHAEL 299
Score = 52.4 bits (120), Expect = 2e-07
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Frame = +1
Query: 1 FAPFGTITSAKVML-EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKE 177
F+ FG I S KV + EDG SKG+GFV F + E A A+ ++NG ++ K ++V Q +
Sbjct: 140 FSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPRA 199
Query: 178 DRKAHL 195
R L
Sbjct: 200 QRNREL 205
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 107 bits (258), Expect = 4e-24
Identities = 63/128 (49%), Positives = 75/128 (58%), Gaps = 6/128 (4%)
Frame = +1
Query: 1 FAPFGTITSAKVML-EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKE 177
F +G ITSAKVM E+GRSKGFGFVCF PEEAT AVTEMN ++V +KPLYVA+ QRKE
Sbjct: 337 FESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIGQRKE 396
Query: 178 DRKAHLTXXXXXXXXXXXXXX---XXXIFQPSSAG-GYFVPTIPPAQR-FYGPAQMPQIR 342
DR+A L ++ P+ G GY+V QR F G QM +R
Sbjct: 397 DRRAQLASQYMQRVASMRMHGNVPGAAMYNPTQPGPGYYVANPMQQQRNFAGGQQM--VR 454
Query: 343 PTPRWTAQ 366
P RW Q
Sbjct: 455 PGGRWGMQ 462
Score = 64.5 bits (150), Expect = 5e-11
Identities = 35/67 (52%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Frame = +1
Query: 1 FAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEM-NGRIVGTK-PLYVALAQRK 174
FA FG ITS +VM +G+SKGFGFV F++PEEA AV + + I GT L+V AQ+K
Sbjct: 233 FAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQKK 292
Query: 175 EDRKAHL 195
+R A L
Sbjct: 293 SERHAEL 299
Score = 52.4 bits (120), Expect = 2e-07
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Frame = +1
Query: 1 FAPFGTITSAKVML-EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKE 177
F+ FG I S KV + EDG SKG+GFV F + E A A+ ++NG ++ K ++V Q +
Sbjct: 140 FSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPRA 199
Query: 178 DRKAHL 195
R L
Sbjct: 200 QRNREL 205
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 50.8 bits (116), Expect = 6e-07
Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Frame = +1
Query: 1 FAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVAL 162
FAPFG I SAKV ++ SK FGFV + + + AT A++ MNG +G+K L V L
Sbjct: 355 FAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQL 410
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 50.8 bits (116), Expect = 6e-07
Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Frame = +1
Query: 1 FAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVAL 162
FAPFG I SAKV ++ SK FGFV + + + AT A++ MNG +G+K L V L
Sbjct: 519 FAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQL 574
Score = 33.1 bits (72), Expect = 0.13
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Frame = +1
Query: 1 FAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEM--NGRIVG-TKPLYVALAQ 168
FA FG I V+ + DG+S+G FV F++ A A EM + + G + PL V A
Sbjct: 162 FAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFAD 221
Query: 169 RKEDR 183
++D+
Sbjct: 222 TQKDK 226
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 50.8 bits (116), Expect = 6e-07
Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Frame = +1
Query: 1 FAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVAL 162
FAPFG I SAKV ++ SK FGFV + + + AT A++ MNG +G+K L V L
Sbjct: 519 FAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQL 574
Score = 33.1 bits (72), Expect = 0.13
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Frame = +1
Query: 1 FAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEM--NGRIVG-TKPLYVALAQ 168
FA FG I V+ + DG+S+G FV F++ A A EM + + G + PL V A
Sbjct: 162 FAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFAD 221
Query: 169 RKEDR 183
++D+
Sbjct: 222 TQKDK 226
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 50.8 bits (116), Expect = 6e-07
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Frame = +1
Query: 1 FAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 174
F PFG ++ AKV+ + +SKG+GFV + EEA +A+ +MNG+ +G + + A RK
Sbjct: 42 FQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK 101
Score = 35.9 bits (79), Expect = 0.019
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +1
Query: 1 FAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVG 138
FA FG IT ++ + +G+ FV F + + A KA+ +MN + VG
Sbjct: 147 FASFGRITEVRIF----KMQGYAFVKFDNKDAAAKAIVQMNNQDVG 188
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 50.8 bits (116), Expect = 6e-07
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Frame = +1
Query: 1 FAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 174
F PFG ++ AKV+ + +SKG+GFV + EEA +A+ +MNG+ +G + + A RK
Sbjct: 52 FQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK 111
Score = 35.9 bits (79), Expect = 0.019
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +1
Query: 1 FAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVG 138
FA FG IT ++ + +G+ FV F + + A KA+ +MN + VG
Sbjct: 157 FASFGRITEVRIF----KMQGYAFVKFDNKDAAAKAIVQMNNQDVG 198
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 50.8 bits (116), Expect = 6e-07
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Frame = +1
Query: 1 FAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 174
F PFG ++ AKV+ + +SKG+GFV + EEA +A+ +MNG+ +G + + A RK
Sbjct: 155 FQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK 214
Score = 35.9 bits (79), Expect = 0.019
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +1
Query: 1 FAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVG 138
FA FG IT ++ + +G+ FV F + + A KA+ +MN + VG
Sbjct: 260 FASFGRITEVRIF----KMQGYAFVKFDNKDAAAKAIVQMNNQDVG 301
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 50.8 bits (116), Expect = 6e-07
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Frame = +1
Query: 1 FAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 174
F PFG ++ AKV+ + +SKG+GFV + EEA +A+ +MNG+ +G + + A RK
Sbjct: 123 FQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK 182
Score = 35.9 bits (79), Expect = 0.019
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +1
Query: 1 FAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVG 138
FA FG IT ++ + +G+ FV F + + A KA+ +MN + VG
Sbjct: 228 FASFGRITEVRIF----KMQGYAFVKFDNKDAAAKAIVQMNNQDVG 269
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 50.8 bits (116), Expect = 6e-07
Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Frame = +1
Query: 1 FAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVAL 162
FAPFG I SAKV ++ SK FGFV + + + AT A++ MNG +G+K L V L
Sbjct: 448 FAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQL 503
Score = 33.1 bits (72), Expect = 0.13
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Frame = +1
Query: 1 FAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEM--NGRIVG-TKPLYVALAQ 168
FA FG I V+ + DG+S+G FV F++ A A EM + + G + PL V A
Sbjct: 162 FAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFAD 221
Query: 169 RKEDR 183
++D+
Sbjct: 222 TQKDK 226
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 50.8 bits (116), Expect = 6e-07
Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Frame = +1
Query: 1 FAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVAL 162
FAPFG I SAKV ++ SK FGFV + + + AT A++ MNG +G+K L V L
Sbjct: 519 FAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQL 574
Score = 33.1 bits (72), Expect = 0.13
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Frame = +1
Query: 1 FAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEM--NGRIVG-TKPLYVALAQ 168
FA FG I V+ + DG+S+G FV F++ A A EM + + G + PL V A
Sbjct: 162 FAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFAD 221
Query: 169 RKEDR 183
++D+
Sbjct: 222 TQKDK 226
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 48.8 bits (111), Expect = 2e-06
Identities = 29/64 (45%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Frame = +1
Query: 1 FAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ-R 171
FAPFG I SAKV ++ +SK FGFV + + + A+T MNG +G K L V L + R
Sbjct: 449 FAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITAMNGFQIGMKRLKVQLKRPR 508
Query: 172 KEDR 183
E R
Sbjct: 509 NESR 512
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 48.8 bits (111), Expect = 2e-06
Identities = 29/64 (45%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Frame = +1
Query: 1 FAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ-R 171
FAPFG I SAKV ++ +SK FGFV + + + A+T MNG +G K L V L + R
Sbjct: 449 FAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITAMNGFQIGMKRLKVQLKRPR 508
Query: 172 KEDR 183
E R
Sbjct: 509 NESR 512
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 47.6 bits (108), Expect = 6e-06
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Frame = +1
Query: 1 FAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 174
F FG ++ AK++ ++ + KG+GFV + E+A +A+ EMNG +G + + A RK
Sbjct: 152 FVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEMNGAWLGRRTIRTNWATRK 211
Query: 175 ED 180
D
Sbjct: 212 PD 213
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 46.8 bits (106), Expect = 1e-05
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Frame = +1
Query: 1 FAPFGTITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 174
F FG ++ AKV+ ++ +SKG+GFV F + + A A+ MNG+ +G + + A RK
Sbjct: 155 FTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGMNGKWIGKRAVRTNWAARK 214
Query: 175 --EDRKAHLT 198
E+ + LT
Sbjct: 215 NSEENRDKLT 224
Score = 30.3 bits (65), Expect = 0.94
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +1
Query: 1 FAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGR 129
F+ +G I ++ +++ + FV + E ATKA+ EMNG+
Sbjct: 257 FSTYGDIAEVRIF----KTQRYAFVRYEKKECATKAIMEMNGK 295
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 44.8 bits (101), Expect = 4e-05
Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Frame = +1
Query: 1 FAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 174
F + + AKV+ E +SKG+GFV F E+ +A+ EM+G+ VG +P+ + + K
Sbjct: 223 FRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMREMDGKYVGNRPIKLRKSAWK 282
Query: 175 E 177
E
Sbjct: 283 E 283
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 44.4 bits (100), Expect = 5e-05
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 1 FAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA-QRKE 177
F G + +++ + SKGFGFV +P++A +A E NG + + + V LA QR
Sbjct: 2 FEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVH 61
Query: 178 DRKA 189
++KA
Sbjct: 62 NKKA 65
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 44.4 bits (100), Expect = 5e-05
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 1 FAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA-QRKE 177
F G + +++ + SKGFGFV +P++A +A E NG + + + V LA QR
Sbjct: 120 FEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVH 179
Query: 178 DRKA 189
++KA
Sbjct: 180 NKKA 183
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 44.4 bits (100), Expect = 5e-05
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 1 FAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA-QRKE 177
F G + +++ + SKGFGFV +P++A +A E NG + + + V LA QR
Sbjct: 120 FEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVH 179
Query: 178 DRKA 189
++KA
Sbjct: 180 NKKA 183
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 41.9 bits (94), Expect = 3e-04
Identities = 18/62 (29%), Positives = 34/62 (54%)
Frame = +1
Query: 1 FAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKED 180
F FG ++ +++ + SKGFGFV P++A +A E++G ++ + + V A +
Sbjct: 173 FEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQELHGSMIEGRKIEVNCATARVH 232
Query: 181 RK 186
K
Sbjct: 233 SK 234
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 41.9 bits (94), Expect = 3e-04
Identities = 18/62 (29%), Positives = 34/62 (54%)
Frame = +1
Query: 1 FAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKED 180
F FG ++ +++ + SKGFGFV P++A +A E++G ++ + + V A +
Sbjct: 173 FEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQELHGSMIEGRKIEVNCATARVH 232
Query: 181 RK 186
K
Sbjct: 233 SK 234
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 41.1 bits (92), Expect = 5e-04
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +1
Query: 1 FAPFGTITSAKVML--EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQR 171
F+ G I + +++ E GR +GF F+ F+ A +AV +MNG +PL V LA +
Sbjct: 25 FSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQMNGAEFNGRPLRVNLANK 83
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Frame = +1
Query: 1 FAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRI 132
F PFG I +++++ ++ G SKG GFV F +EA A+ +NG I
Sbjct: 148 FRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEADVAIKTLNGSI 193
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = +1
Query: 1 FAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 174
F G I S K++ + G+S G+GFV + E+A +AV+ NG + K + V+ A+
Sbjct: 62 FTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSSFNGLRLQNKTIKVSYARPS 121
Query: 175 EDR 183
D+
Sbjct: 122 NDQ 124
Score = 33.9 bits (74), Expect = 0.076
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +1
Query: 1 FAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 156
F+ FG I + K++ + + KG+ FV S+ EA A+ +NG + K L V
Sbjct: 394 FSQFGAIVNVKILRDLTQQCKGYAFVSMSNYTEAYNAMLSLNGTNLAGKTLQV 446
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Frame = +1
Query: 1 FAPFGTITSA-KVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQR 171
F+ FG I K+M ++ G SKGF F+ F+S E + A+ MNG+ + + + V+ A +
Sbjct: 120 FSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYAFK 179
Query: 172 KEDR 183
++ +
Sbjct: 180 RDSK 183
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Frame = +1
Query: 1 FAPFGTITSA-KVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQR 171
F+ FG I K+M ++ G SKGF F+ F+S E + A+ MNG+ + + + V+ A +
Sbjct: 130 FSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYAFK 189
Query: 172 KEDR 183
++ +
Sbjct: 190 RDSK 193
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 38.7 bits (86), Expect = 0.003
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 1 FAPFGTITSAKVML--EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 168
F PFG + + + + E G+ +GFGFV F E+A A+ MN + K + V A+
Sbjct: 31 FIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNMNESELFGKTIRVNFAR 88
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 37.9 bits (84), Expect = 0.005
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +1
Query: 1 FAPFGTITSAK-VMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA 165
F+ FGT+TS + V +DG+ KG FV F + A K V + ++ + L VAL+
Sbjct: 703 FSKFGTVTSVRRVTHKDGKPKGIAFVDFDTEASAQKCVASGDKLMLRERELEVALS 758
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 37.5 bits (83), Expect = 0.006
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +1
Query: 1 FAPFGTITSAKVML--EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 174
F+ G +++ +++ E GR +GF FV F+ A +AV + NG + L V LAQ +
Sbjct: 24 FSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQFNGVDFNGRALRVNLAQNR 83
Query: 175 ED 180
+
Sbjct: 84 NN 85
>Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical
protein M02G9.3 protein.
Length = 294
Score = 36.7 bits (81), Expect = 0.011
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 6/98 (6%)
Frame = +3
Query: 267 CRRILCSHHTSCTTLLWSSTNAANTTY----TPMDCPTTCKTKHSNTCI--GLRKYATTL 428
C+R CS+ C T S TN N+ T C TC SN C G + +
Sbjct: 112 CQRNSCSN--LCNTGSNSCTNRCNSQCLQICTTPSCTNTCSNSCSNACSNGGNQPIVIVI 169
Query: 429 PSSTKSSNTGCITYFSRSKTNHRTTRCCWHGWINPCTS 542
PSS+++ C S + T + C + + C S
Sbjct: 170 PSSSRNCQNSCQNQCSSACTTMTCRQTCQNTCLGSCNS 207
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 35.9 bits (79), Expect = 0.019
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +1
Query: 10 FGTITSAKVMLEDGRS--KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKED 180
+G I S K +++ + KG+GFV F SP+ A AV +N G + L Q+++D
Sbjct: 130 YGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAVDGLNTE--GVQAQMAKLQQQEQD 186
Score = 28.3 bits (60), Expect = 3.8
Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 10 FGTITSAKVM-LEDGRSKGFGFVCFSSPEEATKAVTEMNG 126
FG + S +++ D +S+G GF S E+ ++ +NG
Sbjct: 211 FGMVISTRILRTPDNQSRGVGFARMDSKEKCEVIISALNG 250
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 35.9 bits (79), Expect = 0.019
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +1
Query: 10 FGTITSAKVMLEDGRS--KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKED 180
+G I S K +++ + KG+GFV F SP+ A AV +N G + L Q+++D
Sbjct: 104 YGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAVDGLNTE--GVQAQMAKLQQQEQD 160
Score = 28.3 bits (60), Expect = 3.8
Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 10 FGTITSAKVM-LEDGRSKGFGFVCFSSPEEATKAVTEMNG 126
FG + S +++ D +S+G GF S E+ ++ +NG
Sbjct: 185 FGMVISTRILRTPDNQSRGVGFARMDSKEKCEVIISALNG 224
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 35.5 bits (78), Expect = 0.025
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +1
Query: 1 FAPFGTITSAKVML--EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQR 171
FA G + + +++ E GR +GF FV FS A +AV ++NG + L V A +
Sbjct: 26 FAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQLNGVAFNGRNLRVNYANK 84
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 35.5 bits (78), Expect = 0.025
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 FAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 156
F PFG I S + + G K F FV + PE A A MNG+++G + L V
Sbjct: 122 FDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESMNGQMLGGRNLKV 175
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 35.5 bits (78), Expect = 0.025
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 FAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 156
F PFG I S + + G K F FV + PE A A MNG+++G + L V
Sbjct: 122 FDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESMNGQMLGGRNLKV 175
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 35.5 bits (78), Expect = 0.025
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 FAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 156
F PFG I S + + G K F FV + PE A A MNG+++G + L V
Sbjct: 122 FDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESMNGQMLGGRNLKV 175
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 33.9 bits (74), Expect = 0.076
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +1
Query: 10 FGTITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDR 183
FG + + + ++ G SKG+ F + P +A+ +NG +G K L V LA + R
Sbjct: 314 FGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLACANQQR 372
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 33.9 bits (74), Expect = 0.076
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +1
Query: 10 FGTITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDR 183
FG + + + ++ G SKG+ F + P +A+ +NG +G K L V LA + R
Sbjct: 314 FGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLACANQQR 372
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 33.9 bits (74), Expect = 0.076
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +1
Query: 10 FGTITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDR 183
FG + + + ++ G SKG+ F + P +A+ +NG +G K L V LA + R
Sbjct: 289 FGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLACANQQR 347
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 33.9 bits (74), Expect = 0.076
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +1
Query: 10 FGTITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDR 183
FG + + + ++ G SKG+ F + P +A+ +NG +G K L V LA + R
Sbjct: 292 FGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLACANQQR 350
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 33.5 bits (73), Expect = 0.10
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +1
Query: 43 EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKE 177
+ G KGF +V F + ++ A++ +NG G + L V AQ+++
Sbjct: 48 DSGSFKGFAYVTFENEQQMNTAISGLNGADFGNRVLKVNRAQQRD 92
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 33.5 bits (73), Expect = 0.10
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 1 FAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 174
F +G + A +M + R +GFGFV F S E A K V E++ + K + AQ K
Sbjct: 154 FETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADK-VCEIHFHEINGKMVECKKAQPK 212
Query: 175 E 177
E
Sbjct: 213 E 213
Score = 31.5 bits (68), Expect = 0.41
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = +1
Query: 1 FAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGTK 144
F FG + VM + R++GFGF+ F P K + + G K
Sbjct: 65 FGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNREHELDGKK 114
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 33.5 bits (73), Expect = 0.10
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +1
Query: 1 FAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKA 108
F +G + S +++ D SKGFGFV S E KA
Sbjct: 71 FFAYGRVLSVEIVTNDRGSKGFGFVTLDSIESCEKA 106
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 33.5 bits (73), Expect = 0.10
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +1
Query: 1 FAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 174
F +G + A+V + +GRS+GF FV F++ E A+ I G K + V A+ +
Sbjct: 49 FTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKG-KSVEVKPAKSR 107
Query: 175 EDRK 186
E++K
Sbjct: 108 ENKK 111
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 33.5 bits (73), Expect = 0.10
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +1
Query: 1 FAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 174
F +G + A+V + +GRS+GF FV F++ E A+ I G K + V A+ +
Sbjct: 49 FTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKG-KSVEVKPAKSR 107
Query: 175 EDRK 186
E++K
Sbjct: 108 ENKK 111
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 33.5 bits (73), Expect = 0.10
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +1
Query: 1 FAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKA 108
F +G + S +++ D SKGFGFV S E KA
Sbjct: 71 FFAYGRVLSVEIVTNDRGSKGFGFVTLDSIESCEKA 106
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 33.5 bits (73), Expect = 0.10
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 1 FAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 174
F +G + A +M + R +GFGFV F S E A K V E++ + K + AQ K
Sbjct: 154 FETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADK-VCEIHFHEINGKMVECKKAQPK 212
Query: 175 E 177
E
Sbjct: 213 E 213
Score = 31.5 bits (68), Expect = 0.41
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = +1
Query: 1 FAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGTK 144
F FG + VM + R++GFGF+ F P K + + G K
Sbjct: 65 FGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNREHELDGKK 114
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 33.1 bits (72), Expect = 0.13
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1
Query: 52 RSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 168
+SKGFGFV F +A A+ +G++V + L V LA+
Sbjct: 58 QSKGFGFVRFYERRDAEHALDRTDGKLVDGRELRVTLAK 96
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 33.1 bits (72), Expect = 0.13
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1
Query: 52 RSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 168
+SKGFGFV F +A A+ +G++V + L V LA+
Sbjct: 58 QSKGFGFVRFYERRDAEHALDRTDGKLVDGRELRVTLAK 96
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 33.1 bits (72), Expect = 0.13
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Frame = +1
Query: 1 FAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEM--NGRIVG-TKPLYVALAQ 168
FA FG I V+ + DG+S+G FV F++ A A EM + + G + PL V A
Sbjct: 162 FAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFAD 221
Query: 169 RKEDR 183
++D+
Sbjct: 222 TQKDK 226
>AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical
protein Y79H2A.3a protein.
Length = 2129
Score = 33.1 bits (72), Expect = 0.13
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = +1
Query: 295 PPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQ 420
PP Q+F P Q Q P+ A P V+P QTPAS+Y Q
Sbjct: 2080 PPVQQFQ-PQQQQQYYQ-PQQQALPQVQPQFQTPASSYGGGQ 2119
>AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical
protein C51G7.3 protein.
Length = 754
Score = 33.1 bits (72), Expect = 0.13
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = +1
Query: 295 PPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQ 420
PP Q+F P Q Q P+ A P V+P QTPAS+Y Q
Sbjct: 705 PPVQQFQ-PQQQQQYYQ-PQQQALPQVQPQFQTPASSYGGGQ 744
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 32.3 bits (70), Expect = 0.23
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +1
Query: 1 FAPFGTITSAKVMLEDGRSK--GFGFVCFSSPEEATKAVTEMNGRIVG 138
F +GT+T ++++L+ K GFGFV F + + V + + + G
Sbjct: 134 FTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNG 181
Score = 31.1 bits (67), Expect = 0.54
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +1
Query: 1 FAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTE 117
++ FG IT VM + RS+GFGFV FS E A+ +
Sbjct: 43 YSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 32.3 bits (70), Expect = 0.23
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +1
Query: 1 FAPFGTITSAKVMLEDGRSK--GFGFVCFSSPEEATKAVTEMNGRIVG 138
F +GT+T ++++L+ K GFGFV F + + V + + + G
Sbjct: 96 FTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNG 143
Score = 31.1 bits (67), Expect = 0.54
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +1
Query: 1 FAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTE 117
++ FG IT VM + RS+GFGFV FS E A+ +
Sbjct: 5 YSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 45
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 32.3 bits (70), Expect = 0.23
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +1
Query: 1 FAPFGTITSAKVMLEDGRSK--GFGFVCFSSPEEATKAVTEMNGRIVG 138
F +GT+T ++++L+ K GFGFV F + + V + + + G
Sbjct: 96 FTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNG 143
Score = 31.1 bits (67), Expect = 0.54
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +1
Query: 1 FAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTE 117
++ FG IT VM + RS+GFGFV FS E A+ +
Sbjct: 5 YSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 45
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 32.3 bits (70), Expect = 0.23
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +1
Query: 1 FAPFGTITSAKVMLEDGRSK--GFGFVCFSSPEEATKAVTEMNGRIVG 138
F +GT+T ++++L+ K GFGFV F + + V + + + G
Sbjct: 134 FTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNG 181
Score = 31.1 bits (67), Expect = 0.54
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +1
Query: 1 FAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTE 117
++ FG IT VM + RS+GFGFV FS E A+ +
Sbjct: 43 YSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 32.3 bits (70), Expect = 0.23
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +1
Query: 1 FAPFGTITSAKVMLEDGRSK--GFGFVCFSSPEEATKAVTEMNGRIVG 138
F +GT+T ++++L+ K GFGFV F + + V + + + G
Sbjct: 134 FTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNG 181
Score = 31.1 bits (67), Expect = 0.54
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +1
Query: 1 FAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTE 117
++ FG IT VM + RS+GFGFV FS E A+ +
Sbjct: 43 YSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 32.3 bits (70), Expect = 0.23
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +1
Query: 1 FAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 168
+ FG IT V + G+GFV F + A K + EM+G+ + K + V+ A+
Sbjct: 113 YQAFGGITDGVVQCHV--ADGYGFVLFDTRANAQKKIVEMDGKTLNGKLISVSWAR 166
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 31.5 bits (68), Expect = 0.41
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 1 FAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMN 123
FA FG I V+ + DG+S+G FV F++ A A EM+
Sbjct: 162 FAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 31.1 bits (67), Expect = 0.54
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +1
Query: 1 FAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKA 108
F FG I ++ + G S+GFGF+ F+ E+AT A
Sbjct: 96 FGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAA 133
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 31.1 bits (67), Expect = 0.54
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +1
Query: 1 FAPFGTITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNG 126
F+ G + S K++ E G+ KG+GF+ F + A A+ +NG
Sbjct: 38 FSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRNLNG 81
>Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical
protein T07F10.3 protein.
Length = 371
Score = 31.1 bits (67), Expect = 0.54
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +1
Query: 46 DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDR 183
DG SKG GFV F + + A+ EM+ VG + + LA + +R
Sbjct: 192 DGSSKGSGFVRFGNQTDQQMALVEMHRTKVGGCRIILKLAGSRGER 237
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 31.1 bits (67), Expect = 0.54
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 49 GRSKGFGFVCFSSPEEATKAVTEMN 123
G KGF FV F S ++A +A+ E+N
Sbjct: 214 GLPKGFAFVTFESRDDAARAIAELN 238
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 31.1 bits (67), Expect = 0.54
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 1 FAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAV 111
F GT+ ++ + DG SKGFGFV SS E K +
Sbjct: 193 FEDIGTVVFCEIKRKSDGNSKGFGFVRMSSVGEQNKVL 230
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 31.1 bits (67), Expect = 0.54
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +1
Query: 1 FAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNG 126
F+ +G + + ++ + G+SKGF F+C+ AV NG
Sbjct: 58 FSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNFNG 101
>Z46241-3|CAA86317.1| 556|Caenorhabditis elegans Hypothetical
protein C38D4.4 protein.
Length = 556
Score = 30.7 bits (66), Expect = 0.71
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 7/61 (11%)
Frame = +1
Query: 253 FQPSSAGGYFVPTIPPAQRFYGPAQMPQIRPT-PRWTA------QPPVRPSTQTPASAYA 411
F S GY P F PA + P P+ T PPVRPST T S++A
Sbjct: 116 FHNKSGFGYAAHLRSPKPSFMYPASSARANPAKPQATGYRNTVRHPPVRPSTATGHSSFA 175
Query: 412 N 414
N
Sbjct: 176 N 176
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 30.7 bits (66), Expect = 0.71
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 1 FAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGR-IVGTKPLYV 156
F FGT+ +++ G+ +G GFV + E A + + +GR IV + + V
Sbjct: 168 FETFGTLDQVEIL---GQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEV 217
Score = 27.1 bits (57), Expect = 8.7
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +1
Query: 1 FAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVG 138
F+ +G + A V+ + S+GFGFV F+S A A+ + ++ G
Sbjct: 69 FSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDRPHKLGG 116
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 30.7 bits (66), Expect = 0.71
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 1 FAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGR-IVGTKPLYV 156
F FGT+ +++ G+ +G GFV + E A + + +GR IV + + V
Sbjct: 188 FETFGTLDQVEIL---GQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEV 237
Score = 27.1 bits (57), Expect = 8.7
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +1
Query: 1 FAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVG 138
F+ +G + A V+ + S+GFGFV F+S A A+ + ++ G
Sbjct: 89 FSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDRPHKLGG 136
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 30.7 bits (66), Expect = 0.71
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 1 FAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGR-IVGTKPLYV 156
F FGT+ +++ G+ +G GFV + E A + + +GR IV + + V
Sbjct: 189 FETFGTLDQVEIL---GQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEV 238
Score = 27.1 bits (57), Expect = 8.7
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +1
Query: 1 FAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVG 138
F+ +G + A V+ + S+GFGFV F+S A A+ + ++ G
Sbjct: 90 FSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDRPHKLGG 137
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 30.3 bits (65), Expect = 0.94
Identities = 24/64 (37%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
Frame = +3
Query: 294 TSCTTLLWSSTNAANTTYTPMDCPT-TCKTKHSNTCIGLRK-----YATTLPSSTKSSNT 455
TS T S A TT TP T T T S T + +K TTLPS+T S+ T
Sbjct: 502 TSTTVPTTPSKTTATTTTTPKPTTTETATTSSSTTTVTTQKPTTVTSTTTLPSTTASTTT 561
Query: 456 GCIT 467
T
Sbjct: 562 KTTT 565
>Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical
protein C29E6.1b protein.
Length = 653
Score = 30.3 bits (65), Expect = 0.94
Identities = 24/64 (37%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
Frame = +3
Query: 294 TSCTTLLWSSTNAANTTYTPMDCPT-TCKTKHSNTCIGLRK-----YATTLPSSTKSSNT 455
TS T S A TT TP T T T S T + +K TTLPS+T S+ T
Sbjct: 343 TSTTVPTTPSKTTATTTTTPKPTTTETATTSSSTTTVTTQKPTTVTSTTTLPSTTASTTT 402
Query: 456 GCIT 467
T
Sbjct: 403 KTTT 406
>X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein.
Length = 693
Score = 30.3 bits (65), Expect = 0.94
Identities = 24/64 (37%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
Frame = +3
Query: 294 TSCTTLLWSSTNAANTTYTPMDCPT-TCKTKHSNTCIGLRK-----YATTLPSSTKSSNT 455
TS T S A TT TP T T T S T + +K TTLPS+T S+ T
Sbjct: 383 TSTTVPTTPSKTTATTTTTPKPTTTETATTSSSTTTVTTQKPTTVTSTTTLPSTTASTTT 442
Query: 456 GCIT 467
T
Sbjct: 443 KTTT 446
>U89792-1|AAB94380.1| 339|Caenorhabditis elegans seven-in-absentia
protein homologue-1 protein.
Length = 339
Score = 30.3 bits (65), Expect = 0.94
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +3
Query: 360 CPTTCKTKHSNTCIGLRKYATTLPSSTKSSNTGC-ITYFSRSKTNHRTTRCCWHGWINPC 536
CPT S +GL K A T+ K S +GC + + KT H C + + PC
Sbjct: 121 CPTCRGPTPSVRNLGLEKIANTVRFPCKFSTSGCPLNFHHADKTEHEEL-CEFRPYCCPC 179
>AC024759-5|AAK68432.1| 419|Caenorhabditis elegans Hypothetical
protein Y37E11AR.2 protein.
Length = 419
Score = 30.3 bits (65), Expect = 0.94
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +3
Query: 360 CPTTCKTKHSNTCIGLRKYATTLPSSTKSSNTGC-ITYFSRSKTNHRTTRCCWHGWINPC 536
CPT S +GL K A T+ K S +GC + + KT H C + + PC
Sbjct: 187 CPTCRGPTPSVRNLGLEKIANTVRFPCKFSTSGCPLNFHHADKTEHEEL-CEFRPYCCPC 245
>Z66497-4|CAA91284.1| 401|Caenorhabditis elegans Hypothetical
protein K08F8.2 protein.
Length = 401
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +1
Query: 283 VPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYAN 414
VP + A Q+ Q++PT T Q PV STQ PAS A+
Sbjct: 143 VPLLQAASHIPSMLQLCQLQPT---TIQSPVYASTQQPASTSAS 183
>AF040661-9|AAG24214.1| 345|Caenorhabditis elegans Hypothetical
protein W10G11.5 protein.
Length = 345
Score = 29.9 bits (64), Expect = 1.2
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = +3
Query: 321 STNAANTTYTPMDCPTTCKTKHSNTCIGLRKYATTLPSSTKSSNTGCITYFSRSKTNHRT 500
+T + TT T PTT + H T + TT+P ST+ T T + T T
Sbjct: 96 TTTSTTTTVTTTPIPTTVTSTHIPTTVTTTSIPTTVP-STQLPTTVTTTPIPTTTTRKTT 154
Query: 501 T 503
T
Sbjct: 155 T 155
>Z82282-3|CAB05275.1| 638|Caenorhabditis elegans Hypothetical
protein T07G12.3 protein.
Length = 638
Score = 29.5 bits (63), Expect = 1.6
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +2
Query: 335 KYDLHPDGLPNHL*DQALKHLHR 403
K+++H + L NHL ++ L H+HR
Sbjct: 511 KFEIHNETLKNHLGEKLLNHVHR 533
>Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical
protein C25A1.4 protein.
Length = 454
Score = 29.5 bits (63), Expect = 1.6
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 1 FAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVAL 162
F G IT ++ +G+SKG + ++ P EA +AV+ +NG+ + + L V +
Sbjct: 208 FGMAGKITWMDFRIDKEGKSKGVCVIQYTHPIEAVQAVSMLNGQRLFDRNLVVKM 262
>AL021481-5|CAA16336.2| 455|Caenorhabditis elegans Hypothetical
protein Y43F4B.7 protein.
Length = 455
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -2
Query: 198 SQMGFA-VFLALS*SNIKRFCSNNTSIHFS 112
SQ+GF V+ N++ F +NNTSIH S
Sbjct: 151 SQLGFCCVYFVFMADNLEDFFNNNTSIHLS 180
>U40940-3|AAN39667.1| 455|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 40, isoform c protein.
Length = 455
Score = 29.1 bits (62), Expect = 2.2
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +3
Query: 375 KTKHSNTCIGLRKYATTLPSSTKSSNTGCITYFSRSKTNHRTTRCCWHG 521
K C+ +A+ + S S N GC T+F R+ N +T C + G
Sbjct: 24 KIPEGTLCVVCSDFASGIHYSVASCN-GCKTFFRRALVNKQTFTCQFSG 71
>U40940-2|AAM69090.1| 434|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 40, isoform b protein.
Length = 434
Score = 29.1 bits (62), Expect = 2.2
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +3
Query: 375 KTKHSNTCIGLRKYATTLPSSTKSSNTGCITYFSRSKTNHRTTRCCWHG 521
K C+ +A+ + S S N GC T+F R+ N +T C + G
Sbjct: 8 KIPEGTLCVVCSDFASGIHYSVASCN-GCKTFFRRALVNKQTFTCQFSG 55
>U40940-1|AAM69089.1| 439|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 40, isoform a protein.
Length = 439
Score = 29.1 bits (62), Expect = 2.2
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +3
Query: 375 KTKHSNTCIGLRKYATTLPSSTKSSNTGCITYFSRSKTNHRTTRCCWHG 521
K C+ +A+ + S S N GC T+F R+ N +T C + G
Sbjct: 8 KIPEGTLCVVCSDFASGIHYSVASCN-GCKTFFRRALVNKQTFTCQFSG 55
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +1
Query: 1 FAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEA 99
F F + K++ DG+SKG+GF+ F + ++A
Sbjct: 86 FEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQA 119
>AF273782-1|AAG15131.1| 439|Caenorhabditis elegans nuclear receptor
NHR-40 protein.
Length = 439
Score = 29.1 bits (62), Expect = 2.2
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +3
Query: 375 KTKHSNTCIGLRKYATTLPSSTKSSNTGCITYFSRSKTNHRTTRCCWHG 521
K C+ +A+ + S S N GC T+F R+ N +T C + G
Sbjct: 8 KIPEGTLCVVCSDFASGIHYSVASCN-GCKTFFRRALVNKQTFTCQFSG 55
>AF016451-13|AAB66007.1| 445|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 8 protein.
Length = 445
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +3
Query: 360 CPTTCKTKHSNTCIGLRKYATTLPSSTKSSNTGCITYFS 476
C T C++ SN+C + T S + S+ C T +S
Sbjct: 396 CQTACQSSCSNSCQAAQPATTACQQSPQQSSCSCQTNYS 434
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +1
Query: 1 FAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEA 99
F F + K++ DG+SKG+GF+ F + ++A
Sbjct: 87 FEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQA 120
>Z81507-4|CAL49434.1| 598|Caenorhabditis elegans Hypothetical
protein Y38F1A.10a protein.
Length = 598
Score = 28.7 bits (61), Expect = 2.9
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +1
Query: 259 PSSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYA 411
PS A + + P + F G + P++ P + QPPV P ASA A
Sbjct: 186 PSPAPVPYSESAPQLKTFTG--ETPKLHPRSPFPPQPPVLPQRSKTASAVA 234
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 61 GFGFVCFSSPEEATKAVTEMNGRIVG 138
GFGFV F +A AV ++NG+ +G
Sbjct: 37 GFGFVEFDDKRDAEDAVHDLNGKELG 62
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 61 GFGFVCFSSPEEATKAVTEMNGRIVG 138
GFGFV F +A AV ++NG+ +G
Sbjct: 37 GFGFVEFDDKRDAEDAVHDLNGKELG 62
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 61 GFGFVCFSSPEEATKAVTEMNGRIVG 138
GFGFV F +A AV ++NG+ +G
Sbjct: 37 GFGFVEFDDKRDAEDAVHDLNGKELG 62
>Z29094-7|CAA82342.2| 453|Caenorhabditis elegans Hypothetical
protein C07A9.8 protein.
Length = 453
Score = 28.7 bits (61), Expect = 2.9
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -2
Query: 156 NIKRFCSNNTSIHFSNRFCGFFRR*KTYESKTFAATILQHDLSRSNS 16
NI R+C + + F + G RR T E+ A +L H+L + NS
Sbjct: 170 NIIRYCVISQCLVFRDIHVGVRRRFPTLEAVAQAGIMLPHELEKFNS 216
>DQ523832-1|ABF71877.1| 598|Caenorhabditis elegans P21-activated
kinase MAX-2 protein.
Length = 598
Score = 28.7 bits (61), Expect = 2.9
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +1
Query: 259 PSSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYA 411
PS A + + P + F G + P++ P + QPPV P ASA A
Sbjct: 186 PSPAPVPYSESAPQLKTFTG--ETPKLHPRSPFPPQPPVLPQRSKTASAVA 234
>AL032639-12|CAL49443.1| 598|Caenorhabditis elegans Hypothetical
protein Y38F1A.10a protein.
Length = 598
Score = 28.7 bits (61), Expect = 2.9
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +1
Query: 259 PSSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYA 411
PS A + + P + F G + P++ P + QPPV P ASA A
Sbjct: 186 PSPAPVPYSESAPQLKTFTG--ETPKLHPRSPFPPQPPVLPQRSKTASAVA 234
>AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical
protein Y43F8B.3b protein.
Length = 1398
Score = 28.7 bits (61), Expect = 2.9
Identities = 19/59 (32%), Positives = 23/59 (38%)
Frame = +3
Query: 336 NTTYTPMDCPTTCKTKHSNTCIGLRKYATTLPSSTKSSNTGCITYFSRSKTNHRTTRCC 512
N T DC TC +N C TL S T SS+T + N +T CC
Sbjct: 733 NNFLTQEDCAATCDV-FTNPCNQPIALPATLCSGTGSSDTCGANMWCHIGANQDSTVCC 790
>AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical
protein Y43F8B.3a protein.
Length = 1816
Score = 28.7 bits (61), Expect = 2.9
Identities = 19/59 (32%), Positives = 23/59 (38%)
Frame = +3
Query: 336 NTTYTPMDCPTTCKTKHSNTCIGLRKYATTLPSSTKSSNTGCITYFSRSKTNHRTTRCC 512
N T DC TC +N C TL S T SS+T + N +T CC
Sbjct: 1151 NNFLTQEDCAATCDV-FTNPCNQPIALPATLCSGTGSSDTCGANMWCHIGANQDSTVCC 1208
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 28.3 bits (60), Expect = 3.8
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = +1
Query: 1 FAPFGTITSAKVMLEDGRS---KGFGFVCFSSPEEATKA 108
F FG + + ++ + G+ +GFGFV F S +EA +A
Sbjct: 768 FETFGAVKTIRIPKKPGQKQQHRGFGFVDFISADEAHRA 806
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 28.3 bits (60), Expect = 3.8
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +1
Query: 43 EDGRSKGFGFVCFSSPEEATKAVTEM-NGRIVGTKPLYVALA-QRKE 177
+ G SKG FV FS+P EA+ + + +G I+ + + LA RKE
Sbjct: 299 DSGHSKGTAFVHFSTPIEASNCIEGVEDGVIIDNRLVKANLAIPRKE 345
>Z74029-5|CAA98433.2| 520|Caenorhabditis elegans Hypothetical
protein C45B11.1b protein.
Length = 520
Score = 28.3 bits (60), Expect = 3.8
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 262 SSAGGYFVPTIPP-AQRFYGPAQMPQIRPTPRWTAQPPV 375
SSA F PT+PP +QR Y P P P P +PP+
Sbjct: 120 SSARHSFRPTLPPVSQRGY-PFNDPSYAPLPLRNQKPPM 157
>Z74029-4|CAA98429.2| 522|Caenorhabditis elegans Hypothetical
protein C45B11.1a protein.
Length = 522
Score = 28.3 bits (60), Expect = 3.8
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 262 SSAGGYFVPTIPP-AQRFYGPAQMPQIRPTPRWTAQPPV 375
SSA F PT+PP +QR Y P P P P +PP+
Sbjct: 122 SSARHSFRPTLPPVSQRGY-PFNDPSYAPLPLRNQKPPM 159
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 28.3 bits (60), Expect = 3.8
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +1
Query: 61 GFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 174
GFGFV F +A AV ++NG+ + + + + +RK
Sbjct: 36 GFGFVDFQDQRDADDAVHDLNGKELCGERVILEFPRRK 73
>Z50858-2|CAD44134.1| 467|Caenorhabditis elegans Hypothetical
protein F44A6.1b protein.
Length = 467
Score = 28.3 bits (60), Expect = 3.8
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 4/38 (10%)
Frame = +1
Query: 295 PPAQRFYGPAQMP----QIRPTPRWTAQPPVRPSTQTP 396
P AQ+ PAQ P P P AQPPV+ Q P
Sbjct: 399 PQAQQQVHPAQQPIQPVNANPPPVQNAQPPVQQQQQPP 436
>Z50858-1|CAA90721.1| 453|Caenorhabditis elegans Hypothetical
protein F44A6.1a protein.
Length = 453
Score = 28.3 bits (60), Expect = 3.8
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 4/38 (10%)
Frame = +1
Query: 295 PPAQRFYGPAQMP----QIRPTPRWTAQPPVRPSTQTP 396
P AQ+ PAQ P P P AQPPV+ Q P
Sbjct: 385 PQAQQQVHPAQQPIQPVNANPPPVQNAQPPVQQQQQPP 422
>Z36238-1|CAA85275.2| 400|Caenorhabditis elegans Hypothetical
protein R74.2 protein.
Length = 400
Score = 28.3 bits (60), Expect = 3.8
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 301 AQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAY 408
A +F P + P + P P Q PV+ +T+ P AY
Sbjct: 101 APKFDIPTRAPLLNPNPIGRNQNPVQTTTKRPVVAY 136
>DQ523831-1|ABF71876.1| 522|Caenorhabditis elegans P21-activated
kinase PAK-2 protein.
Length = 522
Score = 28.3 bits (60), Expect = 3.8
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 262 SSAGGYFVPTIPP-AQRFYGPAQMPQIRPTPRWTAQPPV 375
SSA F PT+PP +QR Y P P P P +PP+
Sbjct: 122 SSARHSFRPTLPPVSQRGY-PFNDPSYAPLPLRNQKPPM 159
>AL031627-8|CAA20960.2| 222|Caenorhabditis elegans Hypothetical
protein Y102A5C.17 protein.
Length = 222
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 294 TSCTTLLWSSTNAANTTYTPMDCPT 368
T+ TT ++T + TT TP+ CPT
Sbjct: 50 TTTTTTTTTTTTTSTTTTTPIPCPT 74
>AL023851-2|CAA19555.2| 209|Caenorhabditis elegans Hypothetical
protein Y68A4B.2 protein.
Length = 209
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 294 TSCTTLLWSSTNAANTTYTPMDCPT 368
T+ TT ++T + TT TP+ CPT
Sbjct: 21 TTSTTTTTTTTTTSTTTTTPIPCPT 45
>AF408757-1|AAO27836.1| 456|Caenorhabditis elegans nucleobindin
protein.
Length = 456
Score = 28.3 bits (60), Expect = 3.8
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 4/38 (10%)
Frame = +1
Query: 295 PPAQRFYGPAQMP----QIRPTPRWTAQPPVRPSTQTP 396
P AQ+ PAQ P P P AQPPV+ Q P
Sbjct: 388 PQAQQQVHPAQQPIQPVNANPPPVQNAQPPVQQQQQPP 425
>AF098994-5|AAC67473.3| 579|Caenorhabditis elegans Hypothetical
protein T06A4.1a protein.
Length = 579
Score = 28.3 bits (60), Expect = 3.8
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +1
Query: 286 PTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPAS 402
P IPP +R Y + P T +P P+T+ P +
Sbjct: 454 PAIPPYRRGYSIIDTTTMEPVDEITQKPTEAPTTEEPTT 492
>AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical
protein T06A4.1b protein.
Length = 606
Score = 28.3 bits (60), Expect = 3.8
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +1
Query: 286 PTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPAS 402
P IPP +R Y + P T +P P+T+ P +
Sbjct: 454 PAIPPYRRGYSIIDTTTMEPVDEITQKPTEAPTTEEPTT 492
>Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical
protein F47B8.13 protein.
Length = 245
Score = 27.9 bits (59), Expect = 5.0
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +1
Query: 268 AGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASA 405
A G PT P A+ PA P+ P P A+P + PS +A
Sbjct: 97 AEGGAAPTAP-AEPVPAPAPEPEAAPAPAPVAEPALAPSPDAAPAA 141
>U80436-7|AAC71109.1| 1638|Caenorhabditis elegans Uncoordinated
protein 73, isoform b protein.
Length = 1638
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 301 AQRFYGPAQMPQIRPTPRWTAQPPVRPS 384
A+ F+ AQ PRWTAQP V P+
Sbjct: 389 AKEFFTSAQR-YFAEVPRWTAQPGVNPN 415
>U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated
protein 73, isoform f protein.
Length = 2140
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 301 AQRFYGPAQMPQIRPTPRWTAQPPVRPS 384
A+ F+ AQ PRWTAQP V P+
Sbjct: 389 AKEFFTSAQR-YFAEVPRWTAQPGVNPN 415
>U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated
protein 73, isoform a protein.
Length = 2488
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 301 AQRFYGPAQMPQIRPTPRWTAQPPVRPS 384
A+ F+ AQ PRWTAQP V P+
Sbjct: 389 AKEFFTSAQR-YFAEVPRWTAQPGVNPN 415
>AF048835-1|AAC12932.1| 1638|Caenorhabditis elegans guanine
nucleotide exchange factorUNC-73B protein.
Length = 1638
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 301 AQRFYGPAQMPQIRPTPRWTAQPPVRPS 384
A+ F+ AQ PRWTAQP V P+
Sbjct: 389 AKEFFTSAQR-YFAEVPRWTAQPGVNPN 415
>AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine
nucleotide exchange factorUNC-73A protein.
Length = 2488
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 301 AQRFYGPAQMPQIRPTPRWTAQPPVRPS 384
A+ F+ AQ PRWTAQP V P+
Sbjct: 389 AKEFFTSAQR-YFAEVPRWTAQPGVNPN 415
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 27.9 bits (59), Expect = 5.0
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +1
Query: 1 FAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGTK 144
F FG I A V+ + +S+G+GFV A +A + N I G K
Sbjct: 55 FEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKDPNPIIDGRK 104
>Z83232-1|CAB05755.3| 1764|Caenorhabditis elegans Hypothetical
protein K04B12.1 protein.
Length = 1764
Score = 27.5 bits (58), Expect = 6.6
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +3
Query: 282 CSHHTSCTTLLWSSTNAANTTYTPMDCPTTCK 377
CSHH+SCT L S + C T+ +
Sbjct: 445 CSHHSSCTECLVSVDPLCQWCHPTQSCTTSAR 476
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 27.5 bits (58), Expect = 6.6
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = +1
Query: 286 PTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPAS 402
P PP R P+ PQ + PP P TP+S
Sbjct: 465 PAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSS 503
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 27.5 bits (58), Expect = 6.6
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = +1
Query: 286 PTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPAS 402
P PP R P+ PQ + PP P TP+S
Sbjct: 472 PAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSS 510
>AB162421-1|BAD36749.1| 1766|Caenorhabditis elegans plexin protein.
Length = 1766
Score = 27.5 bits (58), Expect = 6.6
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +3
Query: 282 CSHHTSCTTLLWSSTNAANTTYTPMDCPTTCK 377
CSHH+SCT L S + C T+ +
Sbjct: 447 CSHHSSCTECLVSVDPLCQWCHPTQSCTTSAR 478
>Z75545-6|CAA99888.3| 649|Caenorhabditis elegans Hypothetical
protein H37N21.1 protein.
Length = 649
Score = 27.1 bits (57), Expect = 8.7
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = -1
Query: 289 WEQSIL--LHYLVGISDPFVAYAYLPCVACTVKSNGLCGLPCV 167
W IL L+YL SDP + + L C ++ NGL + CV
Sbjct: 157 WTTQILSALNYLHS-SDPPIIHGNLTCNTVFIQQNGLIKIGCV 198
>U61949-7|AAB03155.1| 510|Caenorhabditis elegans Hypothetical
protein F49E8.7a protein.
Length = 510
Score = 27.1 bits (57), Expect = 8.7
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -1
Query: 109 PLLWLLQEMKNIRIQNLC-CDHPPT*P 32
PLLW+ ++ + IQN C CD PP P
Sbjct: 175 PLLWMKAGIEKL-IQNNCQCDQPPIVP 200
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 27.1 bits (57), Expect = 8.7
Identities = 17/57 (29%), Positives = 22/57 (38%), Gaps = 7/57 (12%)
Frame = +1
Query: 253 FQPSSAGGYFVPTIPPAQRFYGPAQ------MPQIRPT-PRWTAQPPVRPSTQTPAS 402
+ P+S G+ P P Y P PQ PT P +T P +P T S
Sbjct: 1765 YNPTSPRGFSSPQYSPTSPTYSPTSPSYTPSSPQYSPTSPTYTPSPSEQPGTSAQYS 1821
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 27.1 bits (57), Expect = 8.7
Identities = 17/57 (29%), Positives = 22/57 (38%), Gaps = 7/57 (12%)
Frame = +1
Query: 253 FQPSSAGGYFVPTIPPAQRFYGPAQ------MPQIRPT-PRWTAQPPVRPSTQTPAS 402
+ P+S G+ P P Y P PQ PT P +T P +P T S
Sbjct: 1772 YNPTSPRGFSSPQYSPTSPTYSPTSPSYTPSSPQYSPTSPTYTPSPSEQPGTSAQYS 1828
>AL008986-2|CAA15621.3| 649|Caenorhabditis elegans Hypothetical
protein H37N21.1 protein.
Length = 649
Score = 27.1 bits (57), Expect = 8.7
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = -1
Query: 289 WEQSIL--LHYLVGISDPFVAYAYLPCVACTVKSNGLCGLPCV 167
W IL L+YL SDP + + L C ++ NGL + CV
Sbjct: 157 WTTQILSALNYLHS-SDPPIIHGNLTCNTVFIQQNGLIKIGCV 198
>AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger
transcription factorfamily protein 4 protein.
Length = 367
Score = 27.1 bits (57), Expect = 8.7
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 1 FAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 126
F PFG I + + +GFGFV F+ A ++ +NG
Sbjct: 104 FRPFGKIIAVNYFAQ----QGFGFVQFNEAGSADESCRSLNG 141
>AF016451-3|AAB66001.1| 388|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 5
protein.
Length = 388
Score = 27.1 bits (57), Expect = 8.7
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = +3
Query: 360 CPTTCKTKHSNTCIGLRKYATTLPSSTKSSNTGCITYFS 476
C T C++ SN+C + T S + S+ C +S
Sbjct: 339 CQTACQSSCSNSCQAAQPATTACQQSPQQSSCSCQANYS 377
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 27.1 bits (57), Expect = 8.7
Identities = 21/66 (31%), Positives = 27/66 (40%)
Frame = +3
Query: 294 TSCTTLLWSSTNAANTTYTPMDCPTTCKTKHSNTCIGLRKYATTLPSSTKSSNTGCITYF 473
T+ TT+ + T TP T K + T K T PS+ KSS T T
Sbjct: 391 TTPTTMKSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTMKSTPTTPSTMKSSPTTPTTMK 450
Query: 474 SRSKTN 491
+ S TN
Sbjct: 451 TSSITN 456
>AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical
protein ZK973.9 protein.
Length = 233
Score = 27.1 bits (57), Expect = 8.7
Identities = 18/49 (36%), Positives = 21/49 (42%)
Frame = +1
Query: 253 FQPSSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPA 399
F P GG P + Q + AQM Q + P A PPV P PA
Sbjct: 142 FAPPPMGGGVPPEMMNHQAYQ--AQMRQQQQQPNGQAPPPVYPPFGQPA 188
>AC006625-10|AAK68271.1| 325|Caenorhabditis elegans Hypothetical
protein C55B7.11 protein.
Length = 325
Score = 27.1 bits (57), Expect = 8.7
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -2
Query: 78 TYESKTFAATILQHDLSRSNSSERC 4
+Y+ T+ ++Q+D +R NS RC
Sbjct: 184 SYKKFTYFTALIQYDFARCNSETRC 208
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.132 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,361,539
Number of Sequences: 27780
Number of extensions: 300964
Number of successful extensions: 1399
Number of sequences better than 10.0: 133
Number of HSP's better than 10.0 without gapping: 1215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1379
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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