Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_F19
         (225 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC093703-3|AAL00866.2| 1319|Caenorhabditis elegans Hypothetical ...    29   0.59 
AF125971-2|AAN73291.1|  458|Caenorhabditis elegans Hypothetical ...    28   1.0  
AC006665-2|AAF39904.1|  341|Caenorhabditis elegans Hypothetical ...    27   1.4  
Z70783-9|CAA94857.2|  455|Caenorhabditis elegans Hypothetical pr...    27   1.8  
AF016449-10|AAG24001.2|  353|Caenorhabditis elegans Serpentine r...    25   5.5  
AF025470-3|AAB71057.1|  394|Caenorhabditis elegans Hypothetical ...    25   7.2  
AF016654-8|AAB66025.2|  331|Caenorhabditis elegans Hypothetical ...    25   7.2  
AC006748-6|AAF60516.1|  582|Caenorhabditis elegans Hypothetical ...    25   9.6  
AC006748-5|AAX55685.1|  471|Caenorhabditis elegans Hypothetical ...    25   9.6  

>AC093703-3|AAL00866.2| 1319|Caenorhabditis elegans Hypothetical
            protein Y20F4.4 protein.
          Length = 1319

 Score = 28.7 bits (61), Expect = 0.59
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +1

Query: 52   KVKSPKAQLKSYARRNPTAKNQQRSNS 132
            +V SP AQ  SYARRN   ++  +S S
Sbjct: 1260 RVNSPPAQSTSYARRNDGKRHPSKSRS 1286


>AF125971-2|AAN73291.1|  458|Caenorhabditis elegans Hypothetical
           protein Y4C6B.4a protein.
          Length = 458

 Score = 27.9 bits (59), Expect = 1.0
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 147 AFWHKRITSLLVFCCWV 97
           +F+    T LL+FCCWV
Sbjct: 184 SFYFHSATCLLIFCCWV 200


>AC006665-2|AAF39904.1|  341|Caenorhabditis elegans Hypothetical
           protein H27M09.5 protein.
          Length = 341

 Score = 27.5 bits (58), Expect = 1.4
 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
 Frame = +1

Query: 25  KRRALVSSAK----VKSPKAQLKSYAR--RNPTAKNQQRSNSFVPESSVK 156
           K+ A +S+ K    +K PK   K  A+  RNP     +RSNS  PE   K
Sbjct: 273 KKSAKISTKKLISTIKPPKTLSKKSAKSTRNPLKSPSKRSNSVRPEKKNK 322


>Z70783-9|CAA94857.2|  455|Caenorhabditis elegans Hypothetical
           protein ZK856.9 protein.
          Length = 455

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +1

Query: 43  SSAKVKSPKAQLKSYARRNPTAKNQQRSNSFVP 141
           SS   KSP+  +K+Y R+    KN +   S +P
Sbjct: 45  SSEDEKSPEDVIKAYKRKIENQKNVENEESVIP 77


>AF016449-10|AAG24001.2|  353|Caenorhabditis elegans Serpentine
           receptor, class t protein5 protein.
          Length = 353

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 129 ITSLLVFCCWVSSCVA 82
           IT   +  CWVS+CVA
Sbjct: 111 ITGSFIIGCWVSNCVA 126


>AF025470-3|AAB71057.1|  394|Caenorhabditis elegans Hypothetical
           protein W10D9.3 protein.
          Length = 394

 Score = 25.0 bits (52), Expect = 7.2
 Identities = 12/39 (30%), Positives = 23/39 (58%)
 Frame = +2

Query: 62  PQKRS*KATHEETQQQKTSKEVILLCQKAVLNDWDKLKN 178
           PQK   +   E+ Q+ +T+ + IL   + +L ++D +KN
Sbjct: 352 PQKSLLELVKEDQQRVQTNLDRILAEAEILLQEYDHMKN 390


>AF016654-8|AAB66025.2|  331|Caenorhabditis elegans Hypothetical
           protein C17A2.1 protein.
          Length = 331

 Score = 25.0 bits (52), Expect = 7.2
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +1

Query: 52  KVKSPKAQLKSYARRNPTAKNQQRSNSFVPESSVK 156
           K+K+PK Q+     +N T  N +   +F  E+S K
Sbjct: 79  KIKAPKQQVIQEVDQNKTFPNSEMLPNFTRENSHK 113


>AC006748-6|AAF60516.1|  582|Caenorhabditis elegans Hypothetical
           protein Y39A3B.5a protein.
          Length = 582

 Score = 24.6 bits (51), Expect = 9.6
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -1

Query: 162 QSFNTAFWHKRITSLLVFCCWVSSC 88
           QS N + W+  I + +    ++SSC
Sbjct: 439 QSLNLSVWNSDINTFITLLTYISSC 463


>AC006748-5|AAX55685.1|  471|Caenorhabditis elegans Hypothetical
           protein Y39A3B.5c protein.
          Length = 471

 Score = 24.6 bits (51), Expect = 9.6
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -1

Query: 162 QSFNTAFWHKRITSLLVFCCWVSSC 88
           QS N + W+  I + +    ++SSC
Sbjct: 328 QSLNLSVWNSDINTFITLLTYISSC 352


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,757,877
Number of Sequences: 27780
Number of extensions: 51740
Number of successful extensions: 179
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 179
length of database: 12,740,198
effective HSP length: 54
effective length of database: 11,240,078
effective search space used: 224801560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)