Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_F14
         (606 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   3.5  
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    22   4.6  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   6.1  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   8.1  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 5/13 (38%), Positives = 12/13 (92%)
 Frame = +1

Query: 448 LLFSFHILYFCLL 486
           ++F+ H+L++C+L
Sbjct: 220 IIFTIHLLFYCVL 232


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 10/44 (22%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = +3

Query: 336 YTHPQFP*IRISILLE--AYHRF*FVNSVTRTYGFIRKLIVVFI 461
           Y HP  P      + +  ++H+    N+++  +GF+++  V F+
Sbjct: 55  YIHPDSPSTGEQWMQKVVSFHKLKLTNNISDKHGFLKEKAVDFL 98


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = -3

Query: 556 RVQLYHRNNPHGCRFQPLQRIRRTINKST 470
           RVQ++ +N    CR Q  Q+  ++ +++T
Sbjct: 170 RVQVWFKNRRAKCRQQLQQQQNKSASRTT 198


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 402 TKIGDMPPIKLISE 361
           +K+G  PPIK I++
Sbjct: 36  SKVGPAPPIKFINK 49


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,266
Number of Sequences: 336
Number of extensions: 3179
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)