Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_F12
         (449 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             23   3.8  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   3.8  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    23   3.8  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   6.6  

>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 23.4 bits (48), Expect = 3.8
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +2

Query: 275 EKRSLSRNYYTSFPIHLPPFYPRPII 352
           E+R + +  +T++P H  P +P P +
Sbjct: 826 ERREIKQLQFTAWPDHGVPDHPAPFL 851


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 3.8
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = +2

Query: 281 RSLSRNYYTSFPIHLPPFYPRPIILPRDPERFPIYASS 394
           RSLS     S  +  P   PRP  +P  PE     +SS
Sbjct: 94  RSLSNLELPSCRLPCPNLIPRPAEVPTTPEHKSAASSS 131


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 23.4 bits (48), Expect = 3.8
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +1

Query: 7   CNRITDCVNDALGREFLSALHTTNIQTS 90
           C RI D V   L +   SA H+T+ + +
Sbjct: 813 CRRILDRVQRLLAQGITSAFHSTSCEVA 840


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
            transcriptase protein.
          Length = 1049

 Score = 22.6 bits (46), Expect = 6.6
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -3

Query: 231  SFISSMIEGSIGWSPLVGAGEMSLP 157
            SFI+ ++ GSI  SPL+   ++  P
Sbjct: 966  SFIAGLLNGSIDSSPLLHRVDIYAP 990


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 440,337
Number of Sequences: 2352
Number of extensions: 8736
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38268990
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)