Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_F06
(492 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81120-2|CAB03344.2| 426|Caenorhabditis elegans Hypothetical pr... 31 0.60
U41264-7|AAA82427.2| 819|Caenorhabditis elegans Hypothetical pr... 30 0.79
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 28 3.2
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 28 3.2
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 28 3.2
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 28 3.2
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 28 3.2
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 28 3.2
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. 28 3.2
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z81484-11|CAB03969.2| 365|Caenorhabditis elegans Hypothetical p... 27 9.8
AY273823-1|AAQ01772.1| 1040|Caenorhabditis elegans VAB-19 protein. 27 9.8
AC006688-1|AAF39969.3| 1040|Caenorhabditis elegans Variable abno... 27 9.8
>Z81120-2|CAB03344.2| 426|Caenorhabditis elegans Hypothetical
protein T12D8.4 protein.
Length = 426
Score = 30.7 bits (66), Expect = 0.60
Identities = 18/75 (24%), Positives = 35/75 (46%)
Frame = -2
Query: 491 VQTVPAPYTITTAVSSVKAGHSIDVVISGKTPEDKMAGILLEARQGDKIVGTWTVSPDDT 312
+ VP YT+ ++ S G + + K ++ + +R+ +VG ++ D
Sbjct: 100 IHQVPFSYTLPKSLPSSFEGEFGHIRYTCKAICERPWDFDIVSRKAFTVVGIEDINSDPK 159
Query: 311 FSQPLNCGEPNNAVT 267
++P C E N+AVT
Sbjct: 160 LNEPATCVESNHAVT 174
>U41264-7|AAA82427.2| 819|Caenorhabditis elegans Hypothetical
protein F10E7.4 protein.
Length = 819
Score = 30.3 bits (65), Expect = 0.79
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = -2
Query: 257 HAKELDRQTVSYPWTAPKDLEGDVVFKVTIVKSYAVFWVGIESAPVKV 114
HA + +V W AP+ G VVF+ +++++ +++ E VK+
Sbjct: 125 HANLKSKTSVHMMWKAPEVSSGCVVFRASVIETKYIWFTEAEGLTVKL 172
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 28.3 bits (60), Expect = 3.2
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = -2
Query: 470 YTITTAVSSVKAGHSIDVVISGKTPEDKMAGILLEARQGDKIVGTWTVSPDD 315
YT+T +S HS++V++ GK P + + + D+ W V DD
Sbjct: 1928 YTLTATNASGSDKHSVEVIVLGK-PSSPLGPLEVSNVYEDRADLEWKVPEDD 1978
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 28.3 bits (60), Expect = 3.2
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = -2
Query: 470 YTITTAVSSVKAGHSIDVVISGKTPEDKMAGILLEARQGDKIVGTWTVSPDD 315
YT+T +S HS++V++ GK P + + + D+ W V DD
Sbjct: 2457 YTLTATNASGSDKHSVEVIVLGK-PSSPLGPLEVSNVYEDRADLEWKVPEDD 2507
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 28.3 bits (60), Expect = 3.2
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = -2
Query: 470 YTITTAVSSVKAGHSIDVVISGKTPEDKMAGILLEARQGDKIVGTWTVSPDD 315
YT+T +S HS++V++ GK P + + + D+ W V DD
Sbjct: 2138 YTLTATNASGSDKHSVEVIVLGK-PSSPLGPLEVSNVYEDRADLEWKVPEDD 2188
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
ZK617.1c protein.
Length = 6629
Score = 28.3 bits (60), Expect = 3.2
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = -2
Query: 470 YTITTAVSSVKAGHSIDVVISGKTPEDKMAGILLEARQGDKIVGTWTVSPDD 315
YT+T +S HS++V++ GK P + + + D+ W V DD
Sbjct: 1928 YTLTATNASGSDKHSVEVIVLGK-PSSPLGPLEVSNVYEDRADLEWKVPEDD 1978
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
ZK617.1b protein.
Length = 7158
Score = 28.3 bits (60), Expect = 3.2
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = -2
Query: 470 YTITTAVSSVKAGHSIDVVISGKTPEDKMAGILLEARQGDKIVGTWTVSPDD 315
YT+T +S HS++V++ GK P + + + D+ W V DD
Sbjct: 2457 YTLTATNASGSDKHSVEVIVLGK-PSSPLGPLEVSNVYEDRADLEWKVPEDD 2507
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
ZK617.1a protein.
Length = 6839
Score = 28.3 bits (60), Expect = 3.2
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = -2
Query: 470 YTITTAVSSVKAGHSIDVVISGKTPEDKMAGILLEARQGDKIVGTWTVSPDD 315
YT+T +S HS++V++ GK P + + + D+ W V DD
Sbjct: 2138 YTLTATNASGSDKHSVEVIVLGK-PSSPLGPLEVSNVYEDRADLEWKVPEDD 2188
>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
Length = 6048
Score = 28.3 bits (60), Expect = 3.2
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = -2
Query: 470 YTITTAVSSVKAGHSIDVVISGKTPEDKMAGILLEARQGDKIVGTWTVSPDD 315
YT+T +S HS++V++ GK P + + + D+ W V DD
Sbjct: 1347 YTLTATNASGSDKHSVEVIVLGK-PSSPLGPLEVSNVYEDRADLEWKVPEDD 1397
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 26.6 bits (56), Expect = 9.8
Identities = 23/91 (25%), Positives = 41/91 (45%)
Frame = -3
Query: 394 KTKWPASSWKLVRVTRSSALGP*APMIPSRNPSTVVNQITP*PTRCMPKN*TDRLFLTPG 215
++K P + + ++S + P PS++P + +P + K+ + R +P
Sbjct: 430 RSKSPPAPRRRRSPSQSKSPAPRRRRSPSKSPQAPRRRRSPSGS----KSRSPRRRRSPA 485
Query: 214 QLLRT*KATLCSRSPLSRATPSSGSESNQPP 122
R ++ RSP R +PSS S S PP
Sbjct: 486 AAPRRRQSPQRRRSPRRRRSPSSSSRSRSPP 516
>Z81484-11|CAB03969.2| 365|Caenorhabditis elegans Hypothetical
protein C47A10.4 protein.
Length = 365
Score = 26.6 bits (56), Expect = 9.8
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = -2
Query: 239 RQTVSYPWTAPKDLEGDVVFKV 174
R+ +P+T PK+ EGD+ F++
Sbjct: 330 RRKSIFPFTKPKETEGDIYFEM 351
>AY273823-1|AAQ01772.1| 1040|Caenorhabditis elegans VAB-19 protein.
Length = 1040
Score = 26.6 bits (56), Expect = 9.8
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -3
Query: 184 CSRSPLSRATPSSGSESNQ 128
C SP S +PSSGS+ NQ
Sbjct: 34 CDVSPNSMTSPSSGSDQNQ 52
>AC006688-1|AAF39969.3| 1040|Caenorhabditis elegans Variable
abnormal morphology protein19 protein.
Length = 1040
Score = 26.6 bits (56), Expect = 9.8
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -3
Query: 184 CSRSPLSRATPSSGSESNQ 128
C SP S +PSSGS+ NQ
Sbjct: 34 CDVSPNSMTSPSSGSDQNQ 52
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,669,801
Number of Sequences: 27780
Number of extensions: 258831
Number of successful extensions: 662
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 662
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 924715866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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