Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_F04
(508 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X02317-1|CAA26182.1| 154|Homo sapiens protein ( Human mRNA for ... 146 4e-35
L44139-1|AAB05661.1| 154|Homo sapiens Cu/Zn-superoxide dismutas... 146 4e-35
EF151142-1|ABL96616.1| 154|Homo sapiens superoxide dismutase 1 ... 146 4e-35
CR541742-1|CAG46542.1| 154|Homo sapiens SOD1 protein. 146 4e-35
CR450355-1|CAG29351.1| 154|Homo sapiens SOD1 protein. 146 4e-35
BT006676-1|AAP35322.1| 154|Homo sapiens superoxide dismutase 1,... 146 4e-35
BC001034-1|AAH01034.1| 154|Homo sapiens superoxide dismutase 1,... 146 4e-35
AY835629-1|AAV80422.1| 154|Homo sapiens superoxide dismutase 1,... 146 4e-35
AY450286-1|AAR21563.1| 154|Homo sapiens superoxide dismutase pr... 146 4e-35
AY049787-1|AAL15444.1| 154|Homo sapiens soluble superoxide dism... 146 4e-35
L44139-2|AAB05662.1| 154|Homo sapiens Cu/Zn-superoxide dismutas... 143 3e-34
CR541928-1|CAG46726.1| 274|Homo sapiens CCS protein. 122 5e-28
BC112055-1|AAI12056.1| 274|Homo sapiens copper chaperone for su... 122 5e-28
BC105016-1|AAI05017.1| 274|Homo sapiens copper chaperone for su... 122 5e-28
AF002210-1|AAC51764.1| 274|Homo sapiens copper chaperone for su... 122 5e-28
AY113179-1|AAM50090.1| 274|Homo sapiens superoxide dismutase co... 121 1e-27
U10116-1|AAA62278.1| 240|Homo sapiens superoxide dismutase prot... 74 3e-13
J02947-1|AAA66000.1| 240|Homo sapiens SOD3 protein. 74 3e-13
CR541853-1|CAG46651.1| 240|Homo sapiens SOD3 protein. 74 3e-13
BC014418-1|AAH14418.1| 240|Homo sapiens superoxide dismutase 3,... 74 3e-13
AY787834-1|AAV40827.1| 240|Homo sapiens superoxide dismutase 3,... 74 3e-13
X95228-1|CAA64520.1| 35|Homo sapiens Cu /Zn superoxide dismuta... 42 0.002
X01784-1|CAA25919.1| 35|Homo sapiens protein ( Human superoxid... 42 0.002
L46375-1|AAB59627.1| 35|Homo sapiens superoxide dismutase prot... 39 0.012
X01783-1|CAA25918.1| 39|Homo sapiens protein ( Human superoxid... 38 0.020
X01781-1|CAA25916.1| 32|Homo sapiens protein ( Human superoxid... 37 0.046
L46374-1|AAB59626.1| 32|Homo sapiens superoxide dismutase prot... 33 0.43
X82209-1|CAA57693.2| 1319|Homo sapiens MN1 protein protein. 31 3.1
EF540994-1|ABQ01232.1| 1322|Homo sapiens meningioma (disrupted i... 31 3.1
AL390210-1|CAI17971.2| 1320|Homo sapiens meningioma (disrupted i... 31 3.1
AL031591-1|CAI20309.2| 1320|Homo sapiens meningioma (disrupted i... 31 3.1
DQ422807-1|ABD72606.1| 1427|Homo sapiens ADAM metallopeptidase w... 29 7.1
AY358118-1|AAQ88485.1| 1097|Homo sapiens ADAMTS13 protein. 29 7.1
AY055376-1|AAL17652.1| 1427|Homo sapiens von Willebrand factor-c... 29 7.1
AL593848-11|CAI17258.1| 1371|Homo sapiens ADAM metallopeptidase ... 29 7.1
AL593848-10|CAI17256.1| 1427|Homo sapiens ADAM metallopeptidase ... 29 7.1
AL593848-9|CAI17257.1| 1340|Homo sapiens ADAM metallopeptidase w... 29 7.1
AL158826-24|CAI12851.1| 1371|Homo sapiens ADAM metallopeptidase ... 29 7.1
AL158826-23|CAI12850.1| 1427|Homo sapiens ADAM metallopeptidase ... 29 7.1
AL158826-22|CAI12852.1| 1340|Homo sapiens ADAM metallopeptidase ... 29 7.1
AJ420810-1|CAD12729.1| 1371|Homo sapiens ADAMTS-13 protein, vari... 29 7.1
AJ305314-1|CAC83682.1| 1340|Homo sapiens ADAMTS-13 protein protein. 29 7.1
AF414401-1|AAL11095.1| 1427|Homo sapiens ADAMTS13 protein. 29 7.1
AB069698-1|BAB69487.2| 1427|Homo sapiens von Willebrand factor-c... 29 7.1
X74874-1|CAA52862.1| 1970|Homo sapiens RNA polymerase II largest... 29 9.3
X63564-1|CAA45125.1| 1970|Homo sapiens RNA polymerase II largest... 29 9.3
>X02317-1|CAA26182.1| 154|Homo sapiens protein ( Human mRNA for
Cu/Zn superoxide dismutase (SOD). ).
Length = 154
Score = 146 bits (354), Expect = 4e-35
Identities = 70/145 (48%), Positives = 98/145 (67%), Gaps = 2/145 (1%)
Frame = +2
Query: 80 TRAIAHLVGEN-IRGNITFTRLP-DGKVHVEGSIVGLPPGHYGFHVHEKGDISGGCGSTG 253
T+A+ L G+ ++G I F + +G V V GSI GL G +GFHVHE GD + GC S G
Sbjct: 3 TKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAG 62
Query: 254 SHFNPENKEHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHE 433
HFNP +++HG P DE RHVGDLGN DK+ + + + D ++++G H I+GR +V+HE
Sbjct: 63 PHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHE 122
Query: 434 RADDFGRTDHPDSRKTGNAGGRVAC 508
+ADD G+ + +S KTGNAG R+AC
Sbjct: 123 KADDLGKGGNEESTKTGNAGSRLAC 147
>L44139-1|AAB05661.1| 154|Homo sapiens Cu/Zn-superoxide dismutase
protein.
Length = 154
Score = 146 bits (354), Expect = 4e-35
Identities = 70/145 (48%), Positives = 98/145 (67%), Gaps = 2/145 (1%)
Frame = +2
Query: 80 TRAIAHLVGEN-IRGNITFTRLP-DGKVHVEGSIVGLPPGHYGFHVHEKGDISGGCGSTG 253
T+A+ L G+ ++G I F + +G V V GSI GL G +GFHVHE GD + GC S G
Sbjct: 3 TKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAG 62
Query: 254 SHFNPENKEHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHE 433
HFNP +++HG P DE RHVGDLGN DK+ + + + D ++++G H I+GR +V+HE
Sbjct: 63 PHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHE 122
Query: 434 RADDFGRTDHPDSRKTGNAGGRVAC 508
+ADD G+ + +S KTGNAG R+AC
Sbjct: 123 KADDLGKGGNEESTKTGNAGSRLAC 147
>EF151142-1|ABL96616.1| 154|Homo sapiens superoxide dismutase 1
protein.
Length = 154
Score = 146 bits (354), Expect = 4e-35
Identities = 70/145 (48%), Positives = 98/145 (67%), Gaps = 2/145 (1%)
Frame = +2
Query: 80 TRAIAHLVGEN-IRGNITFTRLP-DGKVHVEGSIVGLPPGHYGFHVHEKGDISGGCGSTG 253
T+A+ L G+ ++G I F + +G V V GSI GL G +GFHVHE GD + GC S G
Sbjct: 3 TKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAG 62
Query: 254 SHFNPENKEHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHE 433
HFNP +++HG P DE RHVGDLGN DK+ + + + D ++++G H I+GR +V+HE
Sbjct: 63 PHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHE 122
Query: 434 RADDFGRTDHPDSRKTGNAGGRVAC 508
+ADD G+ + +S KTGNAG R+AC
Sbjct: 123 KADDLGKGGNEESTKTGNAGSRLAC 147
>CR541742-1|CAG46542.1| 154|Homo sapiens SOD1 protein.
Length = 154
Score = 146 bits (354), Expect = 4e-35
Identities = 70/145 (48%), Positives = 98/145 (67%), Gaps = 2/145 (1%)
Frame = +2
Query: 80 TRAIAHLVGEN-IRGNITFTRLP-DGKVHVEGSIVGLPPGHYGFHVHEKGDISGGCGSTG 253
T+A+ L G+ ++G I F + +G V V GSI GL G +GFHVHE GD + GC S G
Sbjct: 3 TKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAG 62
Query: 254 SHFNPENKEHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHE 433
HFNP +++HG P DE RHVGDLGN DK+ + + + D ++++G H I+GR +V+HE
Sbjct: 63 PHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHE 122
Query: 434 RADDFGRTDHPDSRKTGNAGGRVAC 508
+ADD G+ + +S KTGNAG R+AC
Sbjct: 123 KADDLGKGGNEESTKTGNAGSRLAC 147
>CR450355-1|CAG29351.1| 154|Homo sapiens SOD1 protein.
Length = 154
Score = 146 bits (354), Expect = 4e-35
Identities = 70/145 (48%), Positives = 98/145 (67%), Gaps = 2/145 (1%)
Frame = +2
Query: 80 TRAIAHLVGEN-IRGNITFTRLP-DGKVHVEGSIVGLPPGHYGFHVHEKGDISGGCGSTG 253
T+A+ L G+ ++G I F + +G V V GSI GL G +GFHVHE GD + GC S G
Sbjct: 3 TKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAG 62
Query: 254 SHFNPENKEHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHE 433
HFNP +++HG P DE RHVGDLGN DK+ + + + D ++++G H I+GR +V+HE
Sbjct: 63 PHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHE 122
Query: 434 RADDFGRTDHPDSRKTGNAGGRVAC 508
+ADD G+ + +S KTGNAG R+AC
Sbjct: 123 KADDLGKGGNEESTKTGNAGSRLAC 147
>BT006676-1|AAP35322.1| 154|Homo sapiens superoxide dismutase 1,
soluble (amyotrophic lateral sclerosis 1 (adult))
protein.
Length = 154
Score = 146 bits (354), Expect = 4e-35
Identities = 70/145 (48%), Positives = 98/145 (67%), Gaps = 2/145 (1%)
Frame = +2
Query: 80 TRAIAHLVGEN-IRGNITFTRLP-DGKVHVEGSIVGLPPGHYGFHVHEKGDISGGCGSTG 253
T+A+ L G+ ++G I F + +G V V GSI GL G +GFHVHE GD + GC S G
Sbjct: 3 TKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAG 62
Query: 254 SHFNPENKEHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHE 433
HFNP +++HG P DE RHVGDLGN DK+ + + + D ++++G H I+GR +V+HE
Sbjct: 63 PHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHE 122
Query: 434 RADDFGRTDHPDSRKTGNAGGRVAC 508
+ADD G+ + +S KTGNAG R+AC
Sbjct: 123 KADDLGKGGNEESTKTGNAGSRLAC 147
>BC001034-1|AAH01034.1| 154|Homo sapiens superoxide dismutase 1,
soluble (amyotrophic lateral sclerosis 1 (adult))
protein.
Length = 154
Score = 146 bits (354), Expect = 4e-35
Identities = 70/145 (48%), Positives = 98/145 (67%), Gaps = 2/145 (1%)
Frame = +2
Query: 80 TRAIAHLVGEN-IRGNITFTRLP-DGKVHVEGSIVGLPPGHYGFHVHEKGDISGGCGSTG 253
T+A+ L G+ ++G I F + +G V V GSI GL G +GFHVHE GD + GC S G
Sbjct: 3 TKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAG 62
Query: 254 SHFNPENKEHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHE 433
HFNP +++HG P DE RHVGDLGN DK+ + + + D ++++G H I+GR +V+HE
Sbjct: 63 PHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHE 122
Query: 434 RADDFGRTDHPDSRKTGNAGGRVAC 508
+ADD G+ + +S KTGNAG R+AC
Sbjct: 123 KADDLGKGGNEESTKTGNAGSRLAC 147
>AY835629-1|AAV80422.1| 154|Homo sapiens superoxide dismutase 1,
soluble (amyotrophic lateral sclerosis 1 (adult))
protein.
Length = 154
Score = 146 bits (354), Expect = 4e-35
Identities = 70/145 (48%), Positives = 98/145 (67%), Gaps = 2/145 (1%)
Frame = +2
Query: 80 TRAIAHLVGEN-IRGNITFTRLP-DGKVHVEGSIVGLPPGHYGFHVHEKGDISGGCGSTG 253
T+A+ L G+ ++G I F + +G V V GSI GL G +GFHVHE GD + GC S G
Sbjct: 3 TKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAG 62
Query: 254 SHFNPENKEHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHE 433
HFNP +++HG P DE RHVGDLGN DK+ + + + D ++++G H I+GR +V+HE
Sbjct: 63 PHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHE 122
Query: 434 RADDFGRTDHPDSRKTGNAGGRVAC 508
+ADD G+ + +S KTGNAG R+AC
Sbjct: 123 KADDLGKGGNEESTKTGNAGSRLAC 147
>AY450286-1|AAR21563.1| 154|Homo sapiens superoxide dismutase
protein.
Length = 154
Score = 146 bits (354), Expect = 4e-35
Identities = 70/145 (48%), Positives = 98/145 (67%), Gaps = 2/145 (1%)
Frame = +2
Query: 80 TRAIAHLVGEN-IRGNITFTRLP-DGKVHVEGSIVGLPPGHYGFHVHEKGDISGGCGSTG 253
T+A+ L G+ ++G I F + +G V V GSI GL G +GFHVHE GD + GC S G
Sbjct: 3 TKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAG 62
Query: 254 SHFNPENKEHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHE 433
HFNP +++HG P DE RHVGDLGN DK+ + + + D ++++G H I+GR +V+HE
Sbjct: 63 PHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHE 122
Query: 434 RADDFGRTDHPDSRKTGNAGGRVAC 508
+ADD G+ + +S KTGNAG R+AC
Sbjct: 123 KADDLGKGGNEESTKTGNAGSRLAC 147
>AY049787-1|AAL15444.1| 154|Homo sapiens soluble superoxide
dismutase 1 protein.
Length = 154
Score = 146 bits (354), Expect = 4e-35
Identities = 70/145 (48%), Positives = 98/145 (67%), Gaps = 2/145 (1%)
Frame = +2
Query: 80 TRAIAHLVGEN-IRGNITFTRLP-DGKVHVEGSIVGLPPGHYGFHVHEKGDISGGCGSTG 253
T+A+ L G+ ++G I F + +G V V GSI GL G +GFHVHE GD + GC S G
Sbjct: 3 TKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAG 62
Query: 254 SHFNPENKEHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHE 433
HFNP +++HG P DE RHVGDLGN DK+ + + + D ++++G H I+GR +V+HE
Sbjct: 63 PHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHE 122
Query: 434 RADDFGRTDHPDSRKTGNAGGRVAC 508
+ADD G+ + +S KTGNAG R+AC
Sbjct: 123 KADDLGKGGNEESTKTGNAGSRLAC 147
>L44139-2|AAB05662.1| 154|Homo sapiens Cu/Zn-superoxide dismutase
protein.
Length = 154
Score = 143 bits (347), Expect = 3e-34
Identities = 69/145 (47%), Positives = 97/145 (66%), Gaps = 2/145 (1%)
Frame = +2
Query: 80 TRAIAHLVGEN-IRGNITFTRLP-DGKVHVEGSIVGLPPGHYGFHVHEKGDISGGCGSTG 253
T+A+ L G+ ++G I F + +G V V GSI GL G +GFHVHE GD + GC S G
Sbjct: 3 TKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAG 62
Query: 254 SHFNPENKEHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHE 433
HFNP +++HG P DE RHVGDLGN DK+ + + + ++++G H I+GR +V+HE
Sbjct: 63 PHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEGSVISLSGDHCIIGRTLVVHE 122
Query: 434 RADDFGRTDHPDSRKTGNAGGRVAC 508
+ADD G+ + +S KTGNAG R+AC
Sbjct: 123 KADDLGKGGNEESTKTGNAGSRLAC 147
>CR541928-1|CAG46726.1| 274|Homo sapiens CCS protein.
Length = 274
Score = 122 bits (295), Expect = 5e-28
Identities = 59/142 (41%), Positives = 86/142 (60%), Gaps = 1/142 (0%)
Frame = +2
Query: 86 AIAHLVGEN-IRGNITFTRLPDGKVHVEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSHF 262
A+A L G ++G + F +L + +EG+I GL PG +G HVH+ GD++ C S G+HF
Sbjct: 89 AVAILGGPGTVQGVVRFLQLTPERCLIEGTIDGLEPGLHGLHVHQYGDLTNNCNSCGNHF 148
Query: 263 NPENKEHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHERAD 442
NP+ HG P D +RH GDLGN D + + M D L + ++GR++++ E D
Sbjct: 149 NPDGASHGGPQDSDRHRGDLGNVRADADGRAIFRMEDEQLKV---WDVIGRSLIIDEGED 205
Query: 443 DFGRTDHPDSRKTGNAGGRVAC 508
D GR HP S+ TGN+G R+AC
Sbjct: 206 DLGRGGHPLSKITGNSGERLAC 227
>BC112055-1|AAI12056.1| 274|Homo sapiens copper chaperone for
superoxide dismutase protein.
Length = 274
Score = 122 bits (295), Expect = 5e-28
Identities = 59/142 (41%), Positives = 86/142 (60%), Gaps = 1/142 (0%)
Frame = +2
Query: 86 AIAHLVGEN-IRGNITFTRLPDGKVHVEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSHF 262
A+A L G ++G + F +L + +EG+I GL PG +G HVH+ GD++ C S G+HF
Sbjct: 89 AVAILGGPGTVQGVVRFLQLTPERCLIEGTIDGLEPGLHGLHVHQYGDLTNNCNSCGNHF 148
Query: 263 NPENKEHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHERAD 442
NP+ HG P D +RH GDLGN D + + M D L + ++GR++++ E D
Sbjct: 149 NPDGASHGGPQDSDRHRGDLGNVRADADGRAIFRMEDEQLKV---WDVIGRSLIIDEGED 205
Query: 443 DFGRTDHPDSRKTGNAGGRVAC 508
D GR HP S+ TGN+G R+AC
Sbjct: 206 DLGRGGHPLSKITGNSGERLAC 227
>BC105016-1|AAI05017.1| 274|Homo sapiens copper chaperone for
superoxide dismutase protein.
Length = 274
Score = 122 bits (295), Expect = 5e-28
Identities = 59/142 (41%), Positives = 86/142 (60%), Gaps = 1/142 (0%)
Frame = +2
Query: 86 AIAHLVGEN-IRGNITFTRLPDGKVHVEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSHF 262
A+A L G ++G + F +L + +EG+I GL PG +G HVH+ GD++ C S G+HF
Sbjct: 89 AVAILGGPGTVQGVVRFLQLTPERCLIEGTIDGLEPGLHGLHVHQYGDLTNNCNSCGNHF 148
Query: 263 NPENKEHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHERAD 442
NP+ HG P D +RH GDLGN D + + M D L + ++GR++++ E D
Sbjct: 149 NPDGASHGGPQDSDRHRGDLGNVRADADGRAIFRMEDEQLKV---WDVIGRSLIIDEGED 205
Query: 443 DFGRTDHPDSRKTGNAGGRVAC 508
D GR HP S+ TGN+G R+AC
Sbjct: 206 DLGRGGHPLSKITGNSGERLAC 227
>AF002210-1|AAC51764.1| 274|Homo sapiens copper chaperone for
superoxide dismutase protein.
Length = 274
Score = 122 bits (295), Expect = 5e-28
Identities = 59/142 (41%), Positives = 86/142 (60%), Gaps = 1/142 (0%)
Frame = +2
Query: 86 AIAHLVGEN-IRGNITFTRLPDGKVHVEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSHF 262
A+A L G ++G + F +L + +EG+I GL PG +G HVH+ GD++ C S G+HF
Sbjct: 89 AVAILGGPGTVQGVVRFLQLTPERCLIEGTIDGLEPGLHGLHVHQYGDLTNNCNSCGNHF 148
Query: 263 NPENKEHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHERAD 442
NP+ HG P D +RH GDLGN D + + M D L + ++GR++++ E D
Sbjct: 149 NPDGASHGGPQDSDRHRGDLGNVRADADGRAIFRMEDEQLKV---WDVIGRSLIIDEGED 205
Query: 443 DFGRTDHPDSRKTGNAGGRVAC 508
D GR HP S+ TGN+G R+AC
Sbjct: 206 DLGRGGHPLSKITGNSGERLAC 227
>AY113179-1|AAM50090.1| 274|Homo sapiens superoxide dismutase
copper chaperone protein.
Length = 274
Score = 121 bits (292), Expect = 1e-27
Identities = 58/142 (40%), Positives = 86/142 (60%), Gaps = 1/142 (0%)
Frame = +2
Query: 86 AIAHLVGEN-IRGNITFTRLPDGKVHVEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSHF 262
A+A L G ++G + F +L + ++G+I GL PG +G HVH+ GD++ C S G+HF
Sbjct: 89 AVAILGGPGTVQGVVRFLQLTPERCLIDGTIDGLEPGLHGLHVHQYGDLTNNCNSCGNHF 148
Query: 263 NPENKEHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHERAD 442
NP+ HG P D +RH GDLGN D + + M D L + ++GR++++ E D
Sbjct: 149 NPDGASHGGPQDSDRHRGDLGNVRADADGRAIFRMEDEQLKV---WDVIGRSLIIDEGED 205
Query: 443 DFGRTDHPDSRKTGNAGGRVAC 508
D GR HP S+ TGN+G R+AC
Sbjct: 206 DLGRGGHPLSKITGNSGERLAC 227
>U10116-1|AAA62278.1| 240|Homo sapiens superoxide dismutase
protein.
Length = 240
Score = 74.1 bits (174), Expect = 3e-13
Identities = 49/137 (35%), Positives = 68/137 (49%), Gaps = 5/137 (3%)
Frame = +2
Query: 113 IRGNITFTRL-PDGKVHVEGSIVGLPP----GHYGFHVHEKGDISGGCGSTGSHFNPENK 277
+ G + F +L P K+ ++ G P HVH+ GD+S GC STG H+NP
Sbjct: 78 VTGVVLFRQLAPRAKLDAFFALEGFPTEPNSSSRAIHVHQFGDLSQGCESTGPHYNPLAV 137
Query: 278 EHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHERADDFGRT 457
H +H GD GN ++ S ++ G H I+GRAVV+H DD GR
Sbjct: 138 PHP------QHPGDFGNFAV-RDGSLWRYRAGLAASLAGPHSIVGRAVVVHAGEDDLGRG 190
Query: 458 DHPDSRKTGNAGGRVAC 508
+ S + GNAG R+AC
Sbjct: 191 GNQASVENGNAGRRLAC 207
>J02947-1|AAA66000.1| 240|Homo sapiens SOD3 protein.
Length = 240
Score = 74.1 bits (174), Expect = 3e-13
Identities = 49/137 (35%), Positives = 68/137 (49%), Gaps = 5/137 (3%)
Frame = +2
Query: 113 IRGNITFTRL-PDGKVHVEGSIVGLPP----GHYGFHVHEKGDISGGCGSTGSHFNPENK 277
+ G + F +L P K+ ++ G P HVH+ GD+S GC STG H+NP
Sbjct: 78 VTGVVLFRQLAPRAKLDAFFALEGFPTEPNSSSRAIHVHQFGDLSQGCESTGPHYNPLAV 137
Query: 278 EHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHERADDFGRT 457
H +H GD GN ++ S ++ G H I+GRAVV+H DD GR
Sbjct: 138 PHP------QHPGDFGNFAV-RDGSLWRYRAGLAASLAGPHSIVGRAVVVHAGEDDLGRG 190
Query: 458 DHPDSRKTGNAGGRVAC 508
+ S + GNAG R+AC
Sbjct: 191 GNQASVENGNAGRRLAC 207
>CR541853-1|CAG46651.1| 240|Homo sapiens SOD3 protein.
Length = 240
Score = 74.1 bits (174), Expect = 3e-13
Identities = 49/137 (35%), Positives = 68/137 (49%), Gaps = 5/137 (3%)
Frame = +2
Query: 113 IRGNITFTRL-PDGKVHVEGSIVGLPP----GHYGFHVHEKGDISGGCGSTGSHFNPENK 277
+ G + F +L P K+ ++ G P HVH+ GD+S GC STG H+NP
Sbjct: 78 VTGVVLFRQLAPRAKLDAFFALEGFPTEPNSSSRAIHVHQFGDLSQGCESTGPHYNPLAV 137
Query: 278 EHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHERADDFGRT 457
H +H GD GN ++ S ++ G H I+GRAVV+H DD GR
Sbjct: 138 PHP------QHPGDFGNFAV-RDGSLWRYRAGLAASLAGPHSIVGRAVVVHAGEDDLGRG 190
Query: 458 DHPDSRKTGNAGGRVAC 508
+ S + GNAG R+AC
Sbjct: 191 GNQASVENGNAGRRLAC 207
>BC014418-1|AAH14418.1| 240|Homo sapiens superoxide dismutase 3,
extracellular protein.
Length = 240
Score = 74.1 bits (174), Expect = 3e-13
Identities = 49/137 (35%), Positives = 68/137 (49%), Gaps = 5/137 (3%)
Frame = +2
Query: 113 IRGNITFTRL-PDGKVHVEGSIVGLPP----GHYGFHVHEKGDISGGCGSTGSHFNPENK 277
+ G + F +L P K+ ++ G P HVH+ GD+S GC STG H+NP
Sbjct: 78 VTGVVLFRQLAPRAKLDAFFALEGFPTEPNSSSRAIHVHQFGDLSQGCESTGPHYNPLAV 137
Query: 278 EHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHERADDFGRT 457
H +H GD GN ++ S ++ G H I+GRAVV+H DD GR
Sbjct: 138 PHP------QHPGDFGNFAV-RDGSLWRYRAGLAASLAGPHSIVGRAVVVHAGEDDLGRG 190
Query: 458 DHPDSRKTGNAGGRVAC 508
+ S + GNAG R+AC
Sbjct: 191 GNQASVENGNAGRRLAC 207
>AY787834-1|AAV40827.1| 240|Homo sapiens superoxide dismutase 3,
extracellular protein.
Length = 240
Score = 74.1 bits (174), Expect = 3e-13
Identities = 49/137 (35%), Positives = 68/137 (49%), Gaps = 5/137 (3%)
Frame = +2
Query: 113 IRGNITFTRL-PDGKVHVEGSIVGLPP----GHYGFHVHEKGDISGGCGSTGSHFNPENK 277
+ G + F +L P K+ ++ G P HVH+ GD+S GC STG H+NP
Sbjct: 78 VTGVVLFRQLAPRAKLDAFFALEGFPTEPNSSSRAIHVHQFGDLSQGCESTGPHYNPLAV 137
Query: 278 EHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHERADDFGRT 457
H +H GD GN ++ S ++ G H I+GRAVV+H DD GR
Sbjct: 138 PHP------QHPGDFGNFAV-RDGSLWRYRAGLAASLAGPHSIVGRAVVVHAGEDDLGRG 190
Query: 458 DHPDSRKTGNAGGRVAC 508
+ S + GNAG R+AC
Sbjct: 191 GNQASVENGNAGRRLAC 207
>X95228-1|CAA64520.1| 35|Homo sapiens Cu /Zn superoxide dismutase
protein.
Length = 35
Score = 41.5 bits (93), Expect = 0.002
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = +2
Query: 425 LHERADDFGRTDHPDSRKTGNAGGRVAC 508
+HE+ADD G+ + +S KTGNAG R+AC
Sbjct: 1 VHEKADDLGKGGNEESTKTGNAGSRLAC 28
>X01784-1|CAA25919.1| 35|Homo sapiens protein ( Human superoxide
dismutase (SOD-1) gene exon 5 and 3' flanking region.
).
Length = 35
Score = 41.5 bits (93), Expect = 0.002
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = +2
Query: 425 LHERADDFGRTDHPDSRKTGNAGGRVAC 508
+HE+ADD G+ + +S KTGNAG R+AC
Sbjct: 1 VHEKADDLGKGGNEESTKTGNAGSRLAC 28
>L46375-1|AAB59627.1| 35|Homo sapiens superoxide dismutase
protein.
Length = 35
Score = 38.7 bits (86), Expect = 0.012
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +2
Query: 425 LHERADDFGRTDHPDSRKTGNAGGRVAC 508
+HE+AD G+ + +S KTGNAG R+AC
Sbjct: 1 VHEKADHLGKGGNEESTKTGNAGSRLAC 28
>X01783-1|CAA25918.1| 39|Homo sapiens protein ( Human superoxide
dismutase (SOD-1) gene exon 4. ).
Length = 39
Score = 37.9 bits (84), Expect = 0.020
Identities = 16/39 (41%), Positives = 26/39 (66%)
Frame = +2
Query: 308 HVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVV 424
HVGDLGN DK+ + + + D ++++G H I+GR +V
Sbjct: 1 HVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLV 39
>X01781-1|CAA25916.1| 32|Homo sapiens protein ( Human superoxide
dismutase (SOD-1) gene exon 2. ).
Length = 32
Score = 36.7 bits (81), Expect = 0.046
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +2
Query: 146 DGKVHVEGSIVGLPPGHYGFHVHEKGD 226
+G V V GSI GL G +GFHVHE GD
Sbjct: 3 NGPVKVWGSIKGLTEGLHGFHVHEFGD 29
>L46374-1|AAB59626.1| 32|Homo sapiens superoxide dismutase
protein.
Length = 32
Score = 33.5 bits (73), Expect = 0.43
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = +2
Query: 146 DGKVHVEGSIVGLPPGHYGFHVHEKGD 226
+G V V GSI GL G +GFHV E GD
Sbjct: 3 NGPVKVWGSIKGLTEGLHGFHVQEFGD 29
>X82209-1|CAA57693.2| 1319|Homo sapiens MN1 protein protein.
Length = 1319
Score = 30.7 bits (66), Expect = 3.1
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +2
Query: 164 EGSIVGLPPGHYGFHVHEKGDI-SGGCGSTGSH--FNPENKEHGHPSDENRH 310
E I+G+ YGFH ++ +GG + H F + HGHP + H
Sbjct: 57 EPPILGMNMEPYGFHARGHSELHAGGLQAQPVHGFFGGQQPHHGHPGSHHPH 108
>EF540994-1|ABQ01232.1| 1322|Homo sapiens meningioma (disrupted in
balanced translocation) 1 protein.
Length = 1322
Score = 30.7 bits (66), Expect = 3.1
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +2
Query: 164 EGSIVGLPPGHYGFHVHEKGDI-SGGCGSTGSH--FNPENKEHGHPSDENRH 310
E I+G+ YGFH ++ +GG + H F + HGHP + H
Sbjct: 57 EPPILGMNMEPYGFHARGHSELHAGGLQAQPVHGFFGGQQPHHGHPGSHHPH 108
>AL390210-1|CAI17971.2| 1320|Homo sapiens meningioma (disrupted in
balanced translocation) 1 protein.
Length = 1320
Score = 30.7 bits (66), Expect = 3.1
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +2
Query: 164 EGSIVGLPPGHYGFHVHEKGDI-SGGCGSTGSH--FNPENKEHGHPSDENRH 310
E I+G+ YGFH ++ +GG + H F + HGHP + H
Sbjct: 57 EPPILGMNMEPYGFHARGHSELHAGGLQAQPVHGFFGGQQPHHGHPGSHHPH 108
>AL031591-1|CAI20309.2| 1320|Homo sapiens meningioma (disrupted in
balanced translocation) 1 protein.
Length = 1320
Score = 30.7 bits (66), Expect = 3.1
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +2
Query: 164 EGSIVGLPPGHYGFHVHEKGDI-SGGCGSTGSH--FNPENKEHGHPSDENRH 310
E I+G+ YGFH ++ +GG + H F + HGHP + H
Sbjct: 57 EPPILGMNMEPYGFHARGHSELHAGGLQAQPVHGFFGGQQPHHGHPGSHHPH 108
>DQ422807-1|ABD72606.1| 1427|Homo sapiens ADAM metallopeptidase with
thrombospondin type 1 motif, 13 protein.
Length = 1427
Score = 29.5 bits (63), Expect = 7.1
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -3
Query: 356 CWSSSCQIPRYQDPLRGGSRRSGDRA-LCFQG*NENRWSHNLRICLLSHGRGIRNGLVVA 180
C S+ ++P Q+ L G + + G R +C RW + L C +S GRG+ ++
Sbjct: 919 CMDSALRVP-VQEELCGLASKPGSRREVCQAVPCPARWQYKLAACSVSCGRGVVRRILYC 977
Query: 179 LR 174
R
Sbjct: 978 AR 979
>AY358118-1|AAQ88485.1| 1097|Homo sapiens ADAMTS13 protein.
Length = 1097
Score = 29.5 bits (63), Expect = 7.1
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -3
Query: 356 CWSSSCQIPRYQDPLRGGSRRSGDRA-LCFQG*NENRWSHNLRICLLSHGRGIRNGLVVA 180
C S+ ++P Q+ L G + + G R +C RW + L C +S GRG+ ++
Sbjct: 589 CMDSALRVP-VQEELCGLASKPGSRREVCQAVPCPARWQYKLAACSVSCGRGVVRRILYC 647
Query: 179 LR 174
R
Sbjct: 648 AR 649
>AY055376-1|AAL17652.1| 1427|Homo sapiens von Willebrand
factor-cleaving protease precursor protein.
Length = 1427
Score = 29.5 bits (63), Expect = 7.1
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -3
Query: 356 CWSSSCQIPRYQDPLRGGSRRSGDRA-LCFQG*NENRWSHNLRICLLSHGRGIRNGLVVA 180
C S+ ++P Q+ L G + + G R +C RW + L C +S GRG+ ++
Sbjct: 919 CMDSALRVP-VQEELCGLASKPGSRREVCQAVPCPARWQYKLAACSVSCGRGVVRRILYC 977
Query: 179 LR 174
R
Sbjct: 978 AR 979
>AL593848-11|CAI17258.1| 1371|Homo sapiens ADAM metallopeptidase with
thrombospondin type 1 motif, 13 protein.
Length = 1371
Score = 29.5 bits (63), Expect = 7.1
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -3
Query: 356 CWSSSCQIPRYQDPLRGGSRRSGDRA-LCFQG*NENRWSHNLRICLLSHGRGIRNGLVVA 180
C S+ ++P Q+ L G + + G R +C RW + L C +S GRG+ ++
Sbjct: 919 CMDSALRVP-VQEELCGLASKPGSRREVCQAVPCPARWQYKLAACSVSCGRGVVRRILYC 977
Query: 179 LR 174
R
Sbjct: 978 AR 979
>AL593848-10|CAI17256.1| 1427|Homo sapiens ADAM metallopeptidase with
thrombospondin type 1 motif, 13 protein.
Length = 1427
Score = 29.5 bits (63), Expect = 7.1
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -3
Query: 356 CWSSSCQIPRYQDPLRGGSRRSGDRA-LCFQG*NENRWSHNLRICLLSHGRGIRNGLVVA 180
C S+ ++P Q+ L G + + G R +C RW + L C +S GRG+ ++
Sbjct: 919 CMDSALRVP-VQEELCGLASKPGSRREVCQAVPCPARWQYKLAACSVSCGRGVVRRILYC 977
Query: 179 LR 174
R
Sbjct: 978 AR 979
>AL593848-9|CAI17257.1| 1340|Homo sapiens ADAM metallopeptidase with
thrombospondin type 1 motif, 13 protein.
Length = 1340
Score = 29.5 bits (63), Expect = 7.1
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -3
Query: 356 CWSSSCQIPRYQDPLRGGSRRSGDRA-LCFQG*NENRWSHNLRICLLSHGRGIRNGLVVA 180
C S+ ++P Q+ L G + + G R +C RW + L C +S GRG+ ++
Sbjct: 888 CMDSALRVP-VQEELCGLASKPGSRREVCQAVPCPARWQYKLAACSVSCGRGVVRRILYC 946
Query: 179 LR 174
R
Sbjct: 947 AR 948
>AL158826-24|CAI12851.1| 1371|Homo sapiens ADAM metallopeptidase with
thrombospondin type 1 motif, 13 protein.
Length = 1371
Score = 29.5 bits (63), Expect = 7.1
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -3
Query: 356 CWSSSCQIPRYQDPLRGGSRRSGDRA-LCFQG*NENRWSHNLRICLLSHGRGIRNGLVVA 180
C S+ ++P Q+ L G + + G R +C RW + L C +S GRG+ ++
Sbjct: 919 CMDSALRVP-VQEELCGLASKPGSRREVCQAVPCPARWQYKLAACSVSCGRGVVRRILYC 977
Query: 179 LR 174
R
Sbjct: 978 AR 979
>AL158826-23|CAI12850.1| 1427|Homo sapiens ADAM metallopeptidase with
thrombospondin type 1 motif, 13 protein.
Length = 1427
Score = 29.5 bits (63), Expect = 7.1
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -3
Query: 356 CWSSSCQIPRYQDPLRGGSRRSGDRA-LCFQG*NENRWSHNLRICLLSHGRGIRNGLVVA 180
C S+ ++P Q+ L G + + G R +C RW + L C +S GRG+ ++
Sbjct: 919 CMDSALRVP-VQEELCGLASKPGSRREVCQAVPCPARWQYKLAACSVSCGRGVVRRILYC 977
Query: 179 LR 174
R
Sbjct: 978 AR 979
>AL158826-22|CAI12852.1| 1340|Homo sapiens ADAM metallopeptidase with
thrombospondin type 1 motif, 13 protein.
Length = 1340
Score = 29.5 bits (63), Expect = 7.1
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -3
Query: 356 CWSSSCQIPRYQDPLRGGSRRSGDRA-LCFQG*NENRWSHNLRICLLSHGRGIRNGLVVA 180
C S+ ++P Q+ L G + + G R +C RW + L C +S GRG+ ++
Sbjct: 888 CMDSALRVP-VQEELCGLASKPGSRREVCQAVPCPARWQYKLAACSVSCGRGVVRRILYC 946
Query: 179 LR 174
R
Sbjct: 947 AR 948
>AJ420810-1|CAD12729.1| 1371|Homo sapiens ADAMTS-13 protein, variant 2
protein.
Length = 1371
Score = 29.5 bits (63), Expect = 7.1
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -3
Query: 356 CWSSSCQIPRYQDPLRGGSRRSGDRA-LCFQG*NENRWSHNLRICLLSHGRGIRNGLVVA 180
C S+ ++P Q+ L G + + G R +C RW + L C +S GRG+ ++
Sbjct: 919 CMDSALRVP-VQEELCGLASKPGSRREVCQAVPCPARWQYKLAACSVSCGRGVVRRILYC 977
Query: 179 LR 174
R
Sbjct: 978 AR 979
>AJ305314-1|CAC83682.1| 1340|Homo sapiens ADAMTS-13 protein protein.
Length = 1340
Score = 29.5 bits (63), Expect = 7.1
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -3
Query: 356 CWSSSCQIPRYQDPLRGGSRRSGDRA-LCFQG*NENRWSHNLRICLLSHGRGIRNGLVVA 180
C S+ ++P Q+ L G + + G R +C RW + L C +S GRG+ ++
Sbjct: 888 CMDSALRVP-VQEELCGLASKPGSRREVCQAVPCPARWQYKLAACSVSCGRGVVRRILYC 946
Query: 179 LR 174
R
Sbjct: 947 AR 948
>AF414401-1|AAL11095.1| 1427|Homo sapiens ADAMTS13 protein.
Length = 1427
Score = 29.5 bits (63), Expect = 7.1
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -3
Query: 356 CWSSSCQIPRYQDPLRGGSRRSGDRA-LCFQG*NENRWSHNLRICLLSHGRGIRNGLVVA 180
C S+ ++P Q+ L G + + G R +C RW + L C +S GRG+ ++
Sbjct: 919 CMDSALRVP-VQEELCGLASKPGSRREVCQAVPCPARWQYKLAACSVSCGRGVVRRILYC 977
Query: 179 LR 174
R
Sbjct: 978 AR 979
>AB069698-1|BAB69487.2| 1427|Homo sapiens von Willebrand
factor-cleaving protease protein.
Length = 1427
Score = 29.5 bits (63), Expect = 7.1
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -3
Query: 356 CWSSSCQIPRYQDPLRGGSRRSGDRA-LCFQG*NENRWSHNLRICLLSHGRGIRNGLVVA 180
C S+ ++P Q+ L G + + G R +C RW + L C +S GRG+ ++
Sbjct: 919 CMDSALRVP-VQEELCGLASKPGSRREVCQAVPCPARWQYKLAACSVSCGRGVVRRILYC 977
Query: 179 LR 174
R
Sbjct: 978 AR 979
>X74874-1|CAA52862.1| 1970|Homo sapiens RNA polymerase II largest
subunit protein.
Length = 1970
Score = 29.1 bits (62), Expect = 9.3
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -2
Query: 243 PQPPDMSPFSWTWNP*WPGGSPTIDPSTWTLPSGSRVNVILPLMFSPT 100
P P SP S T++P P SPT + T P GS + P +SPT
Sbjct: 1904 PTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP-GYSPT 1950
>X63564-1|CAA45125.1| 1970|Homo sapiens RNA polymerase II largest
subunit protein.
Length = 1970
Score = 29.1 bits (62), Expect = 9.3
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -2
Query: 243 PQPPDMSPFSWTWNP*WPGGSPTIDPSTWTLPSGSRVNVILPLMFSPT 100
P P SP S T++P P SPT + T P GS + P +SPT
Sbjct: 1904 PTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP-GYSPT 1950
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,510,293
Number of Sequences: 237096
Number of extensions: 1886750
Number of successful extensions: 8302
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 8034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8281
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4706589866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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