Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_F04
(508 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z27080-4|CAB61015.1| 176|Caenorhabditis elegans Hypothetical pr... 133 6e-32
AB190513-1|BAD51397.1| 221|Caenorhabditis elegans superoxide di... 133 6e-32
AB003924-1|BAA28262.1| 176|Caenorhabditis elegans SOD4-1 protein. 133 6e-32
X77020-1|CAA54318.1| 158|Caenorhabditis elegans copper/zinc sup... 131 2e-31
L20135-1|AAA28147.1| 158|Caenorhabditis elegans superoxide dism... 131 2e-31
AC006608-8|AAV34795.1| 158|Caenorhabditis elegans Sod (superoxi... 131 2e-31
AC006608-7|AAF39759.1| 180|Caenorhabditis elegans Sod (superoxi... 131 2e-31
U42833-3|AAA83577.1| 178|Caenorhabditis elegans Sod (superoxide... 120 6e-28
Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z81038-5|CAB02766.3| 970|Caenorhabditis elegans Hypothetical pr... 28 3.4
AB096631-1|BAC76731.1| 972|Caenorhabditis elegans isoleucyl-tRN... 28 3.4
Z48585-6|CAA88481.1| 284|Caenorhabditis elegans Hypothetical pr... 27 5.9
Z81506-2|CAB04129.1| 257|Caenorhabditis elegans Hypothetical pr... 27 7.8
>Z27080-4|CAB61015.1| 176|Caenorhabditis elegans Hypothetical
protein F55H2.1 protein.
Length = 176
Score = 133 bits (322), Expect = 6e-32
Identities = 61/142 (42%), Positives = 85/142 (59%)
Frame = +2
Query: 83 RAIAHLVGENIRGNITFTRLPDGKVHVEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSHF 262
+A A + + G I F + + + GS+ GL G +GFH+HEKGD GC S G H+
Sbjct: 30 KAEAGKIPTELIGTIDFDQ-SGSFLKLNGSVSGLAAGKHGFHIHEKGDTGNGCLSAGGHY 88
Query: 263 NPENKEHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHERAD 442
NP HG P D NRH+GDLGN E + + I + D +++G + I+GR+VV+HE+ D
Sbjct: 89 NPHKLSHGAPDDSNRHIGDLGNIESPASGDTLISVSDSLASLSGQYSIIGRSVVIHEKTD 148
Query: 443 DFGRTDHPDSRKTGNAGGRVAC 508
D GR S+ TGNAG R+AC
Sbjct: 149 DLGRGTSDQSKTTGNAGSRLAC 170
>AB190513-1|BAD51397.1| 221|Caenorhabditis elegans superoxide
dismutase protein.
Length = 221
Score = 133 bits (322), Expect = 6e-32
Identities = 61/142 (42%), Positives = 85/142 (59%)
Frame = +2
Query: 83 RAIAHLVGENIRGNITFTRLPDGKVHVEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSHF 262
+A A + + G I F + + + GS+ GL G +GFH+HEKGD GC S G H+
Sbjct: 30 KAEAGKIPTELIGTIDFDQ-SGSFLKLNGSVSGLAAGKHGFHIHEKGDTGNGCLSAGGHY 88
Query: 263 NPENKEHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHERAD 442
NP HG P D NRH+GDLGN E + + I + D +++G + I+GR+VV+HE+ D
Sbjct: 89 NPHKLSHGAPDDSNRHIGDLGNIESPASGDTLISVSDSLASLSGQYSIIGRSVVIHEKTD 148
Query: 443 DFGRTDHPDSRKTGNAGGRVAC 508
D GR S+ TGNAG R+AC
Sbjct: 149 DLGRGTSDQSKTTGNAGSRLAC 170
>AB003924-1|BAA28262.1| 176|Caenorhabditis elegans SOD4-1 protein.
Length = 176
Score = 133 bits (322), Expect = 6e-32
Identities = 61/142 (42%), Positives = 85/142 (59%)
Frame = +2
Query: 83 RAIAHLVGENIRGNITFTRLPDGKVHVEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSHF 262
+A A + + G I F + + + GS+ GL G +GFH+HEKGD GC S G H+
Sbjct: 30 KAEAGKIPTELIGTIDFDQ-SGSFLKLNGSVSGLAAGKHGFHIHEKGDTGNGCLSAGGHY 88
Query: 263 NPENKEHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHERAD 442
NP HG P D NRH+GDLGN E + + I + D +++G + I+GR+VV+HE+ D
Sbjct: 89 NPHKLSHGAPDDSNRHIGDLGNIESPASGDTLISVSDSLASLSGQYSIIGRSVVIHEKTD 148
Query: 443 DFGRTDHPDSRKTGNAGGRVAC 508
D GR S+ TGNAG R+AC
Sbjct: 149 DLGRGTSDQSKTTGNAGSRLAC 170
>X77020-1|CAA54318.1| 158|Caenorhabditis elegans copper/zinc
superoxide dismutase protein.
Length = 158
Score = 131 bits (317), Expect = 2e-31
Identities = 66/146 (45%), Positives = 88/146 (60%), Gaps = 4/146 (2%)
Frame = +2
Query: 83 RAIAHLVGENIRGNITFTRLPDG-KVHVEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSH 259
RA+A L GE + G I T+ + + +EG I GL PG +GFHVH+ GD + GC S G H
Sbjct: 4 RAVAVLRGETVTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISAGPH 63
Query: 260 FNPENKEHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHERA 439
FNP K HG P E RHVGDLGN E + +KI + D + + G + ++GR++V+H
Sbjct: 64 FNPFGKTHGGPKSEIRHVGDLGNVEAGADGVAKIKLTDTLVTLYGPNTVVGRSMVVHAGQ 123
Query: 440 DDFGR---TDHPDSRKTGNAGGRVAC 508
DD G +S+KTGNAG R AC
Sbjct: 124 DDLGEGVGDKAEESKKTGNAGARAAC 149
>L20135-1|AAA28147.1| 158|Caenorhabditis elegans superoxide
dismutase protein.
Length = 158
Score = 131 bits (317), Expect = 2e-31
Identities = 66/146 (45%), Positives = 88/146 (60%), Gaps = 4/146 (2%)
Frame = +2
Query: 83 RAIAHLVGENIRGNITFTRLPDG-KVHVEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSH 259
RA+A L GE + G I T+ + + +EG I GL PG +GFHVH+ GD + GC S G H
Sbjct: 4 RAVAVLRGETVTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISAGPH 63
Query: 260 FNPENKEHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHERA 439
FNP K HG P E RHVGDLGN E + +KI + D + + G + ++GR++V+H
Sbjct: 64 FNPFGKTHGGPKSEIRHVGDLGNVEAGADGVAKIKLTDTLVTLYGPNTVVGRSMVVHAGQ 123
Query: 440 DDFGR---TDHPDSRKTGNAGGRVAC 508
DD G +S+KTGNAG R AC
Sbjct: 124 DDLGEGVGDKAEESKKTGNAGARAAC 149
>AC006608-8|AAV34795.1| 158|Caenorhabditis elegans Sod (superoxide
dismutase) protein1, isoform b protein.
Length = 158
Score = 131 bits (317), Expect = 2e-31
Identities = 66/146 (45%), Positives = 88/146 (60%), Gaps = 4/146 (2%)
Frame = +2
Query: 83 RAIAHLVGENIRGNITFTRLPDG-KVHVEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSH 259
RA+A L GE + G I T+ + + +EG I GL PG +GFHVH+ GD + GC S G H
Sbjct: 4 RAVAVLRGETVTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISAGPH 63
Query: 260 FNPENKEHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHERA 439
FNP K HG P E RHVGDLGN E + +KI + D + + G + ++GR++V+H
Sbjct: 64 FNPFGKTHGGPKSEIRHVGDLGNVEAGADGVAKIKLTDTLVTLYGPNTVVGRSMVVHAGQ 123
Query: 440 DDFGR---TDHPDSRKTGNAGGRVAC 508
DD G +S+KTGNAG R AC
Sbjct: 124 DDLGEGVGDKAEESKKTGNAGARAAC 149
>AC006608-7|AAF39759.1| 180|Caenorhabditis elegans Sod (superoxide
dismutase) protein1, isoform a protein.
Length = 180
Score = 131 bits (317), Expect = 2e-31
Identities = 66/146 (45%), Positives = 88/146 (60%), Gaps = 4/146 (2%)
Frame = +2
Query: 83 RAIAHLVGENIRGNITFTRLPDG-KVHVEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSH 259
RA+A L GE + G I T+ + + +EG I GL PG +GFHVH+ GD + GC S G H
Sbjct: 26 RAVAVLRGETVTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISAGPH 85
Query: 260 FNPENKEHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHERA 439
FNP K HG P E RHVGDLGN E + +KI + D + + G + ++GR++V+H
Sbjct: 86 FNPFGKTHGGPKSEIRHVGDLGNVEAGADGVAKIKLTDTLVTLYGPNTVVGRSMVVHAGQ 145
Query: 440 DDFGR---TDHPDSRKTGNAGGRVAC 508
DD G +S+KTGNAG R AC
Sbjct: 146 DDLGEGVGDKAEESKKTGNAGARAAC 171
>U42833-3|AAA83577.1| 178|Caenorhabditis elegans Sod (superoxide
dismutase) protein5 protein.
Length = 178
Score = 120 bits (289), Expect = 6e-28
Identities = 62/146 (42%), Positives = 85/146 (58%), Gaps = 4/146 (2%)
Frame = +2
Query: 83 RAIAHLVGENIRGNITFTRLPDGK-VHVEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSH 259
RA+A L G + G + T+ +G+ EG I GL PG +GFH+H+ GD + GC S G H
Sbjct: 24 RAVAVLRGTAVFGTVWLTQKAEGEETEFEGEIKGLSPGLHGFHIHQYGDSTDGCTSAGPH 83
Query: 260 FNPENKEHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHERA 439
FNP HG RHVGDLGN E + +KI D +++ GA+ ++GR++V+H
Sbjct: 84 FNPCKMNHGGRDSVVRHVGDLGNVEAGADGVAKIKFSDKVVSLFGANTVIGRSMVVHVDR 143
Query: 440 DDFGR---TDHPDSRKTGNAGGRVAC 508
DD G+ +S KTGNAG R AC
Sbjct: 144 DDLGQGIDDKAEESLKTGNAGARAAC 169
>Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical protein
T01D3.3b protein.
Length = 1011
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = +2
Query: 80 TRAIAHLV---GENIRGNITFTRLPDGKVHVEGSIVGLPPGHYGFHVHEKGDISGGCGST 250
T A+A L+ G +I G TF++L + + G + LP G + +H+ GD S GC
Sbjct: 882 TIAVAILITREGAHI-GRFTFSQLTSTALRIHGEVYTLPVGRHAVVLHQFGDSSEGCSRV 940
Query: 251 GSHFN 265
G+ F+
Sbjct: 941 GAPFS 945
>Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical
protein T01D3.3a protein.
Length = 802
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = +2
Query: 80 TRAIAHLV---GENIRGNITFTRLPDGKVHVEGSIVGLPPGHYGFHVHEKGDISGGCGST 250
T A+A L+ G +I G TF++L + + G + LP G + +H+ GD S GC
Sbjct: 673 TIAVAILITREGAHI-GRFTFSQLTSTALRIHGEVYTLPVGRHAVVLHQFGDSSEGCSRV 731
Query: 251 GSHFN 265
G+ F+
Sbjct: 732 GAPFS 736
>Z81038-5|CAB02766.3| 970|Caenorhabditis elegans Hypothetical
protein C25A1.7 protein.
Length = 970
Score = 28.3 bits (60), Expect = 3.4
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -3
Query: 374 GRSYQSCWSSSCQIPRYQDP 315
GR Y+SCW + +P Y+ P
Sbjct: 349 GRRYKSCWHNELGLPIYEGP 368
>AB096631-1|BAC76731.1| 972|Caenorhabditis elegans isoleucyl-tRNA
synthetase (mitochondrial)protein.
Length = 972
Score = 28.3 bits (60), Expect = 3.4
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -3
Query: 374 GRSYQSCWSSSCQIPRYQDP 315
GR Y+SCW + +P Y+ P
Sbjct: 349 GRRYKSCWHNELGLPIYEGP 368
>Z48585-6|CAA88481.1| 284|Caenorhabditis elegans Hypothetical
protein ZK673.6 protein.
Length = 284
Score = 27.5 bits (58), Expect = 5.9
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = -3
Query: 506 RRRVHQRCRFFSNLGGQCGRNHQPARVEPQPCRESRVLR*WRDAGRSYQS 357
RR+ ++ + +L QC + H+ + CRE L+ + AGR + +
Sbjct: 173 RRKKVEKTQILPDLRDQCTKYHKAVHTLDEQCRELDNLKEYVRAGRHFHN 222
>Z81506-2|CAB04129.1| 257|Caenorhabditis elegans Hypothetical
protein F16H6.3 protein.
Length = 257
Score = 27.1 bits (57), Expect = 7.8
Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = -2
Query: 447 KSSARSCRTTALPRIPCAPVM-ARC 376
K+SA +CR PR+ CA ++ A+C
Sbjct: 112 KTSAYNCRNADFPRLNCATILPAQC 136
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,362,241
Number of Sequences: 27780
Number of extensions: 276832
Number of successful extensions: 742
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 737
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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