Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_F02
(447 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L06498-1|AAA60286.1| 119|Homo sapiens ribosomal protein S20 pro... 196 2e-50
BC087850-1|AAH87850.1| 119|Homo sapiens ribosomal protein S20 p... 196 2e-50
BC007507-1|AAH07507.1| 119|Homo sapiens ribosomal protein S20 p... 196 2e-50
AB061842-1|BAB79480.1| 119|Homo sapiens ribosomal protein S20 p... 196 2e-50
AB007156-1|BAA25820.1| 60|Homo sapiens ribosomal protein S20 p... 124 1e-28
M54992-1|AAA36189.1| 359|Homo sapiens B cell differentiation an... 29 9.5
M16276-1|AAA59823.1| 269|Homo sapiens HLA-DRB2 protein. 29 9.5
EF064751-1|ABK41934.1| 359|Homo sapiens CD72 molecule protein. 29 9.5
BC030227-1|AAH30227.1| 359|Homo sapiens CD72 molecule protein. 29 9.5
AY663414-1|AAU88032.1| 261|Homo sapiens MHC class II antigen pr... 29 9.5
AY375869-1|AAQ88043.1| 234|Homo sapiens MHC class II antigen pr... 29 9.5
AY375868-1|AAQ88042.1| 234|Homo sapiens MHC class II antigen pr... 29 9.5
AL357874-2|CAI13442.1| 359|Homo sapiens CD72 molecule protein. 29 9.5
AF000447-1|AAB86436.1| 255|Homo sapiens MHC class II HLA-DQB1 p... 29 9.5
AB180959-1|BAD72864.1| 359|Homo sapiens CD72 antigen protein. 29 9.5
AB180958-1|BAD72863.1| 359|Homo sapiens CD72 antigen protein. 29 9.5
AB180956-1|BAD72861.1| 359|Homo sapiens CD72 antigen protein. 29 9.5
AB180955-1|BAD72860.1| 359|Homo sapiens CD72 antigen protein. 29 9.5
AB180954-1|BAD72859.1| 359|Homo sapiens CD72 antigen protein. 29 9.5
AB180953-1|BAD72858.1| 359|Homo sapiens CD72 antigen protein. 29 9.5
AB180952-1|BAD72857.1| 359|Homo sapiens CD72 antigen protein. 29 9.5
>L06498-1|AAA60286.1| 119|Homo sapiens ribosomal protein S20
protein.
Length = 119
Score = 196 bits (479), Expect = 2e-50
Identities = 96/116 (82%), Positives = 103/116 (88%), Gaps = 1/116 (0%)
Frame = +3
Query: 102 KDIEKPQAEIS-PIHRIRITLTSRNVRSLEKVCSDLINGAKKQKLRVKGPVRMPTNVLRI 278
KD K E IHRIRITLTSRNV+SLEKVC+DLI GAK++ L+VKGPVRMPT LRI
Sbjct: 4 KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63
Query: 279 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIADA 446
TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVKQITSI+IEPGVEVEVTIADA
Sbjct: 64 TTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
>BC087850-1|AAH87850.1| 119|Homo sapiens ribosomal protein S20
protein.
Length = 119
Score = 196 bits (479), Expect = 2e-50
Identities = 96/116 (82%), Positives = 103/116 (88%), Gaps = 1/116 (0%)
Frame = +3
Query: 102 KDIEKPQAEIS-PIHRIRITLTSRNVRSLEKVCSDLINGAKKQKLRVKGPVRMPTNVLRI 278
KD K E IHRIRITLTSRNV+SLEKVC+DLI GAK++ L+VKGPVRMPT LRI
Sbjct: 4 KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63
Query: 279 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIADA 446
TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVKQITSI+IEPGVEVEVTIADA
Sbjct: 64 TTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
>BC007507-1|AAH07507.1| 119|Homo sapiens ribosomal protein S20
protein.
Length = 119
Score = 196 bits (479), Expect = 2e-50
Identities = 96/116 (82%), Positives = 103/116 (88%), Gaps = 1/116 (0%)
Frame = +3
Query: 102 KDIEKPQAEIS-PIHRIRITLTSRNVRSLEKVCSDLINGAKKQKLRVKGPVRMPTNVLRI 278
KD K E IHRIRITLTSRNV+SLEKVC+DLI GAK++ L+VKGPVRMPT LRI
Sbjct: 4 KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63
Query: 279 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIADA 446
TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVKQITSI+IEPGVEVEVTIADA
Sbjct: 64 TTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
>AB061842-1|BAB79480.1| 119|Homo sapiens ribosomal protein S20
protein.
Length = 119
Score = 196 bits (479), Expect = 2e-50
Identities = 96/116 (82%), Positives = 103/116 (88%), Gaps = 1/116 (0%)
Frame = +3
Query: 102 KDIEKPQAEIS-PIHRIRITLTSRNVRSLEKVCSDLINGAKKQKLRVKGPVRMPTNVLRI 278
KD K E IHRIRITLTSRNV+SLEKVC+DLI GAK++ L+VKGPVRMPT LRI
Sbjct: 4 KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63
Query: 279 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIADA 446
TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVKQITSI+IEPGVEVEVTIADA
Sbjct: 64 TTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
>AB007156-1|BAA25820.1| 60|Homo sapiens ribosomal protein S20
protein.
Length = 60
Score = 124 bits (299), Expect = 1e-28
Identities = 56/60 (93%), Positives = 58/60 (96%)
Frame = +3
Query: 240 KGPVRMPTNVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGV 419
KGPVRMPT LRITTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVKQITSI+IEPGV
Sbjct: 1 KGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGV 60
>M54992-1|AAA36189.1| 359|Homo sapiens B cell differentiation
antigen protein.
Length = 359
Score = 28.7 bits (61), Expect = 9.5
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = -1
Query: 345 CGCASGICPKSWNPHRK-VFYVL*CGEHW 262
CG A CP W H+K FY+ ++W
Sbjct: 226 CGSADTCCPSGWIMHQKSCFYISLTSKNW 254
>M16276-1|AAA59823.1| 269|Homo sapiens HLA-DRB2 protein.
Length = 269
Score = 28.7 bits (61), Expect = 9.5
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +3
Query: 222 KQKLRVKGPVRMPTNVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQIT 395
K+ LR+ G +R PT L + TP EG + F ++ K + + +E V+ +T
Sbjct: 4 KKALRIPGGLRAPTVTLMLAMLSTPVAEGRDPPEDFVLQF-KAMCYFTNGTERVRYVT 60
>EF064751-1|ABK41934.1| 359|Homo sapiens CD72 molecule protein.
Length = 359
Score = 28.7 bits (61), Expect = 9.5
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = -1
Query: 345 CGCASGICPKSWNPHRK-VFYVL*CGEHW 262
CG A CP W H+K FY+ ++W
Sbjct: 226 CGSADTCCPSGWIMHQKSCFYISLTSKNW 254
>BC030227-1|AAH30227.1| 359|Homo sapiens CD72 molecule protein.
Length = 359
Score = 28.7 bits (61), Expect = 9.5
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = -1
Query: 345 CGCASGICPKSWNPHRK-VFYVL*CGEHW 262
CG A CP W H+K FY+ ++W
Sbjct: 226 CGSADTCCPSGWIMHQKSCFYISLTSKNW 254
>AY663414-1|AAU88032.1| 261|Homo sapiens MHC class II antigen
protein.
Length = 261
Score = 28.7 bits (61), Expect = 9.5
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +3
Query: 222 KQKLRVKGPVRMPTNVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQIT 395
K+ LR+ G +R PT L + TP EG + F ++ K + + +E V+ +T
Sbjct: 4 KKALRIPGGLRAPTVTLMLAMLSTPVAEGRDPPEDFVLQF-KAMCYFTNGTERVRYVT 60
>AY375869-1|AAQ88043.1| 234|Homo sapiens MHC class II antigen
protein.
Length = 234
Score = 28.7 bits (61), Expect = 9.5
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +3
Query: 222 KQKLRVKGPVRMPTNVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQIT 395
K+ LR+ G +R PT L + TP EG + F ++ K + + +E V+ +T
Sbjct: 4 KKALRIPGGLRAPTVTLMLAMLSTPVAEGRDPPEDFVLQF-KAMCYFTNGTERVRYVT 60
>AY375868-1|AAQ88042.1| 234|Homo sapiens MHC class II antigen
protein.
Length = 234
Score = 28.7 bits (61), Expect = 9.5
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +3
Query: 222 KQKLRVKGPVRMPTNVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQIT 395
K+ LR+ G +R PT L + TP EG + F ++ K + + +E V+ +T
Sbjct: 4 KKALRIPGGLRAPTVTLMLAMLSTPVAEGRDPPEDFVLQF-KAMCYFTNGTERVRYVT 60
>AL357874-2|CAI13442.1| 359|Homo sapiens CD72 molecule protein.
Length = 359
Score = 28.7 bits (61), Expect = 9.5
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = -1
Query: 345 CGCASGICPKSWNPHRK-VFYVL*CGEHW 262
CG A CP W H+K FY+ ++W
Sbjct: 226 CGSADTCCPSGWIMHQKSCFYISLTSKNW 254
>AF000447-1|AAB86436.1| 255|Homo sapiens MHC class II HLA-DQB1
protein.
Length = 255
Score = 28.7 bits (61), Expect = 9.5
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +3
Query: 222 KQKLRVKGPVRMPTNVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQIT 395
K+ LR+ G +R PT L + TP EG + F ++ K + + +E V+ +T
Sbjct: 1 KKALRIPGGLRAPTVTLMLAMLSTPVAEGRDPPEDFVLQF-KAMCYFTNGTERVRYVT 57
>AB180959-1|BAD72864.1| 359|Homo sapiens CD72 antigen protein.
Length = 359
Score = 28.7 bits (61), Expect = 9.5
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = -1
Query: 345 CGCASGICPKSWNPHRK-VFYVL*CGEHW 262
CG A CP W H+K FY+ ++W
Sbjct: 226 CGSADTCCPSGWIMHQKSCFYISLTSKNW 254
>AB180958-1|BAD72863.1| 359|Homo sapiens CD72 antigen protein.
Length = 359
Score = 28.7 bits (61), Expect = 9.5
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = -1
Query: 345 CGCASGICPKSWNPHRK-VFYVL*CGEHW 262
CG A CP W H+K FY+ ++W
Sbjct: 226 CGSADTCCPSGWIMHQKNCFYISLTSKNW 254
>AB180956-1|BAD72861.1| 359|Homo sapiens CD72 antigen protein.
Length = 359
Score = 28.7 bits (61), Expect = 9.5
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = -1
Query: 345 CGCASGICPKSWNPHRK-VFYVL*CGEHW 262
CG A CP W H+K FY+ ++W
Sbjct: 226 CGSADTCCPSGWIMHQKSCFYISLTSKNW 254
>AB180955-1|BAD72860.1| 359|Homo sapiens CD72 antigen protein.
Length = 359
Score = 28.7 bits (61), Expect = 9.5
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = -1
Query: 345 CGCASGICPKSWNPHRK-VFYVL*CGEHW 262
CG A CP W H+K FY+ ++W
Sbjct: 226 CGSADTCCPSGWIMHQKSCFYISLTSKNW 254
>AB180954-1|BAD72859.1| 359|Homo sapiens CD72 antigen protein.
Length = 359
Score = 28.7 bits (61), Expect = 9.5
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = -1
Query: 345 CGCASGICPKSWNPHRK-VFYVL*CGEHW 262
CG A CP W H+K FY+ ++W
Sbjct: 226 CGSADTCCPSGWIMHQKSCFYISLTSKNW 254
>AB180953-1|BAD72858.1| 359|Homo sapiens CD72 antigen protein.
Length = 359
Score = 28.7 bits (61), Expect = 9.5
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = -1
Query: 345 CGCASGICPKSWNPHRK-VFYVL*CGEHW 262
CG A CP W H+K FY+ ++W
Sbjct: 226 CGSADTCCPSGWIMHQKSCFYISLTSKNW 254
>AB180952-1|BAD72857.1| 359|Homo sapiens CD72 antigen protein.
Length = 359
Score = 28.7 bits (61), Expect = 9.5
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = -1
Query: 345 CGCASGICPKSWNPHRK-VFYVL*CGEHW 262
CG A CP W H+K FY+ ++W
Sbjct: 226 CGSADTCCPSGWIMHQKSCFYISLTSKNW 254
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,381,258
Number of Sequences: 237096
Number of extensions: 1575229
Number of successful extensions: 3805
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3804
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3644351872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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