Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_F01
         (450 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     27   0.12 
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    25   0.29 
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    25   0.38 
AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         23   1.2  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   6.2  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                21   8.2  

>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 26.6 bits (56), Expect = 0.12
 Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
 Frame = -3

Query: 199 TIPQSALTFAKFTINKI*TKQRSIFILQTHILR-LYGTNTR*TLGS-CKVICVLFIIFMR 26
           T+ + A T  + T NK+  + +++FIL   I+R + GT T     + C VI ++ +    
Sbjct: 181 TMNKIAETLDEDTKNKLIEESKTVFILNNEIIRSIQGTGTIILKKTVCFVIPIMLLFLAF 240

Query: 25  *TRFREI 5
              FR+I
Sbjct: 241 FVSFRKI 247


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 25.4 bits (53), Expect = 0.29
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = -2

Query: 140 TKKHIHPTNSYITSIRNKYEINTG*LQSNLCSFYNIYEIN 21
           + K IH  N+Y  +  NKY  N       L  +Y  Y IN
Sbjct: 86  SNKTIHNNNNYKYNYNNKYNYNNNNYNKKL--YYKNYIIN 123


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 25.0 bits (52), Expect = 0.38
 Identities = 13/43 (30%), Positives = 18/43 (41%)
 Frame = -2

Query: 140 TKKHIHPTNSYITSIRNKYEINTG*LQSNLCSFYNIYEINPFP 12
           + K IH  N+Y  +  N Y  N     +    +YNI  I   P
Sbjct: 86  SNKTIHNNNNYNNNNYNNYNYNNNNYNNYKKLYYNINYIEQIP 128



 Score = 23.8 bits (49), Expect = 0.88
 Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
 Frame = -1

Query: 150 YKQNKEAYSSYKLIYY--VYTEQI 85
           Y  N   Y++YK +YY   Y EQI
Sbjct: 104 YNYNNNNYNNYKKLYYNINYIEQI 127


>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 147 YILFIVNFAKVNADCGIVSKDDWDG 221
           ++LF +  A V+A C  V K  +DG
Sbjct: 4   FVLFAILIAIVHASCASVPKVVYDG 28


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = -2

Query: 197 NTAVRVNLCKVYDKQDINKTKKH 129
           NTA  ++ C++     +NK   H
Sbjct: 565 NTAATLSFCEMIHNAQVNKRSIH 587


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -3

Query: 334 LLTRAAHASFVKHCGV 287
           +L    HASF+KH  +
Sbjct: 104 MLNSEKHASFLKHSNI 119


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,298
Number of Sequences: 438
Number of extensions: 3440
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11820384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)