Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_E24
(542 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000DB7985 Cluster: PREDICTED: similar to Collagen t... 168 8e-41
UniRef50_Q4SZ73 Cluster: Chromosome undetermined SCAF11805, whol... 155 8e-37
UniRef50_UPI0000613E3C Cluster: Collagen alpha-2(IV) chain; n=2;... 154 1e-36
UniRef50_P08120 Cluster: Collagen alpha-1(IV) chain precursor; n... 154 1e-36
UniRef50_P08572 Cluster: Collagen alpha-2(IV) chain precursor [C... 153 2e-36
UniRef50_P29400 Cluster: Collagen alpha-5(IV) chain precursor; n... 153 3e-36
UniRef50_Q07265 Cluster: 3 alpha procollagen; n=4; Strongylocent... 144 1e-33
UniRef50_P17139-2 Cluster: Isoform b of P17139 ; n=2; Caenorhabd... 142 5e-33
UniRef50_P55787 Cluster: Collagen alpha-4(IV) chain; n=46; Eumet... 139 4e-32
UniRef50_P53420 Cluster: Collagen alpha-4(IV) chain precursor; n... 138 8e-32
UniRef50_Q26640 Cluster: Alpha2(IV)-like collagen; n=4; Strongyl... 137 2e-31
UniRef50_UPI00015B49AB Cluster: PREDICTED: similar to alpha-5 ty... 136 3e-31
UniRef50_Q4SZ69 Cluster: Chromosome undetermined SCAF11805, whol... 105 4e-31
UniRef50_Q28084 Cluster: Collagen alpha-3(IV) chain; n=13; cellu... 134 1e-30
UniRef50_Q01955 Cluster: Collagen alpha-3(IV) chain precursor (G... 132 7e-30
UniRef50_Q58FS7 Cluster: Type IV collagen alpha 3 chain; n=2; Da... 130 2e-29
UniRef50_Q4S0I4 Cluster: Chromosome 2 SCAF14781, whole genome sh... 126 2e-28
UniRef50_Q7PVR6 Cluster: ENSANGP00000016652; n=3; Endopterygota|... 124 1e-27
UniRef50_Q9VMV5 Cluster: CG16858-PA; n=6; Schizophora|Rep: CG168... 123 2e-27
UniRef50_UPI000065E566 Cluster: Homolog of Homo sapiens "Splice ... 120 2e-26
UniRef50_UPI00006608B5 Cluster: Homolog of Homo sapiens "Tumstat... 119 5e-26
UniRef50_UPI000065E567 Cluster: Homolog of Brachydanio rerio "Co... 117 2e-25
UniRef50_Q9GQB1 Cluster: Type IV collagen alpha 1 chain precurso... 116 5e-25
UniRef50_UPI00015A592A Cluster: Type IV collagen alpha 4 chain; ... 99 6e-20
UniRef50_Q4TZW9 Cluster: Type IV collagen alpha 4 chain; n=3; Da... 99 6e-20
UniRef50_O09238 Cluster: Collagen type IV; n=2; Pseudocorticium ... 89 6e-17
UniRef50_Q5C3P1 Cluster: SJCHGC06113 protein; n=2; Platyhelminth... 88 1e-16
UniRef50_UPI0000DA44CD Cluster: PREDICTED: similar to procollage... 68 1e-10
UniRef50_UPI0000DBF028 Cluster: UPI0000DBF028 related cluster; n... 68 1e-10
UniRef50_Q5BYE6 Cluster: SJCHGC08138 protein; n=1; Schistosoma j... 59 7e-08
UniRef50_Q4SB07 Cluster: Chromosome undetermined SCAF14677, whol... 54 2e-06
UniRef50_A7T795 Cluster: Predicted protein; n=1; Nematostella ve... 48 2e-04
UniRef50_A7T3G2 Cluster: Predicted protein; n=1; Nematostella ve... 48 2e-04
UniRef50_A1ZSZ5 Cluster: Putative uncharacterized protein; n=1; ... 34 2.4
UniRef50_Q24BC9 Cluster: Putative uncharacterized protein; n=1; ... 33 4.3
>UniRef50_UPI0000DB7985 Cluster: PREDICTED: similar to Collagen type
IV CG4145-PA, isoform A isoform 1; n=1; Apis
mellifera|Rep: PREDICTED: similar to Collagen type IV
CG4145-PA, isoform A isoform 1 - Apis mellifera
Length = 1913
Score = 168 bits (408), Expect = 8e-41
Identities = 71/113 (62%), Positives = 86/113 (76%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
+AVHSQ+L+IP CP GW+ LWIGYSF+MHT L+S GSCLEDFRA PFIECN
Sbjct: 1801 LAVHSQSLNIPDCPQGWTGLWIGYSFLMHTGAGAQGGGQSLSSSGSCLEDFRATPFIECN 1860
Query: 182 GEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIKNT 340
G G CH++ N++SFW+ TIED QQF PE+QTLK+G L ++SRC VCIKNT
Sbjct: 1861 GNKGQCHYYMNEISFWMATIEDRQQFQAPEQQTLKAGNLRSKISRCQVCIKNT 1913
Score = 34.3 bits (75), Expect(2) = 0.004
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +2
Query: 134 GSCLEDFRAIPFIECNGEGGTCHHFANK--LSFWLTTIEDSQQFAMPERQTLKSGRLLER 307
GSC+ F +PF+ C+ C H+ N+ S+WL+T MP ++ + +
Sbjct: 1736 GSCVRKFSTMPFLFCD-INNVC-HYGNRGDRSYWLSTTSPIPM--MP----VQESEIEQY 1787
Query: 308 VSRCAVC 328
+SRC VC
Sbjct: 1788 ISRCVVC 1794
Score = 27.9 bits (59), Expect(2) = 0.004
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 11 HSQTLDIPGCPVGWSELWIGYSFV 82
HSQ+ +P C G +LW GYS +
Sbjct: 1672 HSQSQLLPVCDAGHIKLWEGYSLL 1695
>UniRef50_Q4SZ73 Cluster: Chromosome undetermined SCAF11805, whole
genome shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome undetermined SCAF11805, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 1026
Score = 155 bits (375), Expect = 8e-37
Identities = 68/112 (60%), Positives = 80/112 (71%), Gaps = 1/112 (0%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
+AVHSQ + IP CP GW LWIGYSF+MHT L SPGSCLEDFRA PFIECN
Sbjct: 915 VAVHSQDMTIPTCPPGWRSLWIGYSFLMHTAAGAEGGGQSLVSPGSCLEDFRATPFIECN 974
Query: 182 GEGGTCHHFANKLSFWLTTIEDSQQ-FAMPERQTLKSGRLLERVSRCAVCIK 334
G GTCH+FANK SFWLTT++ +Q+ F P ++TLK G+ +VSRC VC K
Sbjct: 975 GAKGTCHYFANKYSFWLTTVDPNQEFFYSPSQETLKGGQERSKVSRCQVCSK 1026
Score = 64.9 bits (151), Expect = 1e-09
Identities = 35/106 (33%), Positives = 50/106 (47%)
Frame = +2
Query: 11 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 190
HSQ +P CP G ++LW GYS +++ L PGSCL F IPF+ C+
Sbjct: 810 HSQDAQVPMCPQGMAKLWDGYS-LLYVEGQEKAHNQDLGQPGSCLPRFSTIPFLYCSPNE 868
Query: 191 GTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 328
+ N S+WL+T + E Q + +SRC+VC
Sbjct: 869 VCYYASRNDKSYWLSTTASIPMMPVAEAQ------IQAYISRCSVC 908
>UniRef50_UPI0000613E3C Cluster: Collagen alpha-2(IV) chain; n=2;
Bos taurus|Rep: Collagen alpha-2(IV) chain - Bos Taurus
Length = 227
Score = 154 bits (373), Expect = 1e-36
Identities = 67/112 (59%), Positives = 76/112 (67%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
IAVHSQ + IP CP GW LWIGYSF+MHT L SPGSCLEDFRA PFIECN
Sbjct: 115 IAVHSQDVSIPHCPAGWRSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECN 174
Query: 182 GEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIKN 337
G GTCH++ANK SFWLTTI + P TLK+G + +SRC VC+KN
Sbjct: 175 GARGTCHYYANKYSFWLTTIPEQSFQGTPSADTLKAGLIRTHISRCQVCMKN 226
Score = 62.9 bits (146), Expect = 5e-09
Identities = 37/107 (34%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Frame = +2
Query: 11 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 190
HSQT P CPVG ++LW GYS +++ L GSCL F +PF+ CN G
Sbjct: 10 HSQTDKEPMCPVGMNKLWSGYS-LLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCN-PG 67
Query: 191 GTCHHFA-NKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 328
C++ + N S+WL+T + E + +SRC+VC
Sbjct: 68 DVCYYASRNDKSYWLSTTAPLPMMPVAEED------IRPYISRCSVC 108
>UniRef50_P08120 Cluster: Collagen alpha-1(IV) chain precursor; n=5;
Diptera|Rep: Collagen alpha-1(IV) chain precursor -
Drosophila melanogaster (Fruit fly)
Length = 1775
Score = 154 bits (373), Expect = 1e-36
Identities = 65/114 (57%), Positives = 79/114 (69%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
IAVHSQT+++P CP GW LWIGYSF+MHT L SPGSCLEDFRA PFIECN
Sbjct: 1662 IAVHSQTIEVPDCPNGWEGLWIGYSFLMHTAVGNGGGGQALQSPGSCLEDFRATPFIECN 1721
Query: 182 GEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIKNTT 343
G GTCH + SFW+ +E SQ F P++QT+K+G VSRC VC+KN++
Sbjct: 1722 GAKGTCHFYETMTSFWMYNLESSQPFERPQQQTIKAGERQSHVSRCQVCMKNSS 1775
Score = 56.8 bits (131), Expect = 3e-07
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
I HSQ+ +P C G +ELW GYS +++ L GSC+ F +P + C
Sbjct: 1557 ITRHSQSETVPACSAGHTELWTGYS-LLYVDGNDYAHNQDL---GSCVPRFSTLPVLSC- 1611
Query: 182 GEGGTCHHFA-NKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 328
G+ C++ + N +FWLTT A+P +++ + + +SRC VC
Sbjct: 1612 GQNNVCNYASRNDKTFWLTT-----NAAIP-MMPVENIEIRQYISRCVVC 1655
>UniRef50_P08572 Cluster: Collagen alpha-2(IV) chain precursor
[Contains: Canstatin]; n=48; Tetrapoda|Rep: Collagen
alpha-2(IV) chain precursor [Contains: Canstatin] - Homo
sapiens (Human)
Length = 1712
Score = 153 bits (372), Expect = 2e-36
Identities = 67/112 (59%), Positives = 76/112 (67%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
IAVHSQ + IP CP GW LWIGYSF+MHT L SPGSCLEDFRA PFIECN
Sbjct: 1600 IAVHSQDVSIPHCPAGWRSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECN 1659
Query: 182 GEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIKN 337
G GTCH++ANK SFWLTTI + P TLK+G + +SRC VC+KN
Sbjct: 1660 GGRGTCHYYANKYSFWLTTIPEQSFQGSPSADTLKAGLIRTHISRCQVCMKN 1711
Score = 63.3 bits (147), Expect = 3e-09
Identities = 37/107 (34%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Frame = +2
Query: 11 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 190
HSQT P CPVG ++LW GYS +++ L GSCL F +PF+ CN G
Sbjct: 1495 HSQTDQEPMCPVGMNKLWSGYS-LLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCN-PG 1552
Query: 191 GTCHHFA-NKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 328
C++ + N S+WL+T + E + + +SRC+VC
Sbjct: 1553 DVCYYASRNDKSYWLSTTAPLPMMPVAEDE------IKPYISRCSVC 1593
>UniRef50_P29400 Cluster: Collagen alpha-5(IV) chain precursor; n=61;
Eumetazoa|Rep: Collagen alpha-5(IV) chain precursor -
Homo sapiens (Human)
Length = 1685
Score = 153 bits (370), Expect = 3e-36
Identities = 66/113 (58%), Positives = 82/113 (72%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
IAVHSQT+ IP CP GW LWIGYSF+MHT LASPGSCLE+FR+ PFIEC+
Sbjct: 1574 IAVHSQTIQIPHCPQGWDSLWIGYSFMMHTSAGAEGSGQALASPGSCLEEFRSAPFIECH 1633
Query: 182 GEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIKNT 340
G GTC+++AN SFWL T++ S F+ P+ +TLK+G L R+SRC VC+K T
Sbjct: 1634 GR-GTCNYYANSYSFWLATVDVSDMFSKPQSETLKAGDLRTRISRCQVCMKRT 1685
Score = 62.5 bits (145), Expect = 6e-09
Identities = 39/110 (35%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
I HSQT D P CP G +++ G+S +++ L + GSCL F +PF+ CN
Sbjct: 1464 ITRHSQTTDAPQCPQGTLQVYEGFS-LLYVQGNKRAHGQDLGTAGSCLRRFSTMPFMFCN 1522
Query: 182 GEGGTCHHFANKLSFWLTTIEDSQQFAMP-ERQTLKSGRLLERVSRCAVC 328
N S+WL+T E MP Q LK + +SRCAVC
Sbjct: 1523 INNVCNFASRNDYSYWLSTPE-----PMPMSMQPLKGQSIQPFISRCAVC 1567
>UniRef50_Q07265 Cluster: 3 alpha procollagen; n=4; Strongylocentrotus
purpuratus|Rep: 3 alpha procollagen - Strongylocentrotus
purpuratus (Purple sea urchin)
Length = 1752
Score = 144 bits (349), Expect = 1e-33
Identities = 62/112 (55%), Positives = 82/112 (73%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
+ VHSQT++IP CP W LWIGYSF+MHT L+SPGSCLEDFR+ PFIEC+
Sbjct: 1641 LTVHSQTVNIPDCPDRWGVLWIGYSFMMHTGPGGEGSGQMLSSPGSCLEDFRSSPFIECH 1700
Query: 182 GEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIKN 337
G+ G C+++A +FWL++I + QF MP+ +TLK+G L RVSRCAVC++N
Sbjct: 1701 GD-GKCNYYATTYTFWLSSITGNAQFTMPQSETLKAGSLRTRVSRCAVCLRN 1751
Score = 74.1 bits (174), Expect = 2e-12
Identities = 41/110 (37%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
I HSQT IP CP G +++W GYS ++ L PGSCL+ F +PF+ CN
Sbjct: 1531 ITRHSQTTSIPQCPQGTAKMWHGYS-LLFVQGNERGHGQDLGKPGSCLKRFSTMPFLFCN 1589
Query: 182 GEGGTCHHFA-NKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 328
CH + N S+WL+T E P ++ G+L +SRC VC
Sbjct: 1590 -INNVCHVASRNDYSYWLSTTEPMPMNMAP----IRGGQLQPFISRCVVC 1634
>UniRef50_P17139-2 Cluster: Isoform b of P17139 ; n=2; Caenorhabditis
elegans|Rep: Isoform b of P17139 - Caenorhabditis elegans
Length = 1502
Score = 142 bits (344), Expect = 5e-33
Identities = 62/112 (55%), Positives = 77/112 (68%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
IAVHSQ +P CP GWS +W GYSFVMHT L SPGSCLE+FRA+PFIEC+
Sbjct: 1391 IAVHSQDTSVPQCPQGWSGMWTGYSFVMHTAAGAEGTGQSLQSPGSCLEEFRAVPFIECH 1450
Query: 182 GEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIKN 337
G GTC+++A FW + ++ +QF P QTLK+G L +RVSRC VC+KN
Sbjct: 1451 GR-GTCNYYATNHGFWPSIVDQDKQFRKPMSQTLKAGGLKDRVSRCQVCLKN 1501
Score = 74.1 bits (174), Expect = 2e-12
Identities = 43/109 (39%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Frame = +2
Query: 5 AVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNG 184
A HSQT +P CP G S+LW GYS +++ L PGSCL F +PF+ CN
Sbjct: 1282 AKHSQTTAVPQCPPGASQLWEGYS-LLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFCN- 1339
Query: 185 EGGTCH-HFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 328
CH N SFWL+T E P T + +SRCAVC
Sbjct: 1340 MNSVCHVSSRNDYSFWLSTDEPMTPMMNPVTGT----AIRPYISRCAVC 1384
>UniRef50_P55787 Cluster: Collagen alpha-4(IV) chain; n=46;
Eumetazoa|Rep: Collagen alpha-4(IV) chain - Oryctolagus
cuniculus (Rabbit)
Length = 623
Score = 139 bits (336), Expect = 4e-32
Identities = 63/113 (55%), Positives = 74/113 (65%), Gaps = 2/113 (1%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
+AVHSQ IP CP W LWIGYSF+MHT L SPGSCLEDFRA PF+EC
Sbjct: 509 VAVHSQDQSIPPCPRAWRSLWIGYSFLMHTGAGDQGGGQALMSPGSCLEDFRAAPFLECQ 568
Query: 182 GEGGTCHHFANKLSFWLTTI-EDSQQFAMPERQTLKSGRL-LERVSRCAVCIK 334
G GTCH FAN+ SFWLTT+ D Q F+ P TLK + +++SRC VC+K
Sbjct: 569 GRQGTCHFFANEYSFWLTTVPPDLQVFSAPSPDTLKESQAQRQKISRCQVCVK 621
Score = 60.5 bits (140), Expect = 2e-08
Identities = 36/110 (32%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
+ +HSQT P CP+G LW GYS +++ L GSCL F +PF CN
Sbjct: 401 LVLHSQTDQEPACPMGMPRLWTGYS-LLYLEGQEKAHNQDLGLAGSCLPIFSTLPFAYCN 459
Query: 182 GEGGTCHHF-ANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 328
CH+ N S+WL + + E + + +SRCAVC
Sbjct: 460 IH-QVCHYAQRNDKSYWLASAGPLPMMPLSEEE------IRPYISRCAVC 502
>UniRef50_P53420 Cluster: Collagen alpha-4(IV) chain precursor; n=36;
Euteleostomi|Rep: Collagen alpha-4(IV) chain precursor -
Homo sapiens (Human)
Length = 1690
Score = 138 bits (334), Expect = 8e-32
Identities = 63/113 (55%), Positives = 74/113 (65%), Gaps = 2/113 (1%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
+AVHSQ IP CP W LWIGYSF+MHT L SPGSCLEDFRA PF+EC
Sbjct: 1576 VAVHSQDQSIPPCPQTWRSLWIGYSFLMHTGAGDQGGGQALMSPGSCLEDFRAAPFLECQ 1635
Query: 182 GEGGTCHHFANKLSFWLTTIEDSQQF-AMPERQTLKSGRL-LERVSRCAVCIK 334
G GTCH FANK SFWLTT++ QF + P TLK + +++SRC VC+K
Sbjct: 1636 GRQGTCHFFANKYSFWLTTVKADLQFSSAPAPDTLKESQAQRQKISRCQVCVK 1688
Score = 59.3 bits (137), Expect = 6e-08
Identities = 39/110 (35%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
+ +HSQT P CP+G LW GYS +++ L GSCL F +PF CN
Sbjct: 1468 LVLHSQTDQEPTCPLGMPRLWTGYS-LLYLEGQEKAHNQDLGLAGSCLPVFSTLPFAYCN 1526
Query: 182 GEGGTCHHF-ANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 328
CH+ N S+WL + MP L + VSRCAVC
Sbjct: 1527 IH-QVCHYAQRNDRSYWLASAAPLPM--MP----LSEEAIRPYVSRCAVC 1569
>UniRef50_Q26640 Cluster: Alpha2(IV)-like collagen; n=4;
Strongylocentrotus purpuratus|Rep: Alpha2(IV)-like
collagen - Strongylocentrotus purpuratus (Purple sea
urchin)
Length = 1747
Score = 137 bits (331), Expect = 2e-31
Identities = 62/111 (55%), Positives = 77/111 (69%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
+A+HSQ+ +IP CP GW LW GYSF M+T L S GSCLE+FRA PFIECN
Sbjct: 1637 LAIHSQSQEIPQCPGGWRSLWTGYSFTMYTAASEGGGQG-LESVGSCLENFRATPFIECN 1695
Query: 182 GEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIK 334
G G CH F+N+ SFWLT I++ QFA+P ++T+KSG+L VSRC VC K
Sbjct: 1696 GRGN-CHFFSNEYSFWLTVIDEEDQFAIPRKRTIKSGQLQSVVSRCRVCQK 1745
Score = 66.1 bits (154), Expect = 5e-10
Identities = 39/109 (35%), Positives = 54/109 (49%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
I HSQ+ ++P CP G ELW G+S V+ + L GSCL+ F +PF+ CN
Sbjct: 1529 ITRHSQSRNVPSCPAGTVELWRGFS-VLFSMGNGHAHHQDLGDAGSCLQRFSTMPFLFCN 1587
Query: 182 GEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 328
+ N S+WLTT E MP L + ++ +SRC VC
Sbjct: 1588 FNNVCNYASRNDRSYWLTTNEPLPM--MP----LMNQQIDPYISRCTVC 1630
>UniRef50_UPI00015B49AB Cluster: PREDICTED: similar to alpha-5 type IV
collagen; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to alpha-5 type IV collagen - Nasonia vitripennis
Length = 1702
Score = 136 bits (329), Expect = 3e-31
Identities = 60/111 (54%), Positives = 79/111 (71%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
I +HSQ++ IP CP GW ELW GYSF+MH L+SPGSCLE+FRA PFIEC
Sbjct: 1487 IVMHSQSMAIPECPGGWEELWAGYSFLMHRDAGAAGGGQPLSSPGSCLEEFRARPFIECR 1546
Query: 182 GEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIK 334
G+ GTC+ F+ +S+W+ TI+D +QF P++QTLK+ RVSRC+VCI+
Sbjct: 1547 GQ-GTCNFFSTAVSYWMATIKDYEQFRKPQQQTLKTDH-TSRVSRCSVCIR 1595
Score = 60.9 bits (141), Expect = 2e-08
Identities = 35/108 (32%), Positives = 52/108 (48%)
Frame = +2
Query: 5 AVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNG 184
A HSQ+ IP CP ++W G+S ++H L +PGSCL+ F +PF CN
Sbjct: 1378 ARHSQSAMIPVCPRNTVKMWDGFS-LLHVMGNSYAHAQDLGTPGSCLKKFSVMPFNVCNL 1436
Query: 185 EGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 328
+ N S+WL++ E P + S + +SRC+VC
Sbjct: 1437 NNVCDYANRNDYSYWLSSNEQMPMSMTP----IPSREVGAYISRCSVC 1480
>UniRef50_Q4SZ69 Cluster: Chromosome undetermined SCAF11805, whole
genome shotgun sequence; n=2; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF11805,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 471
Score = 105 bits (251), Expect(2) = 4e-31
Identities = 46/85 (54%), Positives = 58/85 (68%)
Frame = +2
Query: 86 HTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAM 265
HT LASPGSCLE+FR+ PFIEC+G G TC+++ N SFWL T+E S+ F
Sbjct: 388 HTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRG-TCNYYGNSYSFWLATVEPSEMFRK 446
Query: 266 PERQTLKSGRLLERVSRCAVCIKNT 340
P+ +TLK+G L RVSRC VC+K T
Sbjct: 447 PQSETLKAGNLQTRVSRCVVCMKRT 471
Score = 58.8 bits (136), Expect = 7e-08
Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
I HSQ D+P CP G + ++ GYS +++ L + GSCL F +PF+ CN
Sbjct: 210 ITRHSQAQDVPYCPDGTNLIYDGYS-LLYVQGNERAHGQDLGTAGSCLRRFSTMPFMFCN 268
Query: 182 GEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLER-VSRCAVC 328
N S+WL+T E MP +G ++ +SRCAVC
Sbjct: 269 INNVCNFASRNDYSYWLSTPE-----PMPMSMAPITGESIKPFISRCAVC 313
Score = 52.0 bits (119), Expect(2) = 4e-31
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVM 85
IAVHSQT+ IP CP W LWIGYSF+M
Sbjct: 320 IAVHSQTIQIPTCPANWEALWIGYSFMM 347
>UniRef50_Q28084 Cluster: Collagen alpha-3(IV) chain; n=13; cellular
organisms|Rep: Collagen alpha-3(IV) chain - Bos taurus
(Bovine)
Length = 471
Score = 134 bits (324), Expect = 1e-30
Identities = 59/111 (53%), Positives = 75/111 (67%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
IAVHSQT DIP CP GW LW G+SF+M T LASPGSCLE+FRA PFIEC+
Sbjct: 359 IAVHSQTTDIPPCPAGWISLWKGFSFIMFTSAGSEGAGQALASPGSCLEEFRASPFIECH 418
Query: 182 GEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIK 334
G GTC++++N SFWL +++ + F P T+K+G L +SRC VC+K
Sbjct: 419 GR-GTCNYYSNSYSFWLASLDPKRMFRKPIPSTVKAGELENIISRCQVCMK 468
Score = 57.6 bits (133), Expect = 2e-07
Identities = 37/107 (34%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Frame = +2
Query: 11 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 190
HSQT IP CP G L+ G+S ++ L + GSCL+ F +PF+ CN
Sbjct: 252 HSQTTAIPSCPEGTEPLYSGFS-LLFVQGNEQAHGQDLGTLGSCLQRFTTMPFLFCNIND 310
Query: 191 GTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLE-RVSRCAVC 328
N S+WL+T +P +GR LE +SRC VC
Sbjct: 311 VCNFASRNDYSYWLST-----PAMIPMDMAPITGRALEPYISRCTVC 352
>UniRef50_Q01955 Cluster: Collagen alpha-3(IV) chain precursor
(Goodpasture antigen) [Contains: Tumstatin]; n=61;
Eumetazoa|Rep: Collagen alpha-3(IV) chain precursor
(Goodpasture antigen) [Contains: Tumstatin] - Homo
sapiens (Human)
Length = 1670
Score = 132 bits (318), Expect = 7e-30
Identities = 58/111 (52%), Positives = 75/111 (67%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
IAVHSQT DIP CP GW LW G+SF+M T LASPGSCLE+FRA PF+EC+
Sbjct: 1558 IAVHSQTTDIPPCPHGWISLWKGFSFIMFTSAGSEGTGQALASPGSCLEEFRASPFLECH 1617
Query: 182 GEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIK 334
G GTC++++N SFWL ++ + F P T+K+G L + +SRC VC+K
Sbjct: 1618 GR-GTCNYYSNSYSFWLASLNPERMFRKPIPSTVKAGELEKIISRCQVCMK 1667
Score = 61.7 bits (143), Expect = 1e-08
Identities = 39/107 (36%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Frame = +2
Query: 11 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 190
HSQT IP CP G L+ G+SF + L + GSCL+ F +PF+ CN
Sbjct: 1451 HSQTTAIPSCPEGTVPLYSGFSF-LFVQGNQRAHGQDLGTLGSCLQRFTTMPFLFCNVND 1509
Query: 191 GTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLE-RVSRCAVC 328
N S+WL+T MP +GR LE +SRC VC
Sbjct: 1510 VCNFASRNDYSYWLST-----PALMPMNMAPITGRALEPYISRCTVC 1551
>UniRef50_Q58FS7 Cluster: Type IV collagen alpha 3 chain; n=2; Danio
rerio|Rep: Type IV collagen alpha 3 chain - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 244
Score = 130 bits (314), Expect = 2e-29
Identities = 59/111 (53%), Positives = 74/111 (66%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
IA+HSQT++IP CPVGW LW GYSFVM T L SPGSCLE FR IPFIEC+
Sbjct: 130 IAIHSQTINIPQCPVGWLSLWEGYSFVMQTGVGAEGSGQPLVSPGSCLEQFRKIPFIECH 189
Query: 182 GEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIK 334
G GTC+ + + S+WL +++ + F+MP RQT K E +SRC VC+K
Sbjct: 190 GR-GTCNFYPDSYSYWLASLDHTNMFSMPNRQTAKQ---KEIISRCQVCMK 236
Score = 65.3 bits (152), Expect = 9e-10
Identities = 41/108 (37%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Frame = +2
Query: 11 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 190
HSQT IP CP G L+ GYS ++ L + GSCL F +PF+ CN +
Sbjct: 23 HSQTTVIPECPAGSKRLYTGYS-LLFINGNNRGHGQDLGTLGSCLPMFNTMPFMVCNRD- 80
Query: 191 GTCHHFA-NKLSFWLTTIEDSQQFAMPERQTLKSGRLLE-RVSRCAVC 328
TC + + N S+WL+T D+ +P++Q + SG +L+ +SRC+VC
Sbjct: 81 ETCRYASRNDYSYWLST--DTPM--LPDQQ-MMSGEILKWYISRCSVC 123
>UniRef50_Q4S0I4 Cluster: Chromosome 2 SCAF14781, whole genome shotgun
sequence; n=5; Euteleostomi|Rep: Chromosome 2 SCAF14781,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 1468
Score = 126 bits (305), Expect = 2e-28
Identities = 53/81 (65%), Positives = 61/81 (75%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
IAVHSQ + IP CPVGW LWIGYSF+MHT L+SPGSCLEDFR PFIECN
Sbjct: 1387 IAVHSQDITIPQCPVGWRSLWIGYSFLMHTAAGNEGGGQSLSSPGSCLEDFRTTPFIECN 1446
Query: 182 GEGGTCHHFANKLSFWLTTIE 244
G GTCH+FANK SFWL++++
Sbjct: 1447 GAKGTCHYFANKHSFWLSSVD 1467
Score = 65.7 bits (153), Expect = 7e-10
Identities = 39/107 (36%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Frame = +2
Query: 11 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 190
HSQT IP CPVG ++LW GYS +++ L GSCL F +PF+ CN G
Sbjct: 1282 HSQTEQIPMCPVGMAKLWSGYS-LLYMEGQEKAHNQDLGLAGSCLPRFSTMPFLYCN-PG 1339
Query: 191 GTCHHFA-NKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 328
C++ + N S+WL+T MP ++ + +SRC+VC
Sbjct: 1340 DICYYASRNDKSYWLSTTAPLPM--MP----VEDVEIKPYISRCSVC 1380
>UniRef50_Q7PVR6 Cluster: ENSANGP00000016652; n=3;
Endopterygota|Rep: ENSANGP00000016652 - Anopheles
gambiae str. PEST
Length = 461
Score = 124 bits (299), Expect = 1e-27
Identities = 55/109 (50%), Positives = 72/109 (66%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
+A+HSQ++ IP CP GW ELW+GYS+ MHT SPGSC+E+FR P IEC+
Sbjct: 297 MALHSQSMSIPDCPEGWEELWLGYSYAMHTSDNSGGFGQDFVSPGSCMEEFRPQPVIECH 356
Query: 182 GEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 328
G GTC+ + SFWLT I+D+ QF P+ QTLK+ + +VSRC VC
Sbjct: 357 GH-GTCNFYDGISSFWLTIIDDAMQFNRPQPQTLKAHQ-TSKVSRCIVC 403
Score = 61.3 bits (142), Expect = 1e-08
Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Frame = +2
Query: 5 AVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNG 184
A HSQ + IP CP+ +LW GYS V + L + GSCL F +PF+ C+
Sbjct: 188 ARHSQKVTIPECPINTYKLWDGYSLV-NVIASSRSVGQDLGAAGSCLRRFSTMPFMFCD- 245
Query: 185 EGGTCHHFANK-LSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIKNT 340
C++ +N + WL T E P + + ++ +SRC+VC NT
Sbjct: 246 INNVCNYASNNDDTIWLATPEPMPMSMAP----IPADQVERYISRCSVCESNT 294
>UniRef50_Q9VMV5 Cluster: CG16858-PA; n=6; Schizophora|Rep: CG16858-PA
- Drosophila melanogaster (Fruit fly)
Length = 1940
Score = 123 bits (297), Expect = 2e-27
Identities = 55/109 (50%), Positives = 70/109 (64%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
IA+HSQ++ IP CP GW E+W GYS+ M T L SPGSCLE+FRA P IEC+
Sbjct: 1628 IALHSQSMSIPDCPGGWEEMWTGYSYFMSTLDNVGGVGQNLVSPGSCLEEFRAQPVIECH 1687
Query: 182 GEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 328
G G C+++ SFWLT IE+ QF P +QTLK+ ++SRC VC
Sbjct: 1688 GH-GRCNYYDALASFWLTVIEEQDQFVQPRQQTLKAD-FTSKISRCTVC 1734
Score = 58.0 bits (134), Expect = 1e-07
Identities = 41/115 (35%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Frame = +2
Query: 5 AVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNG 184
A HSQ++ +P CP + LW GYS + L GSC+ F +P++ C+
Sbjct: 1519 ARHSQSVHVPQCPANTNLLWEGYS-LSGNVAASRAVGQDLGQSGSCMMRFTTMPYMLCD- 1576
Query: 185 EGGTCHHFA--NKLSFWLTTIEDSQQFAMPERQTLKSGR-LLERVSRCAVCIKNT 340
C HFA N S WL+T E MP T GR L++ +SRC VC T
Sbjct: 1577 ITNVC-HFAQNNDDSLWLSTAE-----PMPMTMTPIQGRDLMKYISRCVVCETTT 1625
>UniRef50_UPI000065E566 Cluster: Homolog of Homo sapiens "Splice
Isoform 1 of Collagen alpha 3; n=1; Takifugu
rubripes|Rep: Homolog of Homo sapiens "Splice Isoform 1
of Collagen alpha 3 - Takifugu rubripes
Length = 1258
Score = 120 bits (289), Expect = 2e-26
Identities = 54/110 (49%), Positives = 67/110 (60%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
IAVHSQT IP CP W LW GYSFVM T L SPGSCLE FR +PFIEC+
Sbjct: 1150 IAVHSQTTQIPDCPQDWVSLWSGYSFVMQTGIGADGSSQPLISPGSCLETFRKVPFIECH 1209
Query: 182 GEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCI 331
G GTC+++ + SFW+ +++ F P QT+K L +SRC VC+
Sbjct: 1210 GR-GTCNYYPDSYSFWMASLDPKNMFGKPIPQTVKEPSLQSILSRCRVCM 1258
Score = 75.4 bits (177), Expect = 8e-13
Identities = 45/111 (40%), Positives = 61/111 (54%), Gaps = 2/111 (1%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFV-MHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 178
IA HSQ++ IP CP G S L+ GYSF+ MH L +PGSCL F +PF+ C
Sbjct: 1040 IARHSQSIHIPVCPCGTSLLFSGYSFLFMHANDRVHGQD--LGTPGSCLPHFSTMPFLVC 1097
Query: 179 NGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLL-ERVSRCAVC 328
+ E + N S+WL+T + A+PE +G +L +SRCAVC
Sbjct: 1098 DTESNCRYASRNDYSYWLSTGK-----ALPENMVSITGDMLASYISRCAVC 1143
>UniRef50_UPI00006608B5 Cluster: Homolog of Homo sapiens "Tumstatin;
n=1; Takifugu rubripes|Rep: Homolog of Homo sapiens
"Tumstatin - Takifugu rubripes
Length = 1374
Score = 119 bits (286), Expect = 5e-26
Identities = 53/111 (47%), Positives = 68/111 (61%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
IA+HSQT +P CP+GW LW+GYSFVM T LASPGSCLE FR IPFIEC+
Sbjct: 1264 IAIHSQTSVVPDCPLGWLPLWVGYSFVMETGVGAEGSGQPLASPGSCLEQFRKIPFIECH 1323
Query: 182 GEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIK 334
G GTC+++ + S+WL + F+ P+ T +SRC VC+K
Sbjct: 1324 GR-GTCNYYTDSYSYWLAALSPHDMFSKPKPHTDTGEFPGSLISRCRVCMK 1373
Score = 66.9 bits (156), Expect = 3e-10
Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Frame = +2
Query: 11 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 190
HSQ L IP CPVG +E++ GYS ++ L + GSCL F +PF+ CN +
Sbjct: 1157 HSQELSIPECPVGSTEVYSGYS-LLFINGNNRAHGQDLGTLGSCLPRFTTMPFLFCNTD- 1214
Query: 191 GTCHHFA-NKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIKNT 340
TC + + N S+WL+T Q + + L +SRC+VC T
Sbjct: 1215 STCRYASRNDYSYWLST----NQVVLSNMPLISGDLLRSYISRCSVCETRT 1261
>UniRef50_UPI000065E567 Cluster: Homolog of Brachydanio rerio
"Collagen, type I, alpha 3.; n=1; Takifugu rubripes|Rep:
Homolog of Brachydanio rerio "Collagen, type I, alpha 3.
- Takifugu rubripes
Length = 1426
Score = 117 bits (282), Expect = 2e-25
Identities = 51/112 (45%), Positives = 67/112 (59%), Gaps = 1/112 (0%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
+ HSQ P CP GW LW GYSF+MHT L S GSCL++F+ P IEC
Sbjct: 1315 VVFHSQEHTAPACPQGWRSLWTGYSFLMHTGAGDEGSGQALTSSGSCLKNFQTHPIIECQ 1374
Query: 182 GEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKS-GRLLERVSRCAVCIK 334
G G+CH+F+N SFWLTTI ++QF P T+K+ R + S+C VC++
Sbjct: 1375 GPQGSCHYFSNLYSFWLTTISPTEQFKAPRPGTIKAPDRQRSKTSQCHVCLR 1426
Score = 61.7 bits (143), Expect = 1e-08
Identities = 37/110 (33%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
+ +HSQ++ +P CP G S LW+GYS + + L GSCL F +PF CN
Sbjct: 1208 LVIHSQSVQVPKCPDGSSLLWVGYS-LAYLKGQKNAHAQDLGQAGSCLRVFSTMPFSYCN 1266
Query: 182 GEGGTCHHFA-NKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 328
CH + N S+WL+T MP + + +SRC VC
Sbjct: 1267 --KAACHFSSRNDKSYWLSTAAPIPM--MP----VFGQEISSHISRCVVC 1308
>UniRef50_Q9GQB1 Cluster: Type IV collagen alpha 1 chain precursor;
n=1; Hydra vulgaris|Rep: Type IV collagen alpha 1 chain
precursor - Hydra attenuata (Hydra) (Hydra vulgaris)
Length = 1723
Score = 116 bits (278), Expect = 5e-25
Identities = 55/112 (49%), Positives = 73/112 (65%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
+AVHSQ+ P CP GW LW G+SF+M+ L+S GSCLEDFR P+IEC+
Sbjct: 1612 LAVHSQSELDPKCPDGWENLWTGFSFLMYNSAGAQGSGQLLSSSGSCLEDFRVNPYIECH 1671
Query: 182 GEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIKN 337
G GTC ++ LSFWL+TI +S F +P+ + L+ L RVSRCAVC+K+
Sbjct: 1672 GR-GTCWYYGPTLSFWLSTIGESNMFQVPKFEILER-NLKARVSRCAVCMKS 1721
Score = 69.7 bits (163), Expect = 4e-11
Identities = 36/106 (33%), Positives = 50/106 (47%)
Frame = +2
Query: 11 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 190
HSQ++ +P CP G +W GYSF ++ L PGSCL+ F +PF+ C+ +
Sbjct: 1507 HSQSIKVPSCPAGMQTMWEGYSF-LYAQGNERAFGQDLGQPGSCLKRFSTMPFLFCDIQN 1565
Query: 191 GTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 328
N SFWL+T E P+ L +SRC VC
Sbjct: 1566 KCVVASRNDYSFWLSTAE------KPKEAPSSGADLENYISRCIVC 1605
>UniRef50_UPI00015A592A Cluster: Type IV collagen alpha 4 chain; n=3;
Danio rerio|Rep: Type IV collagen alpha 4 chain - Danio
rerio
Length = 1639
Score = 99.1 bits (236), Expect = 6e-20
Identities = 47/113 (41%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
IA+HSQ P CP W LW G+SF+M+T L S GSCL+DFR+ PF+EC
Sbjct: 1527 IAIHSQDRLDPVCPPKWRSLWTGFSFMMYTGSGDEGGGQSLTSTGSCLQDFRSQPFVECQ 1586
Query: 182 GEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGR-LLERVSRCAVCIKN 337
G GTC +FA+ SFW+ TI+ + P + R + SRC++C+ N
Sbjct: 1587 GPRGTCSYFASIYSFWM-TIDMEHNDSSPHGPVITEERQQRDSTSRCSICMMN 1638
Score = 63.7 bits (148), Expect = 3e-09
Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
+ +HSQ+ +P CP G ++LW GYS +++ L GSCL F +PF CN
Sbjct: 1420 LVMHSQSRYVPTCPAGLTQLWNGYS-LLYLEGQERAHTQDLGQAGSCLPVFSTMPFSCCN 1478
Query: 182 GEGGTCHHFA-NKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 328
+ TC + + N S+WL+T +P + LK + E +SRC VC
Sbjct: 1479 MD--TCDYASRNDKSYWLST-----NAPIPNK-PLKGQDIEEHISRCVVC 1520
>UniRef50_Q4TZW9 Cluster: Type IV collagen alpha 4 chain; n=3; Danio
rerio|Rep: Type IV collagen alpha 4 chain - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 240
Score = 99.1 bits (236), Expect = 6e-20
Identities = 47/113 (41%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
IA+HSQ P CP W LW G+SF+M+T L S GSCL+DFR+ PF+EC
Sbjct: 125 IAIHSQDRLDPVCPPKWRNLWTGFSFMMYTGSGDEGGGQSLTSTGSCLQDFRSQPFVECQ 184
Query: 182 GEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGR-LLERVSRCAVCIKN 337
G GTC +FA+ SFW+ TI+ + P + R + SRC++C+ N
Sbjct: 185 GPRGTCSYFASIYSFWM-TIDMEHNDSSPHGPVITEERQQRDSTSRCSICMMN 236
Score = 63.7 bits (148), Expect = 3e-09
Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
+ +HSQ+ +P CP G ++LW GYS +++ L GSCL F +PF CN
Sbjct: 18 LVMHSQSRYVPTCPAGLTQLWNGYS-LLYLEGQERAHTQDLGQAGSCLPVFSTMPFSCCN 76
Query: 182 GEGGTCHHFA-NKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 328
+ TC + + N S+WL+T +P + LK + E +SRC VC
Sbjct: 77 MD--TCDYASRNDKSYWLST-----NAPIPNK-PLKGQDIEEHISRCVVC 118
>UniRef50_O09238 Cluster: Collagen type IV; n=2; Pseudocorticium
jarrei|Rep: Collagen type IV - Pseudocorticium jarrei
Length = 854
Score = 89.0 bits (211), Expect = 6e-17
Identities = 43/109 (39%), Positives = 58/109 (53%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
IAVHSQ ++P C GW LW G+SF+ T L SPGSCL+ FR+ PFI C
Sbjct: 740 IAVHSQDSNVPDCFPGWVTLWTGFSFLQQTAAQAEGTGQGLESPGSCLQHFRSTPFIGCG 799
Query: 182 GEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 328
G G C + + S+W+ ++ F E T + +R+SRC VC
Sbjct: 800 GR-GQCSYDSVSGSYWMIVLDALNPFQDTEPGTYPVSDIEKRLSRCRVC 847
Score = 66.1 bits (154), Expect = 5e-10
Identities = 38/114 (33%), Positives = 58/114 (50%), Gaps = 1/114 (0%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
+ VHSQT +IP CP ++ LW+GYS + T L PGSC+ F +P + CN
Sbjct: 632 LVVHSQTTNIPQCPNDYTRLWVGYSLLQLT-GNGLGVGQDLGDPGSCMPSFHPMPVVRCN 690
Query: 182 GEGGTCHHFANK-LSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIKNT 340
C K S+WL+T ++ + +P + + E +SRC+VC N+
Sbjct: 691 -PMQRCEFARRKDESYWLST--NATRPPIP----VSGSDIEEHISRCSVCESNS 737
>UniRef50_Q5C3P1 Cluster: SJCHGC06113 protein; n=2;
Platyhelminthes|Rep: SJCHGC06113 protein - Schistosoma
japonicum (Blood fluke)
Length = 587
Score = 87.8 bits (208), Expect = 1e-16
Identities = 44/113 (38%), Positives = 63/113 (55%), Gaps = 3/113 (2%)
Frame = +2
Query: 5 AVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNG 184
A HSQ + CP W+ELW G S ++HT L+SPGSC+E FR P IECN
Sbjct: 473 AFHSQGETLQPCPSTWTELWTGVSLILHTSGAHGGGQQ-LSSPGSCMEHFRYSPVIECNN 531
Query: 185 EGGTCHHFANKLSFWLTTIEDS-QQFAMPERQTLKS--GRLLERVSRCAVCIK 334
G CH++++ ++L + + QF P +K+ G +L VS+C VC+K
Sbjct: 532 NVGMCHYWSDAKVYYLRALNPNITQFEKPVGFVMKAAEGPVLNNVSKCRVCMK 584
Score = 53.2 bits (122), Expect = 4e-06
Identities = 28/97 (28%), Positives = 47/97 (48%)
Frame = +2
Query: 38 CPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEGGTCHHFANK 217
CP G ++L+ GYS+VM L +P SCL F ++P +C + ++
Sbjct: 376 CPGGTNKLFTGYSYVMG-GGVDDLVSMDLGTPSSCLSKFSSLPMTQCERDTTCQSSMRHE 434
Query: 218 LSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 328
S+WL T+ + +P QT ++++RC VC
Sbjct: 435 RSYWLATLVPRSEQPIPVNQT------ADQIARCVVC 465
>UniRef50_UPI0000DA44CD Cluster: PREDICTED: similar to procollagen,
type IV, alpha 6; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to procollagen, type IV, alpha 6 - Rattus
norvegicus
Length = 1405
Score = 68.1 bits (159), Expect = 1e-10
Identities = 39/107 (36%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Frame = +2
Query: 11 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 190
HSQ+ +P CP+G S+LW+GYS ++ L GSCL F +PFI CN
Sbjct: 1254 HSQSEHVPPCPIGMSQLWVGYS-LLFVEGQEKAHNQDLGFAGSCLPRFSTMPFIYCN-IN 1311
Query: 191 GTCHHF-ANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 328
CH+ N S+WL+T MP +T ++ + +SRC+VC
Sbjct: 1312 EVCHYARRNDKSYWLSTTAPIPM--MPVGET----QIPQYISRCSVC 1352
>UniRef50_UPI0000DBF028 Cluster: UPI0000DBF028 related cluster; n=9;
Rattus norvegicus|Rep: UPI0000DBF028 UniRef100 entry -
Rattus norvegicus
Length = 1549
Score = 68.1 bits (159), Expect = 1e-10
Identities = 39/107 (36%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Frame = +2
Query: 11 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 190
HSQ+ +P CP+G S+LW+GYS ++ L GSCL F +PFI CN
Sbjct: 1418 HSQSEHVPPCPIGMSQLWVGYS-LLFVEGQEKAHNQDLGFAGSCLPRFSTMPFIYCN-IN 1475
Query: 191 GTCHHF-ANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 328
CH+ N S+WL+T MP +T ++ + +SRC+VC
Sbjct: 1476 EVCHYARRNDKSYWLSTTAPIPM--MPVGET----QIPQYISRCSVC 1516
Score = 46.4 bits (105), Expect = 4e-04
Identities = 19/28 (67%), Positives = 22/28 (78%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVM 85
IAVHSQ +P CP+GW LWIGYSF+M
Sbjct: 1523 IAVHSQDT-VPQCPLGWHSLWIGYSFLM 1549
>UniRef50_Q5BYE6 Cluster: SJCHGC08138 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08138 protein - Schistosoma
japonicum (Blood fluke)
Length = 206
Score = 58.8 bits (136), Expect = 7e-08
Identities = 38/113 (33%), Positives = 51/113 (45%), Gaps = 2/113 (1%)
Frame = +2
Query: 8 VHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGE 187
VHSQ P CP+ + ++ GYS V L +PGSCL F +PF C +
Sbjct: 98 VHSQDSQPPSCPIYTTPVYTGYSLVT-LQGDDDSTTMDLGTPGSCLRKFSIMPFANCFAK 156
Query: 188 -GGTCH-HFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIKNT 340
G C + N S+WL+T+E Q P R + +SRC VC T
Sbjct: 157 VNGNCQINMRNGRSYWLSTLE--QYMLSPARVE----NIKPYISRCIVCQSRT 203
>UniRef50_Q4SB07 Cluster: Chromosome undetermined SCAF14677, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14677,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 856
Score = 54.0 bits (124), Expect = 2e-06
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +2
Query: 11 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 190
HSQ L IP CP G ++++ GYS ++ L + GSCL F +PF+ CN +
Sbjct: 741 HSQELYIPECPAGSTQVYSGYS-LLFINGNNRAHGQDLGTLGSCLPRFTTMPFLFCNTD- 798
Query: 191 GTCHHFA-NKLSFWLTT 238
TC + + N S+WL+T
Sbjct: 799 RTCRYASRNDYSYWLST 815
>UniRef50_A7T795 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 331
Score = 47.6 bits (108), Expect = 2e-04
Identities = 22/60 (36%), Positives = 31/60 (51%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
I HSQT P CP + +LW GYS +++ L GSCL+ F +P++ CN
Sbjct: 259 IVKHSQTTTPPECPPTYDKLWDGYS-LLYVQGHDVSHGQDLGQAGSCLKRFTTMPYLYCN 317
>UniRef50_A7T3G2 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 590
Score = 47.6 bits (108), Expect = 2e-04
Identities = 22/60 (36%), Positives = 31/60 (51%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
I HSQT P CP + +LW GYS +++ L GSCL+ F +P++ CN
Sbjct: 478 IVKHSQTTTPPECPPTYDKLWDGYS-LLYVQGHDVSHGQDLGQAGSCLKRFTTMPYLYCN 536
>UniRef50_A1ZSZ5 Cluster: Putative uncharacterized protein; n=1;
Microscilla marina ATCC 23134|Rep: Putative
uncharacterized protein - Microscilla marina ATCC 23134
Length = 256
Score = 33.9 bits (74), Expect = 2.4
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = -3
Query: 321 AHLDTRSRRRPDLSVCRSGIANCWL--SSMVVSQKLSLFAK*WQVPPSPLHSI 169
A L + RRR L R+G+ WL + +V+Q L L W+ PP+PLHSI
Sbjct: 26 ALLTKKPRRRRQL--LRTGVFLLWLFTNPFIVNQALLL----WEAPPTPLHSI 72
>UniRef50_Q24BC9 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 474
Score = 33.1 bits (72), Expect = 4.3
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Frame = +3
Query: 195 LAITLQINSVSG*PPSKTANSLL-CQSDRHLSLDVS*NVYPDVQFVSKTPHSANKLKVLN 371
L I+L +N ++ S + L C HLSL + N D+ VS+ S ++ + L+
Sbjct: 112 LVISLNMNKITSIGSSNLISQLTKCNKLSHLSLFFNNNQIGDLG-VSQFSSSLSQFQKLS 170
Query: 372 NQMLI*PLMQYLFKIQKK-LIDHICNTLFKFLVIN-YSQETTL 494
+ Q+ +IQ+ L+ IC+ +FK+L+ N YS T L
Sbjct: 171 KLLFGLKEHQHQVQIQQNALLFQICDFIFKYLLQNLYSINTKL 213
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 545,921,022
Number of Sequences: 1657284
Number of extensions: 10132899
Number of successful extensions: 19857
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 19282
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19791
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34989170748
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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