Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_E24
(542 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collag... 154 9e-38
M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type I... 154 9e-38
J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV pro-co... 154 9e-38
AE014134-846|AAN10520.1| 1779|Drosophila melanogaster CG4145-PC,... 154 9e-38
AE014134-845|AAN10519.1| 1779|Drosophila melanogaster CG4145-PB,... 154 9e-38
AE014134-844|AAF52204.1| 1779|Drosophila melanogaster CG4145-PA,... 154 9e-38
M28334-1|AAA28422.1| 421|Drosophila melanogaster type VI-relate... 153 1e-37
U65431-1|AAB64082.1| 1761|Drosophila melanogaster collagen type ... 123 1e-28
AE014134-843|AAF52203.1| 1940|Drosophila melanogaster CG16858-PA... 123 1e-28
DQ780943-1|ABH07113.1| 910|Drosophila melanogaster prominin pro... 29 3.1
BT029279-1|ABK30916.1| 1066|Drosophila melanogaster IP13255p pro... 29 3.1
AE013599-3867|AAM68313.1| 670|Drosophila melanogaster CG30164-P... 29 3.1
AY095526-1|AAM12257.1| 435|Drosophila melanogaster RE15519p pro... 28 9.5
AE014298-746|AAF46037.2| 435|Drosophila melanogaster CG16752-PA... 28 9.5
>M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collagen
protein.
Length = 1775
Score = 154 bits (373), Expect = 9e-38
Identities = 65/114 (57%), Positives = 79/114 (69%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
IAVHSQT+++P CP GW LWIGYSF+MHT L SPGSCLEDFRA PFIECN
Sbjct: 1662 IAVHSQTIEVPDCPNGWEGLWIGYSFLMHTAVGNGGGGQALQSPGSCLEDFRATPFIECN 1721
Query: 182 GEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIKNTT 343
G GTCH + SFW+ +E SQ F P++QT+K+G VSRC VC+KN++
Sbjct: 1722 GAKGTCHFYETMTSFWMYNLESSQPFERPQQQTIKAGERQSHVSRCQVCMKNSS 1775
Score = 56.8 bits (131), Expect = 2e-08
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
I HSQ+ +P C G +ELW GYS +++ L GSC+ F +P + C
Sbjct: 1557 ITRHSQSETVPACSAGHTELWTGYS-LLYVDGNDYAHNQDL---GSCVPRFSTLPVLSC- 1611
Query: 182 GEGGTCHHFA-NKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 328
G+ C++ + N +FWLTT A+P +++ + + +SRC VC
Sbjct: 1612 GQNNVCNYASRNDKTFWLTT-----NAAIP-MMPVENIEIRQYISRCVVC 1655
>M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type IV
collagen protein.
Length = 1775
Score = 154 bits (373), Expect = 9e-38
Identities = 65/114 (57%), Positives = 79/114 (69%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
IAVHSQT+++P CP GW LWIGYSF+MHT L SPGSCLEDFRA PFIECN
Sbjct: 1662 IAVHSQTIEVPDCPNGWEGLWIGYSFLMHTAVGNGGGGQALQSPGSCLEDFRATPFIECN 1721
Query: 182 GEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIKNTT 343
G GTCH + SFW+ +E SQ F P++QT+K+G VSRC VC+KN++
Sbjct: 1722 GAKGTCHFYETMTSFWMYNLESSQPFERPQQQTIKAGERQSHVSRCQVCMKNSS 1775
Score = 56.8 bits (131), Expect = 2e-08
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
I HSQ+ +P C G +ELW GYS +++ L GSC+ F +P + C
Sbjct: 1557 ITRHSQSETVPACSAGHTELWTGYS-LLYVDGNDYAHNQDL---GSCVPRFSTLPVLSC- 1611
Query: 182 GEGGTCHHFA-NKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 328
G+ C++ + N +FWLTT A+P +++ + + +SRC VC
Sbjct: 1612 GQNNVCNYASRNDKTFWLTT-----NAAIP-MMPVENIEIRQYISRCVVC 1655
>J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV
pro-collagen protein.
Length = 1775
Score = 154 bits (373), Expect = 9e-38
Identities = 65/114 (57%), Positives = 79/114 (69%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
IAVHSQT+++P CP GW LWIGYSF+MHT L SPGSCLEDFRA PFIECN
Sbjct: 1662 IAVHSQTIEVPDCPNGWEGLWIGYSFLMHTAVGNGGGGQALQSPGSCLEDFRATPFIECN 1721
Query: 182 GEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIKNTT 343
G GTCH + SFW+ +E SQ F P++QT+K+G VSRC VC+KN++
Sbjct: 1722 GAKGTCHFYETMTSFWMYNLESSQPFERPQQQTIKAGERQSHVSRCQVCMKNSS 1775
Score = 56.8 bits (131), Expect = 2e-08
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
I HSQ+ +P C G +ELW GYS +++ L GSC+ F +P + C
Sbjct: 1557 ITRHSQSETVPACSAGHTELWTGYS-LLYVDGNDYAHNQDL---GSCVPRFSTLPVLSC- 1611
Query: 182 GEGGTCHHFA-NKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 328
G+ C++ + N +FWLTT A+P +++ + + +SRC VC
Sbjct: 1612 GQNNVCNYASRNDKTFWLTT-----NAAIP-MMPVENIEIRQYISRCVVC 1655
>AE014134-846|AAN10520.1| 1779|Drosophila melanogaster CG4145-PC,
isoform C protein.
Length = 1779
Score = 154 bits (373), Expect = 9e-38
Identities = 65/114 (57%), Positives = 79/114 (69%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
IAVHSQT+++P CP GW LWIGYSF+MHT L SPGSCLEDFRA PFIECN
Sbjct: 1666 IAVHSQTIEVPDCPNGWEGLWIGYSFLMHTAVGNGGGGQALQSPGSCLEDFRATPFIECN 1725
Query: 182 GEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIKNTT 343
G GTCH + SFW+ +E SQ F P++QT+K+G VSRC VC+KN++
Sbjct: 1726 GAKGTCHFYETMTSFWMYNLESSQPFERPQQQTIKAGERQSHVSRCQVCMKNSS 1779
Score = 67.3 bits (157), Expect = 1e-11
Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
I HSQ+ +P C G +ELW GYS +++ L SPGSC+ F +P + C
Sbjct: 1558 ITRHSQSETVPACSAGHTELWTGYS-LLYVDGNDYAHNQDLGSPGSCVPRFSTLPVLSC- 1615
Query: 182 GEGGTCHHFA-NKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 328
G+ C++ + N +FWLTT A+P +++ + + +SRC VC
Sbjct: 1616 GQNNVCNYASRNDKTFWLTT-----NAAIP-MMPVENIEIRQYISRCVVC 1659
>AE014134-845|AAN10519.1| 1779|Drosophila melanogaster CG4145-PB,
isoform B protein.
Length = 1779
Score = 154 bits (373), Expect = 9e-38
Identities = 65/114 (57%), Positives = 79/114 (69%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
IAVHSQT+++P CP GW LWIGYSF+MHT L SPGSCLEDFRA PFIECN
Sbjct: 1666 IAVHSQTIEVPDCPNGWEGLWIGYSFLMHTAVGNGGGGQALQSPGSCLEDFRATPFIECN 1725
Query: 182 GEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIKNTT 343
G GTCH + SFW+ +E SQ F P++QT+K+G VSRC VC+KN++
Sbjct: 1726 GAKGTCHFYETMTSFWMYNLESSQPFERPQQQTIKAGERQSHVSRCQVCMKNSS 1779
Score = 67.3 bits (157), Expect = 1e-11
Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
I HSQ+ +P C G +ELW GYS +++ L SPGSC+ F +P + C
Sbjct: 1558 ITRHSQSETVPACSAGHTELWTGYS-LLYVDGNDYAHNQDLGSPGSCVPRFSTLPVLSC- 1615
Query: 182 GEGGTCHHFA-NKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 328
G+ C++ + N +FWLTT A+P +++ + + +SRC VC
Sbjct: 1616 GQNNVCNYASRNDKTFWLTT-----NAAIP-MMPVENIEIRQYISRCVVC 1659
>AE014134-844|AAF52204.1| 1779|Drosophila melanogaster CG4145-PA,
isoform A protein.
Length = 1779
Score = 154 bits (373), Expect = 9e-38
Identities = 65/114 (57%), Positives = 79/114 (69%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
IAVHSQT+++P CP GW LWIGYSF+MHT L SPGSCLEDFRA PFIECN
Sbjct: 1666 IAVHSQTIEVPDCPNGWEGLWIGYSFLMHTAVGNGGGGQALQSPGSCLEDFRATPFIECN 1725
Query: 182 GEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIKNTT 343
G GTCH + SFW+ +E SQ F P++QT+K+G VSRC VC+KN++
Sbjct: 1726 GAKGTCHFYETMTSFWMYNLESSQPFERPQQQTIKAGERQSHVSRCQVCMKNSS 1779
Score = 67.3 bits (157), Expect = 1e-11
Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
I HSQ+ +P C G +ELW GYS +++ L SPGSC+ F +P + C
Sbjct: 1558 ITRHSQSETVPACSAGHTELWTGYS-LLYVDGNDYAHNQDLGSPGSCVPRFSTLPVLSC- 1615
Query: 182 GEGGTCHHFA-NKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 328
G+ C++ + N +FWLTT A+P +++ + + +SRC VC
Sbjct: 1616 GQNNVCNYASRNDKTFWLTT-----NAAIP-MMPVENIEIRQYISRCVVC 1659
>M28334-1|AAA28422.1| 421|Drosophila melanogaster type VI-related
collagen protein.
Length = 421
Score = 153 bits (371), Expect = 1e-37
Identities = 65/114 (57%), Positives = 79/114 (69%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
IAVHSQT+++P CP GW LWIGYSF+MHT L SPGSCLEDFRA PFIECN
Sbjct: 308 IAVHSQTIEVPDCPNGWEGLWIGYSFLMHTAVGNGGGGQALQSPGSCLEDFRATPFIECN 367
Query: 182 GEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIKNTT 343
G GTCH + SFW+ +E SQ F P++QT+K+G VSRC VC+KN++
Sbjct: 368 GAKGTCHFYETITSFWMYNLESSQPFERPQQQTIKAGERQSHVSRCQVCMKNSS 421
Score = 56.8 bits (131), Expect = 2e-08
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
I HSQ+ +P C G +ELW GYS +++ L GSC+ F +P + C
Sbjct: 203 ITRHSQSETVPACSAGHTELWTGYS-LLYVDGNDYAHNQDL---GSCVPRFSTLPVLSC- 257
Query: 182 GEGGTCHHFA-NKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 328
G+ C++ + N +FWLTT A+P +++ + + +SRC VC
Sbjct: 258 GQNNVCNYASRNDKTFWLTT-----NAAIP-MMPVENIEIRQYISRCVVC 301
>U65431-1|AAB64082.1| 1761|Drosophila melanogaster collagen type IV
alpha 2 protein.
Length = 1761
Score = 123 bits (297), Expect = 1e-28
Identities = 55/109 (50%), Positives = 70/109 (64%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
IA+HSQ++ IP CP GW E+W GYS+ M T L SPGSCLE+FRA P IEC+
Sbjct: 1626 IALHSQSMSIPDCPGGWEEMWTGYSYFMSTLDNVGGVGQNLVSPGSCLEEFRAQPVIECH 1685
Query: 182 GEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 328
G G C+++ SFWLT IE+ QF P +QTLK+ ++SRC VC
Sbjct: 1686 GH-GRCNYYDALASFWLTVIEEQDQFVQPRQQTLKAD-FTSKISRCTVC 1732
Score = 58.0 bits (134), Expect = 8e-09
Identities = 41/115 (35%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Frame = +2
Query: 5 AVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNG 184
A HSQ++ +P CP + LW GYS + L GSC+ F +P++ C+
Sbjct: 1517 ARHSQSVHVPQCPANTNLLWEGYS-LSGNVAASRAVGQDLGQSGSCMMRFTTMPYMLCD- 1574
Query: 185 EGGTCHHFA--NKLSFWLTTIEDSQQFAMPERQTLKSGR-LLERVSRCAVCIKNT 340
C HFA N S WL+T E MP T GR L++ +SRC VC T
Sbjct: 1575 ITNVC-HFAQNNDDSLWLSTAE-----PMPMTMTPIQGRDLMKYISRCVVCETTT 1623
>AE014134-843|AAF52203.1| 1940|Drosophila melanogaster CG16858-PA
protein.
Length = 1940
Score = 123 bits (297), Expect = 1e-28
Identities = 55/109 (50%), Positives = 70/109 (64%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
IA+HSQ++ IP CP GW E+W GYS+ M T L SPGSCLE+FRA P IEC+
Sbjct: 1628 IALHSQSMSIPDCPGGWEEMWTGYSYFMSTLDNVGGVGQNLVSPGSCLEEFRAQPVIECH 1687
Query: 182 GEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 328
G G C+++ SFWLT IE+ QF P +QTLK+ ++SRC VC
Sbjct: 1688 GH-GRCNYYDALASFWLTVIEEQDQFVQPRQQTLKAD-FTSKISRCTVC 1734
Score = 58.0 bits (134), Expect = 8e-09
Identities = 41/115 (35%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Frame = +2
Query: 5 AVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNG 184
A HSQ++ +P CP + LW GYS + L GSC+ F +P++ C+
Sbjct: 1519 ARHSQSVHVPQCPANTNLLWEGYS-LSGNVAASRAVGQDLGQSGSCMMRFTTMPYMLCD- 1576
Query: 185 EGGTCHHFA--NKLSFWLTTIEDSQQFAMPERQTLKSGR-LLERVSRCAVCIKNT 340
C HFA N S WL+T E MP T GR L++ +SRC VC T
Sbjct: 1577 ITNVC-HFAQNNDDSLWLSTAE-----PMPMTMTPIQGRDLMKYISRCVVCETTT 1625
>DQ780943-1|ABH07113.1| 910|Drosophila melanogaster prominin
protein.
Length = 910
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = -2
Query: 397 IRGQISIWLLRTLSLFALCGVFDTNCTSGYTF*ETSRLKCLSLWHSKLLAVFD---GGQP 227
I G + +W++ + + C + ++N SG F L CL+ + VF GG
Sbjct: 467 IAGTVIVWVMLFMLMSYCCFLCESNAKSGVVFFIAVMLICLASICLTIFGVFSLAVGGNA 526
Query: 226 ETEFICK 206
E F+C+
Sbjct: 527 EV-FVCR 532
>BT029279-1|ABK30916.1| 1066|Drosophila melanogaster IP13255p
protein.
Length = 1066
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = -2
Query: 397 IRGQISIWLLRTLSLFALCGVFDTNCTSGYTF*ETSRLKCLSLWHSKLLAVFD---GGQP 227
I G + +W++ + + C + ++N SG F L CL+ + VF GG
Sbjct: 468 IAGTVIVWVMLFMLMSYCCFLCESNAKSGVVFFIAVMLICLASICLTIFGVFSLAVGGNA 527
Query: 226 ETEFICK 206
E F+C+
Sbjct: 528 EV-FVCR 533
>AE013599-3867|AAM68313.1| 670|Drosophila melanogaster CG30164-PA
protein.
Length = 670
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = -2
Query: 397 IRGQISIWLLRTLSLFALCGVFDTNCTSGYTF*ETSRLKCLSLWHSKLLAVFD---GGQP 227
I G + +W++ + + C + ++N SG F L CL+ + VF GG
Sbjct: 448 IAGTVIVWVMLFMLMSYCCFLCESNAKSGVVFFIAVMLICLASICLTIFGVFSLAVGGNA 507
Query: 226 ETEFICK 206
E F+C+
Sbjct: 508 EV-FVCR 513
>AY095526-1|AAM12257.1| 435|Drosophila melanogaster RE15519p
protein.
Length = 435
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +2
Query: 188 GGTCHHFANKLSFWLTTIEDSQQFAMP 268
GG C N +S+W T + ++AMP
Sbjct: 64 GGPCRMEDNNISYWNLTCDSPLEYAMP 90
>AE014298-746|AAF46037.2| 435|Drosophila melanogaster CG16752-PA
protein.
Length = 435
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +2
Query: 188 GGTCHHFANKLSFWLTTIEDSQQFAMP 268
GG C N +S+W T + ++AMP
Sbjct: 64 GGPCRMEDNNISYWNLTCDSPLEYAMP 90
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,550,398
Number of Sequences: 53049
Number of extensions: 472827
Number of successful extensions: 957
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 946
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2074444800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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