Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_E24
(542 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 177 3e-45
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 177 3e-45
J05066-1|AAA27989.1| 261|Caenorhabditis elegans alpha-2 (IV) co... 177 3e-45
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 175 2e-44
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 175 2e-44
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 175 2e-44
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 147 5e-36
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 147 5e-36
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 144 4e-35
J05067-1|AAB59179.1| 313|Caenorhabditis elegans clb-2 protein. 144 4e-35
U61955-9|AAC24409.3| 371|Caenorhabditis elegans Hypothetical pr... 29 2.2
AL031630-20|CAE17995.1| 122|Caenorhabditis elegans Hypothetical... 28 3.8
U14635-13|AAC46654.2| 322|Caenorhabditis elegans Hypothetical p... 28 5.0
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 177 bits (432), Expect = 3e-45
Identities = 76/113 (67%), Positives = 86/113 (76%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
IAVHSQT+ IP CP GWS LWIGYSF MHT L+SPGSCLEDFRA PFIECN
Sbjct: 1642 IAVHSQTIQIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSLSSPGSCLEDFRATPFIECN 1701
Query: 182 GEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIKNT 340
G G+CH+FANK SFWLTTI++ +F +PE QTLKSG L RVSRC VC+K+T
Sbjct: 1702 GARGSCHYFANKFSFWLTTIDNDSEFKVPESQTLKSGNLRTRVSRCQVCVKST 1754
Score = 66.9 bits (156), Expect = 9e-12
Identities = 36/106 (33%), Positives = 54/106 (50%)
Frame = +2
Query: 11 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 190
HSQT ++P CP G ++LW GYS +++ L GSCL+ F +PF+ C+
Sbjct: 1537 HSQTTEVPRCPEGQTKLWDGYS-LLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFCDFNN 1595
Query: 191 GTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 328
+ N S+WL+T E + ER+ + +SRCAVC
Sbjct: 1596 VCNYASRNDKSYWLSTSEAIPMMPVNERE------IEPYISRCAVC 1635
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 177 bits (432), Expect = 3e-45
Identities = 76/113 (67%), Positives = 86/113 (76%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
IAVHSQT+ IP CP GWS LWIGYSF MHT L+SPGSCLEDFRA PFIECN
Sbjct: 1643 IAVHSQTIQIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSLSSPGSCLEDFRATPFIECN 1702
Query: 182 GEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIKNT 340
G G+CH+FANK SFWLTTI++ +F +PE QTLKSG L RVSRC VC+K+T
Sbjct: 1703 GARGSCHYFANKFSFWLTTIDNDSEFKVPESQTLKSGNLRTRVSRCQVCVKST 1755
Score = 66.9 bits (156), Expect = 9e-12
Identities = 36/106 (33%), Positives = 54/106 (50%)
Frame = +2
Query: 11 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 190
HSQT ++P CP G ++LW GYS +++ L GSCL+ F +PF+ C+
Sbjct: 1538 HSQTTEVPRCPEGQTKLWDGYS-LLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFCDFNN 1596
Query: 191 GTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 328
+ N S+WL+T E + ER+ + +SRCAVC
Sbjct: 1597 VCNYASRNDKSYWLSTSEAIPMMPVNERE------IEPYISRCAVC 1636
>J05066-1|AAA27989.1| 261|Caenorhabditis elegans alpha-2 (IV)
collagen protein.
Length = 261
Score = 177 bits (432), Expect = 3e-45
Identities = 76/113 (67%), Positives = 86/113 (76%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
IAVHSQT+ IP CP GWS LWIGYSF MHT L+SPGSCLEDFRA PFIECN
Sbjct: 145 IAVHSQTIQIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSLSSPGSCLEDFRATPFIECN 204
Query: 182 GEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIKNT 340
G G+CH+FANK SFWLTTI++ +F +PE QTLKSG L RVSRC VC+K+T
Sbjct: 205 GARGSCHYFANKFSFWLTTIDNDSEFKVPESQTLKSGNLRTRVSRCQVCVKST 257
Score = 67.7 bits (158), Expect = 5e-12
Identities = 36/106 (33%), Positives = 55/106 (51%)
Frame = +2
Query: 11 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 190
HSQT ++P CP G ++LW GYS +++ L GSCL+ F +PF+ C+
Sbjct: 40 HSQTTEVPRCPEGQTKLWDGYS-LLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFCDFNN 98
Query: 191 GTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 328
+ N+ S+WL+T E + ER+ + +SRCAVC
Sbjct: 99 VCNYASRNEKSYWLSTSEAIPMMPVNERE------IEPYISRCAVC 138
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 175 bits (425), Expect = 2e-44
Identities = 75/113 (66%), Positives = 85/113 (75%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
IAVHSQT+ IP CP GWS LWIGYSF MHT +SPGSCLEDFRA PFIECN
Sbjct: 1643 IAVHSQTIQIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSPSSPGSCLEDFRATPFIECN 1702
Query: 182 GEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIKNT 340
G G+CH+FANK SFWLTTI++ +F +PE QTLKSG L RVSRC VC+K+T
Sbjct: 1703 GARGSCHYFANKFSFWLTTIDNDSEFKVPESQTLKSGNLRTRVSRCQVCVKST 1755
Score = 67.7 bits (158), Expect = 5e-12
Identities = 36/106 (33%), Positives = 55/106 (51%)
Frame = +2
Query: 11 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 190
HSQT ++P CP G ++LW GYS +++ L GSCL+ F +PF+ C+
Sbjct: 1538 HSQTTEVPRCPEGQTKLWDGYS-LLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFCDFNN 1596
Query: 191 GTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 328
+ N+ S+WL+T E + ER+ + +SRCAVC
Sbjct: 1597 VCNYASRNEKSYWLSTSEAIPMMPVNERE------IEPYISRCAVC 1636
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 175 bits (425), Expect = 2e-44
Identities = 75/113 (66%), Positives = 85/113 (75%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
IAVHSQT+ IP CP GWS LWIGYSF MHT +SPGSCLEDFRA PFIECN
Sbjct: 1642 IAVHSQTIQIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSPSSPGSCLEDFRATPFIECN 1701
Query: 182 GEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIKNT 340
G G+CH+FANK SFWLTTI++ +F +PE QTLKSG L RVSRC VC+K+T
Sbjct: 1702 GARGSCHYFANKFSFWLTTIDNDSEFKVPESQTLKSGNLRTRVSRCQVCVKST 1754
Score = 67.7 bits (158), Expect = 5e-12
Identities = 36/106 (33%), Positives = 55/106 (51%)
Frame = +2
Query: 11 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 190
HSQT ++P CP G ++LW GYS +++ L GSCL+ F +PF+ C+
Sbjct: 1537 HSQTTEVPRCPEGQTKLWDGYS-LLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFCDFNN 1595
Query: 191 GTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 328
+ N+ S+WL+T E + ER+ + +SRCAVC
Sbjct: 1596 VCNYASRNEKSYWLSTSEAIPMMPVNERE------IEPYISRCAVC 1635
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) collagen
protein.
Length = 1795
Score = 175 bits (425), Expect = 2e-44
Identities = 75/113 (66%), Positives = 85/113 (75%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
IAVHSQT+ IP CP GWS LWIGYSF MHT +SPGSCLEDFRA PFIECN
Sbjct: 1679 IAVHSQTIQIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSPSSPGSCLEDFRATPFIECN 1738
Query: 182 GEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIKNT 340
G G+CH+FANK SFWLTTI++ +F +PE QTLKSG L RVSRC VC+K+T
Sbjct: 1739 GARGSCHYFANKFSFWLTTIDNDSEFKVPESQTLKSGNLRTRVSRCQVCVKST 1791
Score = 67.7 bits (158), Expect = 5e-12
Identities = 36/106 (33%), Positives = 55/106 (51%)
Frame = +2
Query: 11 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 190
HSQT ++P CP G ++LW GYS +++ L GSCL+ F +PF+ C+
Sbjct: 1574 HSQTTEVPRCPEGQTKLWDGYS-LLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFCDFNN 1632
Query: 191 GTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 328
+ N+ S+WL+T E + ER+ + +SRCAVC
Sbjct: 1633 VCNYASRNEKSYWLSTSEAIPMMPVNERE------IEPYISRCAVC 1672
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical protein
K04H4.1b protein.
Length = 1502
Score = 147 bits (356), Expect = 5e-36
Identities = 63/112 (56%), Positives = 78/112 (69%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
IAVHSQ +P CP GWS +W GYSFVMHT L SPGSCLE+FRA+PFIEC+
Sbjct: 1391 IAVHSQDTSVPQCPQGWSGMWTGYSFVMHTAAGAEGTGQSLQSPGSCLEEFRAVPFIECH 1450
Query: 182 GEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIKN 337
G GTC+++A FWL+ ++ +QF P QTLK+G L +RVSRC VC+KN
Sbjct: 1451 GR-GTCNYYATNHGFWLSIVDQDKQFRKPMSQTLKAGGLKDRVSRCQVCLKN 1501
Score = 74.9 bits (176), Expect = 3e-14
Identities = 43/109 (39%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Frame = +2
Query: 5 AVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNG 184
A HSQT +P CP G S+LW GYS +++ L PGSCL F +PF+ CN
Sbjct: 1282 AKHSQTTAVPQCPPGASQLWEGYS-LLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFCN- 1339
Query: 185 EGGTCH-HFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 328
CH N SFWL+T E P T + +SRCAVC
Sbjct: 1340 MNSVCHVSSRNDYSFWLSTDEPMTPMMNPVTGT----AIRPYISRCAVC 1384
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical protein
K04H4.1a protein.
Length = 1759
Score = 147 bits (356), Expect = 5e-36
Identities = 63/112 (56%), Positives = 78/112 (69%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
IAVHSQ +P CP GWS +W GYSFVMHT L SPGSCLE+FRA+PFIEC+
Sbjct: 1648 IAVHSQDTSVPQCPQGWSGMWTGYSFVMHTAAGAEGTGQSLQSPGSCLEEFRAVPFIECH 1707
Query: 182 GEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIKN 337
G GTC+++A FWL+ ++ +QF P QTLK+G L +RVSRC VC+KN
Sbjct: 1708 GR-GTCNYYATNHGFWLSIVDQDKQFRKPMSQTLKAGGLKDRVSRCQVCLKN 1758
Score = 74.9 bits (176), Expect = 3e-14
Identities = 43/109 (39%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Frame = +2
Query: 5 AVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNG 184
A HSQT +P CP G S+LW GYS +++ L PGSCL F +PF+ CN
Sbjct: 1539 AKHSQTTAVPQCPPGASQLWEGYS-LLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFCN- 1596
Query: 185 EGGTCH-HFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 328
CH N SFWL+T E P T + +SRCAVC
Sbjct: 1597 MNSVCHVSSRNDYSFWLSTDEPMTPMMNPVTGT----AIRPYISRCAVC 1641
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) collagen
protein.
Length = 1758
Score = 144 bits (349), Expect = 4e-35
Identities = 62/112 (55%), Positives = 77/112 (68%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
IAVHSQ +P CP GWS +W GYSFVMHT L SPGSCLE+FRA+PFIEC+
Sbjct: 1647 IAVHSQDTSVPQCPQGWSGMWTGYSFVMHTAAGAEGTGQSLQSPGSCLEEFRAVPFIECH 1706
Query: 182 GEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIKN 337
G GTC+++A FW + ++ +QF P QTLK+G L +RVSRC VC+KN
Sbjct: 1707 GR-GTCNYYATNHGFWPSIVDQDKQFRKPMSQTLKAGGLKDRVSRCQVCLKN 1757
Score = 74.9 bits (176), Expect = 3e-14
Identities = 43/109 (39%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Frame = +2
Query: 5 AVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNG 184
A HSQT +P CP G S+LW GYS +++ L PGSCL F +PF+ CN
Sbjct: 1538 AKHSQTTAVPQCPPGASQLWEGYS-LLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFCN- 1595
Query: 185 EGGTCH-HFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 328
CH N SFWL+T E P T + +SRCAVC
Sbjct: 1596 MNSVCHVSSRNDYSFWLSTDEPMTPMMNPVTGT----AIRPYISRCAVC 1640
>J05067-1|AAB59179.1| 313|Caenorhabditis elegans clb-2 protein.
Length = 313
Score = 144 bits (349), Expect = 4e-35
Identities = 62/112 (55%), Positives = 77/112 (68%)
Frame = +2
Query: 2 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 181
IAVHSQ +P CP GWS +W GYSFVMHT L SPGSCLE+FRA+PFIEC+
Sbjct: 202 IAVHSQDTSVPQCPQGWSGMWTGYSFVMHTAAGAEGTGQSLQSPGSCLEEFRAVPFIECH 261
Query: 182 GEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVCIKN 337
G GTC+++A FW + ++ +QF P QTLK+G L +RVSRC VC+KN
Sbjct: 262 GR-GTCNYYATNHGFWPSIVDQDKQFRKPMSQTLKAGGLKDRVSRCQVCLKN 312
Score = 74.9 bits (176), Expect = 3e-14
Identities = 43/109 (39%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Frame = +2
Query: 5 AVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNG 184
A HSQT +P CP G S+LW GYS +++ L PGSCL F +PF+ CN
Sbjct: 93 AKHSQTTAVPQCPPGASQLWEGYS-LLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFCN- 150
Query: 185 EGGTCH-HFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSRCAVC 328
CH N SFWL+T E P T + +SRCAVC
Sbjct: 151 MNSVCHVSSRNDYSFWLSTDEPMTPMMNPVTGT----AIRPYISRCAVC 195
>U61955-9|AAC24409.3| 371|Caenorhabditis elegans Hypothetical
protein M03D4.6 protein.
Length = 371
Score = 29.1 bits (62), Expect = 2.2
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +3
Query: 291 DVS*NVYPDVQFVS-KTPHSANKLKVLNNQMLI*PLMQYLFKIQKKLIDHICNTLFKFLV 467
DV V P++ S ++ A K+K +N + + + + F I K+ C+++FK L
Sbjct: 158 DVFGQVMPEILLNSLRSARKARKIKPMNIVIYLCGMSESRFSIVKEEYVRNCHSVFKTLG 217
Query: 468 INYSQETTL 494
YS + T+
Sbjct: 218 EKYSPQLTI 226
>AL031630-20|CAE17995.1| 122|Caenorhabditis elegans Hypothetical
protein Y38H6C.23 protein.
Length = 122
Score = 28.3 bits (60), Expect = 3.8
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +2
Query: 122 LASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLK--SGR 295
L PG C+ED ++ I C E C+ N + + D+QQ M Q L S R
Sbjct: 48 LCGPGKCMEDPKSTTPIRCVCE--KCYIDKNGRAVYPGESTDNQQAPMNSEQQLDRLSDR 105
Query: 296 LLERVSR 316
L++ SR
Sbjct: 106 QLQQQSR 112
>U14635-13|AAC46654.2| 322|Caenorhabditis elegans Hypothetical
protein C27H5.6 protein.
Length = 322
Score = 27.9 bits (59), Expect = 5.0
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = -2
Query: 298 ETSRLKCLSLWHSKLLAVFDGGQPETEFICKVMASTTFTVTFYKWYRS 155
+TS +C++ + + +F G P T F C + V WYRS
Sbjct: 84 DTSSSQCMTAYLWPVFLLFGGQLPAT-FHCLLTVERVLAVNRVSWYRS 130
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,793,194
Number of Sequences: 27780
Number of extensions: 256187
Number of successful extensions: 619
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 605
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -