Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_E23
         (315 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U13220-1|AAC32226.1|  444|Homo sapiens forkhead protein FREAC-2 ...    31   0.94 
AL034346-1|CAI22285.1|  444|Homo sapiens forkhead box F2 protein.      31   0.94 
AF084939-1|AAD19875.1|  444|Homo sapiens forkhead transcription ...    31   0.94 
U77456-1|AAC50870.1|  375|Homo sapiens nucleosome assembly prote...    29   2.9  
BC022090-1|AAH22090.1|  375|Homo sapiens nucleosome assembly pro...    29   2.9  
AY686873-1|AAW67354.1|  127|Homo sapiens random intestinal-homin...    27   8.8  

>U13220-1|AAC32226.1|  444|Homo sapiens forkhead protein FREAC-2
           protein.
          Length = 444

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 14/45 (31%), Positives = 19/45 (42%)
 Frame = -3

Query: 166 RAAHSFTPVDDNHTLISNFYPVIVHKHRVGGSFSHLHHEGFVDDM 32
           R  H  TPV D    + NF  +        GS+ H HH+    D+
Sbjct: 395 RYQHHSTPVCDRKDFVLNFNGISSFHPSASGSYYHHHHQSVCQDI 439


>AL034346-1|CAI22285.1|  444|Homo sapiens forkhead box F2 protein.
          Length = 444

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 14/45 (31%), Positives = 19/45 (42%)
 Frame = -3

Query: 166 RAAHSFTPVDDNHTLISNFYPVIVHKHRVGGSFSHLHHEGFVDDM 32
           R  H  TPV D    + NF  +        GS+ H HH+    D+
Sbjct: 395 RYQHHSTPVCDRKDFVLNFNGISSFHPSASGSYYHHHHQSVCQDI 439


>AF084939-1|AAD19875.1|  444|Homo sapiens forkhead transcription
           factor protein.
          Length = 444

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 14/45 (31%), Positives = 19/45 (42%)
 Frame = -3

Query: 166 RAAHSFTPVDDNHTLISNFYPVIVHKHRVGGSFSHLHHEGFVDDM 32
           R  H  TPV D    + NF  +        GS+ H HH+    D+
Sbjct: 395 RYQHHSTPVCDRKDFVLNFNGISSFHPSASGSYYHHHHQSVCQDI 439


>U77456-1|AAC50870.1|  375|Homo sapiens nucleosome assembly protein
           2 protein.
          Length = 375

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = +2

Query: 17  FFVDSHVINKAFMMKMTKAATDPVLMNYYGIKVTDKSMVVIDWRKG 154
           +F +S V+ K + MK      DP   ++ G ++ D     IDW+KG
Sbjct: 215 YFTNS-VLTKTYKMKSEPDKADP--FSFEGPEIVDCDGCTIDWKKG 257


>BC022090-1|AAH22090.1|  375|Homo sapiens nucleosome assembly
           protein 1-like 4 protein.
          Length = 375

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = +2

Query: 17  FFVDSHVINKAFMMKMTKAATDPVLMNYYGIKVTDKSMVVIDWRKG 154
           +F +S V+ K + MK      DP   ++ G ++ D     IDW+KG
Sbjct: 215 YFTNS-VLTKTYKMKSEPDKADP--FSFEGPEIVDCDGCTIDWKKG 257


>AY686873-1|AAW67354.1|  127|Homo sapiens random intestinal-homing
           antibody heavy chain variable region protein.
          Length = 127

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +2

Query: 164 SLSEDDKYSYFTEDVDLNTYMYYLHMNYPYW 256
           SL  +D   Y+     LN Y YY    Y YW
Sbjct: 87  SLRSEDTAVYYCAREQLNYYNYYDSSGYHYW 117


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,302,307
Number of Sequences: 237096
Number of extensions: 600830
Number of successful extensions: 1302
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1302
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1453211950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)