Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_E19
(510 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6G10.08 |idp1||isocitrate dehydrogenase Idp1|Schizosaccharom... 221 6e-59
SPAC18B11.05 |gpi18||pig-V|Schizosaccharomyces pombe|chr 1|||Manual 28 0.93
SPAC24B11.14 ||SPAC806.10|sequence orphan|Schizosaccharomyces po... 27 1.2
SPAC11G7.03 |idh1|glu3|isocitrate dehydrogenase |Schizosaccharom... 26 2.9
SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|c... 26 3.8
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 26 3.8
SPAC4F10.18 |||WD repeat protein, human NUP37 family|Schizosacch... 25 5.0
SPAC57A10.06 |mug15||sequence orphan|Schizosaccharomyces pombe|c... 25 5.0
SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase Shk1|Schizosacc... 25 6.6
SPAC3H1.13 |ppk13||serine/threonine protein kinase Ppk13 |Schizo... 25 6.6
SPCC622.16c |epe1||Jmjc domain chromatin associated protein Epe1... 25 6.6
SPCC4E9.01c |rec11|SPCC550.16c|meiotic cohesin complex subunit R... 25 6.6
SPBP8B7.05c |||carbonic anhydrase |Schizosaccharomyces pombe|chr... 25 6.6
SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces pomb... 25 8.7
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 25 8.7
>SPAC6G10.08 |idp1||isocitrate dehydrogenase
Idp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 418
Score = 221 bits (539), Expect = 6e-59
Identities = 97/144 (67%), Positives = 120/144 (83%)
Frame = +3
Query: 78 PVVDILGDEMTRIIWDLIKEKLILPFLDIELHIYDLGIENRDKTDDQVTIDCAEAVKKYN 257
PVV++ GDEMTR+IW +I+EKL+LP++DI+L YDLGIE RDKT+DQ+T+D A+A+ K +
Sbjct: 19 PVVEMDGDEMTRVIWKIIREKLVLPYMDIKLDYYDLGIEARDKTNDQITVDAAKAILKND 78
Query: 258 VGIKCATITPDENRVEEFSLKKMWKSPNGTIRNILGGTVFREAIICNNIPRLVTGWDKPI 437
VGIKCATITPDE RV+E++LKKMWKSPNGTIRNIL GTVFRE I+ NIP+ + GW PI
Sbjct: 79 VGIKCATITPDEARVKEYNLKKMWKSPNGTIRNILNGTVFREPILIKNIPKYIPGWTNPI 138
Query: 438 IIGRHAHADQYQATDFVVPGAGKL 509
IGRHA DQY++TD V G GKL
Sbjct: 139 CIGRHAFGDQYKSTDLVASGPGKL 162
>SPAC18B11.05 |gpi18||pig-V|Schizosaccharomyces pombe|chr 1|||Manual
Length = 426
Score = 27.9 bits (59), Expect = 0.93
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = -3
Query: 358 ILRIVPFGLFHIFFKLNSSTLFSSGVMVAHLIPTLYFLTASAQSIVT*SSVLSRFS 191
+L I+P LF +F+ ++ STL S + +HL+ + +L + T VL+R S
Sbjct: 323 LLSIIPI-LFALFYSISGSTLHSFRSIKSHLVLSALYLYIGCFHMHT--QVLNRMS 375
>SPAC24B11.14 ||SPAC806.10|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 166
Score = 27.5 bits (58), Expect = 1.2
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -2
Query: 476 CLVLISMRMTTNDYWFVPSSDKTRNIITN 390
CL LIS+R +N + FVP ++ R + N
Sbjct: 12 CLRLISLRNCSNTWTFVPYANSNRGLNIN 40
>SPAC11G7.03 |idh1|glu3|isocitrate dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 26.2 bits (55), Expect = 2.9
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +3
Query: 90 ILGDEMTRIIWDLIKEKLILPFLDIELHIYDL-GIENRDKTDDQVTIDCAEAVKKYNVGI 266
I GD + R + + E + IE D+ G+E +K+ + +++K+ VG+
Sbjct: 26 IPGDGIGRETSNAVTEIFKTANVPIEFEEIDVTGMEKNNKSSGDALHEAIQSLKRNKVGL 85
Query: 267 KCATITPDE 293
K TP E
Sbjct: 86 KGILFTPFE 94
>SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1687
Score = 25.8 bits (54), Expect = 3.8
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 138 KLILPFLDIELHIYDLGIENRDKTDDQVTIDCAEAVK 248
+LI+ F D ELH + N+ + D AEAVK
Sbjct: 400 RLIMKFSDSELHTFLFHCVNKIVANTTENSDSAEAVK 436
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 25.8 bits (54), Expect = 3.8
Identities = 21/80 (26%), Positives = 38/80 (47%)
Frame = -3
Query: 313 LNSSTLFSSGVMVAHLIPTLYFLTASAQSIVT*SSVLSRFSMPKS*MCNSISKKGKISFS 134
LNSST +S +V P T + + +T SSVL+ + S + ++ I+ S
Sbjct: 3138 LNSSTPITSSTVVNSSTPITSSTTLNTSTPITSSSVLNSSTAITS--SSIVNSSTPITSS 3195
Query: 133 LIRSQIILVISSPKISTTGP 74
+ + + SS ++T+ P
Sbjct: 3196 SVLNSSTPITSSTTLNTSTP 3215
>SPAC4F10.18 |||WD repeat protein, human NUP37
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 391
Score = 25.4 bits (53), Expect = 5.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 48 IYNMSKIKAGPVVDILGDEMTRIIWDLIKEKLIL 149
+Y+ A V+ +GD+ T IIW L E IL
Sbjct: 145 VYSADNRLAEQVIASVGDDCTLIIWRLTDEGPIL 178
>SPAC57A10.06 |mug15||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 133
Score = 25.4 bits (53), Expect = 5.0
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +3
Query: 255 NVGIKCATITPDENRVEEFSLKKMWKSPNGTIRNILGGTVFREAIICNNIPRLV 416
+ GI +T+ P+ + + SL ++ KSP +N+L G + + + RLV
Sbjct: 32 DAGILKSTMIPELDALTTISLDELNKSPTVFTKNLLQGCGGTDLDVPAELKRLV 85
>SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase
Shk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 658
Score = 25.0 bits (52), Expect = 6.6
Identities = 15/65 (23%), Positives = 26/65 (40%)
Frame = +3
Query: 171 HIYDLGIENRDKTDDQVTIDCAEAVKKYNVGIKCATITPDENRVEEFSLKKMWKSPNGTI 350
H+++ GI +RD D + + +K + G CA I + + W +P
Sbjct: 495 HLHENGIVHRDIKSDNILLSLQGDIKLTDFGF-CAQIDSNMTKRTTMVGTPYWMAPEVVT 553
Query: 351 RNILG 365
R G
Sbjct: 554 RKEYG 558
>SPAC3H1.13 |ppk13||serine/threonine protein kinase Ppk13
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 344
Score = 25.0 bits (52), Expect = 6.6
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 5/35 (14%)
Frame = -2
Query: 350 NCTV-WTLPHFFQAEFFDSIF----IWSYGCTLDT 261
NCT+ + P F + +I IWS+GCTL T
Sbjct: 240 NCTMPFRAPELFHVKAGSTITEKADIWSFGCTLYT 274
>SPCC622.16c |epe1||Jmjc domain chromatin associated protein
Epe1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 948
Score = 25.0 bits (52), Expect = 6.6
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +3
Query: 132 KEKLILPFLDIELHIYDLGIENRDKTDDQVTIDCAEAVKKYNVGIKCATITPDENRVEEF 311
+ K L ++D GI N + +V + AE NVGIK I +EN + +F
Sbjct: 874 RRKNDLEYIDQHFASSKSGISNGRNNNKEVNLTKAE-----NVGIKKRRIMKNENNIYDF 928
>SPCC4E9.01c |rec11|SPCC550.16c|meiotic cohesin complex subunit
Rec11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 923
Score = 25.0 bits (52), Expect = 6.6
Identities = 10/45 (22%), Positives = 22/45 (48%)
Frame = -2
Query: 323 FFQAEFFDSIFIWSYGCTLDTNIILFDSFSTVNCDLIICLISVFN 189
F F ++ W + T +++ + +T+ CD++ CL + N
Sbjct: 200 FLGDSFMETTKAWIFTMTTSPWMLVRHTATTICCDIMRCLCLIVN 244
>SPBP8B7.05c |||carbonic anhydrase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 25.0 bits (52), Expect = 6.6
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 336 PNGTIRNILGGTVFREAIICNNIPR 410
P TI N+L G VF I N +PR
Sbjct: 85 PETTILNLLPGEVFVHRNIANVVPR 109
>SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 952
Score = 24.6 bits (51), Expect = 8.7
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 190 LKTEIRQMIKSQLTVLKLSKSIMLVSSVQP*LQMKIESKNS 312
LK++IR +LT+ KL S+ +S LQ +I KN+
Sbjct: 520 LKSQIRDQ---ELTIEKLHDSLETLSQTNNSLQCEISEKNA 557
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 24.6 bits (51), Expect = 8.7
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = -2
Query: 329 PHFFQAEFFDSIFIWSYGCTLDTNIILF 246
P + FD W +GCTL + LF
Sbjct: 1939 PSSTACQMFDCFMCWFFGCTLISGPQLF 1966
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,119,468
Number of Sequences: 5004
Number of extensions: 43770
Number of successful extensions: 126
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 126
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 204242806
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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