Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_E19
(510 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0109 - 26526691-26526775,26526894-26527019,26527228-265273... 228 2e-60
05_07_0194 + 28327328-28327376,28327699-28327742,28327852-283279... 227 4e-60
01_01_1031 + 8169505-8169553,8169831-8169905,8170395-8170438,817... 201 2e-52
04_04_0457 + 25359486-25359571,25360690-25360782,25361561-253616... 113 1e-25
03_02_0714 + 10617860-10618588 33 0.13
03_05_0924 + 28861561-28861692,28861970-28862262,28862841-28863657 29 1.6
06_03_0592 + 22585546-22588573,22588680-22589032 29 2.9
06_03_0590 + 22574985-22578018,22578125-22578469,22579171-225792... 28 3.8
02_05_1173 - 34686009-34686090,34686276-34686342,34686707-346867... 28 5.0
08_02_0002 + 11173365-11173512,11173528-11178470 27 6.6
11_03_0065 - 9522478-9525335,9525513-9526028,9526432-9527247,952... 27 8.8
11_01_0635 - 5091381-5091562,5092800-5092866,5093079-5093960 27 8.8
10_08_1006 - 22194013-22196054,22197357-22198337,22198974-22199301 27 8.8
10_05_0012 + 7874326-7874831,7929715-7931393,7931508-7933396 27 8.8
08_02_0010 - 11230407-11232416 27 8.8
08_02_0009 + 11216532-11218687,11220727-11225998 27 8.8
08_02_0006 + 11204835-11206382 27 8.8
08_02_0003 + 11180421-11180757,11180773-11185715 27 8.8
08_01_1086 - 11150017-11151564 27 8.8
02_02_0537 + 11308195-11309667 27 8.8
>01_06_0109 -
26526691-26526775,26526894-26527019,26527228-26527370,
26527521-26527555,26527676-26527791,26527868-26527936,
26528070-26528173,26528253-26528338,26528429-26528530,
26528609-26528662,26528763-26528840,26528936-26528973,
26529235-26529344,26529463-26529506,26530232-26530280
Length = 412
Score = 228 bits (557), Expect = 2e-60
Identities = 104/150 (69%), Positives = 123/150 (82%), Gaps = 1/150 (0%)
Frame = +3
Query: 63 KIK-AGPVVDILGDEMTRIIWDLIKEKLILPFLDIELHIYDLGIENRDKTDDQVTIDCAE 239
KIK A P+V++ GDEMTRI W IK+KLI PFLD+++ YDLG+ +RD TDD+VT++ AE
Sbjct: 5 KIKVANPIVEMDGDEMTRIFWQSIKDKLIFPFLDLDIKYYDLGVLHRDATDDKVTVEAAE 64
Query: 240 AVKKYNVGIKCATITPDENRVEEFSLKKMWKSPNGTIRNILGGTVFREAIICNNIPRLVT 419
A KYNV IKCATITPDE RV+EF+LK+MWKSPNGTIRNI+ GTVFRE IIC N+PRLV
Sbjct: 65 ATLKYNVAIKCATITPDEARVKEFNLKQMWKSPNGTIRNIINGTVFREPIICKNVPRLVP 124
Query: 420 GWDKPIIIGRHAHADQYQATDFVVPGAGKL 509
GW KPI IGRHA DQY+ATD V+ G GKL
Sbjct: 125 GWTKPICIGRHAFGDQYRATDAVLKGPGKL 154
>05_07_0194 +
28327328-28327376,28327699-28327742,28327852-28327961,
28328250-28328287,28328371-28328448,28328527-28328580,
28328663-28328764,28329152-28329237,28329327-28329430,
28329542-28329610,28329689-28329804,28329949-28329983,
28330152-28330294,28330473-28330598,28330700-28330784
Length = 412
Score = 227 bits (555), Expect = 4e-60
Identities = 104/151 (68%), Positives = 123/151 (81%), Gaps = 1/151 (0%)
Frame = +3
Query: 60 SKIK-AGPVVDILGDEMTRIIWDLIKEKLILPFLDIELHIYDLGIENRDKTDDQVTIDCA 236
+KIK A P+V++ GDEMTR+ W IK+KLI PFL++++ +DLG+ RD+TDD+VT++ A
Sbjct: 4 TKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPYRDQTDDKVTVEAA 63
Query: 237 EAVKKYNVGIKCATITPDENRVEEFSLKKMWKSPNGTIRNILGGTVFREAIICNNIPRLV 416
EA KYNV IKCATITPDE RV+EFSLK MWKSPNGTIRNIL GTVFRE IIC NIPRLV
Sbjct: 64 EATLKYNVAIKCATITPDEARVKEFSLKSMWKSPNGTIRNILNGTVFREPIICKNIPRLV 123
Query: 417 TGWDKPIIIGRHAHADQYQATDFVVPGAGKL 509
GW KPI IGRHA DQY+ATD V+ G GKL
Sbjct: 124 PGWTKPICIGRHAFGDQYRATDAVIKGPGKL 154
>01_01_1031 +
8169505-8169553,8169831-8169905,8170395-8170438,
8170633-8170742,8170960-8170997,8171055-8171186,
8171298-8171351,8171424-8171525,8172679-8172764,
8172870-8172973,8173056-8173124,8173156-8173209,
8173210-8173325,8173420-8173454,8173637-8173779,
8174105-8174227,8174305-8174398
Length = 475
Score = 201 bits (491), Expect = 2e-52
Identities = 100/156 (64%), Positives = 112/156 (71%), Gaps = 18/156 (11%)
Frame = +3
Query: 96 GDEMTRIIWDLIKEKLILPFLDIELHIYDLGIENRDKTDDQVTIDCAEAVKKYNVGIKCA 275
GDEMTR+IW IK+KLI PFLD+++ YDLG+ NRD T D+VTI+ AEA KYNV IKCA
Sbjct: 42 GDEMTRVIWKWIKDKLIFPFLDLDIKYYDLGLPNRDATGDKVTIESAEATLKYNVAIKCA 101
Query: 276 TITP------------------DENRVEEFSLKKMWKSPNGTIRNILGGTVFREAIICNN 401
TITP DE RV+EF+L MWKSPNGTIRNIL GTVFRE IIC N
Sbjct: 102 TITPVLDTQFKFDFGRTIHEPTDEGRVKEFNLSAMWKSPNGTIRNILNGTVFREPIICKN 161
Query: 402 IPRLVTGWDKPIIIGRHAHADQYQATDFVVPGAGKL 509
IPRLV GW KPI IGRHA DQY+ATD V+ G GKL
Sbjct: 162 IPRLVPGWIKPICIGRHAFGDQYRATDTVIKGPGKL 197
>04_04_0457 +
25359486-25359571,25360690-25360782,25361561-25361622,
25361758-25361816,25363624-25363733,25364795-25364829,
25365469-25365546,25365952-25366005,25366277-25366362,
25366468-25366571,25366986-25367054,25367135-25367250,
25367387-25367421,25367512-25367654,25367808-25367930,
25368463-25368556
Length = 448
Score = 113 bits (271), Expect = 1e-25
Identities = 51/95 (53%), Positives = 70/95 (73%)
Frame = +3
Query: 135 EKLILPFLDIELHIYDLGIENRDKTDDQVTIDCAEAVKKYNVGIKCATITPDENRVEEFS 314
+ LI P+L++++ +DLG+ NRD TDD+VT++ AEA T+T DE RV+EF
Sbjct: 99 DDLIFPYLELDVKYFDLGLLNRDATDDKVTVESAEATLDLYSNSFFMTLT-DETRVKEFK 157
Query: 315 LKKMWKSPNGTIRNILGGTVFREAIICNNIPRLVT 419
LK MW+SPNGTIRNIL GTVFRE I+C N+PR+++
Sbjct: 158 LKSMWRSPNGTIRNILNGTVFREPILCKNVPRILS 192
>03_02_0714 + 10617860-10618588
Length = 242
Score = 33.1 bits (72), Expect = 0.13
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Frame = -3
Query: 436 IGLSHPVTRRGILLQMIASLKTVP--PRILRIVPFGLFHIFFKLNSST-LFSSGVMVAHL 266
+GLS R G +Q + +L+ P P + ++ +G +++ L L +G++ AHL
Sbjct: 74 VGLSRKAFRLGKFVQNVNALRAHPHPPPAVALLAYGGEGVYYFLEQFVWLAKAGLLPAHL 133
Query: 265 IPTLYFLTASAQ 230
+P L L+A A+
Sbjct: 134 LPRLQRLSAWAE 145
>03_05_0924 + 28861561-28861692,28861970-28862262,28862841-28863657
Length = 413
Score = 29.5 bits (63), Expect = 1.6
Identities = 18/65 (27%), Positives = 27/65 (41%)
Frame = -2
Query: 434 WFVPSSDKTRNIITNDSFPEDCTTKNITNCTVWTLPHFFQAEFFDSIFIWSYGCTLDTNI 255
W DK ++T DS P T+ + WT P+F S+ C L + +
Sbjct: 269 WGSEEEDKLNQVMTTDSRPSPQTSTSHPEMASWTSPNFSAGGPSQSV----KPCRLRSYV 324
Query: 254 ILFDS 240
+ FDS
Sbjct: 325 MSFDS 329
>06_03_0592 + 22585546-22588573,22588680-22589032
Length = 1126
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/37 (32%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +3
Query: 27 LLNYLTRIYNMSKIKAGPVVDILGDEMTRIIW-DLIK 134
+L+Y+ RIY M +++A P + D + I + D++K
Sbjct: 782 ILSYVVRIYGMKEMQANPHCQQINDHVKNITYQDIVK 818
>06_03_0590 +
22574985-22578018,22578125-22578469,22579171-22579217,
22579450-22579573,22579622-22579686
Length = 1204
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/37 (29%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +3
Query: 27 LLNYLTRIYNMSKIKAGPVVDILGDEMTRIIW-DLIK 134
+L+Y+ RIY +++A P ++ + M I + D++K
Sbjct: 784 ILSYVVRIYRRKEMQANPHCQLISEHMKNITYQDIVK 820
>02_05_1173 -
34686009-34686090,34686276-34686342,34686707-34686758,
34687111-34687172,34688380-34688416
Length = 99
Score = 27.9 bits (59), Expect = 5.0
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +3
Query: 135 EKLILPFLDIELHIYDLGIENRDKTDDQVTIDCAEAVKKYNVGI 266
EKL+ L +EL +Y NR+KTDD V + +GI
Sbjct: 58 EKLLSKCLVVELFLY----RNREKTDDVVIVSALNRKPMEEIGI 97
>08_02_0002 + 11173365-11173512,11173528-11178470
Length = 1696
Score = 27.5 bits (58), Expect = 6.6
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +3
Query: 69 KAGPVVDILGDEMTRIIWDLIKEKLILPFLDIELHIYDLGIENRDK 206
K + G ++ +IW KE+ + FL ++ + +DL +E R++
Sbjct: 1409 KTEQTLSCFGQDILDLIWQKFKERQMKIFLGLQDYFFDL-LEGRER 1453
>11_03_0065 - 9522478-9525335,9525513-9526028,9526432-9527247,
9527440-9527767
Length = 1505
Score = 27.1 bits (57), Expect = 8.8
Identities = 11/46 (23%), Positives = 25/46 (54%)
Frame = +3
Query: 69 KAGPVVDILGDEMTRIIWDLIKEKLILPFLDIELHIYDLGIENRDK 206
K + G ++ ++W KE+ + FL ++ + +DL +E R++
Sbjct: 1218 KTEQTLSCFGQDILDLVWQKFKERQMKIFLGLQDYFFDL-LEGRER 1262
>11_01_0635 - 5091381-5091562,5092800-5092866,5093079-5093960
Length = 376
Score = 27.1 bits (57), Expect = 8.8
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = -2
Query: 317 QAEFFDSIFIWSYGCTLDTNIILFDSFSTVNCD 219
Q EF D + + G LDT +++FD + ++ +
Sbjct: 74 QKEFLDRLLLLRDGAPLDTCVLMFDYYGDMDIE 106
>10_08_1006 - 22194013-22196054,22197357-22198337,22198974-22199301
Length = 1116
Score = 27.1 bits (57), Expect = 8.8
Identities = 11/46 (23%), Positives = 25/46 (54%)
Frame = +3
Query: 69 KAGPVVDILGDEMTRIIWDLIKEKLILPFLDIELHIYDLGIENRDK 206
K + G ++ ++W KE+ + FL ++ + +DL +E R++
Sbjct: 829 KTEQTLSCFGQDILDLVWQKFKERQMKIFLGLQDYFFDL-LEGRER 873
>10_05_0012 + 7874326-7874831,7929715-7931393,7931508-7933396
Length = 1357
Score = 27.1 bits (57), Expect = 8.8
Identities = 11/46 (23%), Positives = 25/46 (54%)
Frame = +3
Query: 69 KAGPVVDILGDEMTRIIWDLIKEKLILPFLDIELHIYDLGIENRDK 206
K + G ++ ++W KE+ + FL ++ + +DL +E R++
Sbjct: 1070 KTEQTLSCFGQDILDLVWQKFKERQMKIFLGLQDYFFDL-LEGRER 1114
>08_02_0010 - 11230407-11232416
Length = 669
Score = 27.1 bits (57), Expect = 8.8
Identities = 11/46 (23%), Positives = 25/46 (54%)
Frame = +3
Query: 69 KAGPVVDILGDEMTRIIWDLIKEKLILPFLDIELHIYDLGIENRDK 206
K + G ++ ++W KE+ + FL ++ + +DL +E R++
Sbjct: 382 KTEQTLSCFGQDILDLVWQKFKERQMKIFLGLQDYFFDL-LEGRER 426
>08_02_0009 + 11216532-11218687,11220727-11225998
Length = 2475
Score = 27.1 bits (57), Expect = 8.8
Identities = 11/46 (23%), Positives = 25/46 (54%)
Frame = +3
Query: 69 KAGPVVDILGDEMTRIIWDLIKEKLILPFLDIELHIYDLGIENRDK 206
K + G ++ ++W KE+ + FL ++ + +DL +E R++
Sbjct: 2188 KTEQTLSCFGQDILDLVWQKFKERQMKIFLGLQDYFFDL-LEGRER 2232
>08_02_0006 + 11204835-11206382
Length = 515
Score = 27.1 bits (57), Expect = 8.8
Identities = 11/46 (23%), Positives = 25/46 (54%)
Frame = +3
Query: 69 KAGPVVDILGDEMTRIIWDLIKEKLILPFLDIELHIYDLGIENRDK 206
K + G ++ ++W KE+ + FL ++ + +DL +E R++
Sbjct: 228 KTEQTLSCFGQDILDLVWQKFKERQMKIFLGLQDYFFDL-LEGRER 272
>08_02_0003 + 11180421-11180757,11180773-11185715
Length = 1759
Score = 27.1 bits (57), Expect = 8.8
Identities = 11/46 (23%), Positives = 25/46 (54%)
Frame = +3
Query: 69 KAGPVVDILGDEMTRIIWDLIKEKLILPFLDIELHIYDLGIENRDK 206
K + G ++ ++W KE+ + FL ++ + +DL +E R++
Sbjct: 1472 KTEQTLSCFGQDILDLVWQKFKERQMKIFLGLQDYFFDL-LEGRER 1516
>08_01_1086 - 11150017-11151564
Length = 515
Score = 27.1 bits (57), Expect = 8.8
Identities = 11/46 (23%), Positives = 25/46 (54%)
Frame = +3
Query: 69 KAGPVVDILGDEMTRIIWDLIKEKLILPFLDIELHIYDLGIENRDK 206
K + G ++ ++W KE+ + FL ++ + +DL +E R++
Sbjct: 228 KTEQTLSCFGQDILDLVWQKFKERQMKIFLGLQDYFFDL-LEGRER 272
>02_02_0537 + 11308195-11309667
Length = 490
Score = 27.1 bits (57), Expect = 8.8
Identities = 11/46 (23%), Positives = 25/46 (54%)
Frame = +3
Query: 69 KAGPVVDILGDEMTRIIWDLIKEKLILPFLDIELHIYDLGIENRDK 206
K + G ++ ++W KE+ + FL ++ + +DL +E R++
Sbjct: 228 KTEQTLSCFGQDILDLVWQKFKERQMKIFLGLQDYFFDL-LEGRER 272
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,645,886
Number of Sequences: 37544
Number of extensions: 241271
Number of successful extensions: 668
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 666
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1095026320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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