Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_E17
         (550 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    24   0.76 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   4.1  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    22   4.1  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   5.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.4  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 24.2 bits (50), Expect = 0.76
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -3

Query: 197 FTSSVILTSSIFKTTTS 147
           F S +I++ SIF TTTS
Sbjct: 232 FYSKIIISGSIFMTTTS 248


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +2

Query: 380 ITILGVKLMVITKNIWNFLKVNTVNYSNMLTR 475
           + +L  K  V+ + I    K+N  +Y N L++
Sbjct: 188 VVVLKQKFCVVNQYIKQVCKLNNGHYKNFLSQ 219


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +2

Query: 380 ITILGVKLMVITKNIWNFLKVNTVNYSNMLTR 475
           + +L  K  V+ + I    K+N  +Y N L++
Sbjct: 13  VVVLKQKFCVVNQYIKQVCKLNNGHYKNFLSQ 44


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = +3

Query: 213 SVFYNRGSWTKPSR*YWNCKTTNKSS*RCW 302
           + FY R +WT+  +   +C    K+   C+
Sbjct: 86  TTFYKRRTWTRLLKNLESCAKIKKTKRYCY 115


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +1

Query: 457  FKYAHEIGILFTASAMDMVSFDFLV 531
            F+  +EIG+  T   ++ + F FL+
Sbjct: 1265 FEDKNEIGVYITYLQLEPIGFVFLI 1289


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +1

Query: 457  FKYAHEIGILFTASAMDMVSFDFLV 531
            F+  +EIG+  T   ++ + F FL+
Sbjct: 1265 FEDKNEIGVYITYLQLEPIGFVFLI 1289


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +3

Query: 111  GDPVFVCLFLWNARCGFKYARS*DN 185
            G  V V +  WN   G KY+R  +N
Sbjct: 1893 GIKVLVAIGGWNDSAGDKYSRLVNN 1917



 Score = 20.6 bits (41), Expect = 9.4
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 111  GDPVFVCLFLWNARCGFKYAR 173
            G  V + L  WN   G KY+R
Sbjct: 2391 GVKVLIALGGWNDSAGNKYSR 2411


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,533
Number of Sequences: 336
Number of extensions: 2941
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)