Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_E17
         (550 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68316-6|CAA92682.2|  357|Caenorhabditis elegans Hypothetical pr...    31   0.72 
Z66520-9|CAA91390.2|  335|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z47357-11|CAA87428.3|  303|Caenorhabditis elegans Hypothetical p...    29   2.9  
Z30662-12|CAA83142.3|  303|Caenorhabditis elegans Hypothetical p...    29   2.9  
U22184-1|AAA64847.1|  348|Caenorhabditis elegans Wnt protein pro...    28   3.9  
U22179-1|AAA64846.1|  348|Caenorhabditis elegans Wnt protein pro...    28   3.9  
AC006627-1|AAK85460.1|  348|Caenorhabditis elegans Abnormal cell...    28   3.9  
U15304-1|AAA50369.1|  407|Caenorhabditis elegans PES-10 protein.       27   6.7  
AL110485-21|CAB60370.1|  407|Caenorhabditis elegans Hypothetical...    27   6.7  
AL023842-5|CAA19519.1|  393|Caenorhabditis elegans Hypothetical ...    27   6.7  
Z72514-9|CAA96680.3|  449|Caenorhabditis elegans Hypothetical pr...    27   8.9  
Z68001-3|CAO78709.1|  449|Caenorhabditis elegans Hypothetical pr...    27   8.9  

>Z68316-6|CAA92682.2|  357|Caenorhabditis elegans Hypothetical
           protein K08E4.5 protein.
          Length = 357

 Score = 30.7 bits (66), Expect = 0.72
 Identities = 15/51 (29%), Positives = 28/51 (54%)
 Frame = +2

Query: 371 LMIITILGVKLMVITKNIWNFLKVNTVNYSNMLTRSVFYLLPLLWTWYLSI 523
           + + T+  +KL +ITK I   + +N+VNY  +   S+ +     W +Y S+
Sbjct: 219 IALCTVCALKLKMITKEISTVISINSVNY-YLFWISIIHFSTSFW-YYFSV 267


>Z66520-9|CAA91390.2|  335|Caenorhabditis elegans Hypothetical
           protein F49E12.5a protein.
          Length = 335

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 373 YDNHNSWGKTYGDHKKHLEFSESQYRELFKYAHEIGILF 489
           Y NH  +  TY   K H+    + Y  +F +  +IG+++
Sbjct: 176 YVNHCGFYPTYSQDKFHIFLDVTLYLAVFNFVFDIGLMY 214


>Z47357-11|CAA87428.3|  303|Caenorhabditis elegans Hypothetical
           protein T16H12.9 protein.
          Length = 303

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 17/59 (28%), Positives = 28/59 (47%)
 Frame = +1

Query: 277 LIKAAKDAGASCVKFQKTCLKEKFTKKYLERSYDNHNSWGKTYGDHKKHLEFSESQYRE 453
           L K   D  AS V    TC K  FT++  ++S+D+ +    +  D  K  E  + + R+
Sbjct: 101 LAKDINDIVASQVDSNSTCTKYGFTRQQQKKSHDDDDDDDDSDSDESKEEEEKKKRDRK 159


>Z30662-12|CAA83142.3|  303|Caenorhabditis elegans Hypothetical
           protein T16H12.9 protein.
          Length = 303

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 17/59 (28%), Positives = 28/59 (47%)
 Frame = +1

Query: 277 LIKAAKDAGASCVKFQKTCLKEKFTKKYLERSYDNHNSWGKTYGDHKKHLEFSESQYRE 453
           L K   D  AS V    TC K  FT++  ++S+D+ +    +  D  K  E  + + R+
Sbjct: 101 LAKDINDIVASQVDSNSTCTKYGFTRQQQKKSHDDDDDDDDSDSDESKEEEEKKKRDRK 159


>U22184-1|AAA64847.1|  348|Caenorhabditis elegans Wnt protein
           protein.
          Length = 348

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 22/72 (30%), Positives = 28/72 (38%)
 Frame = +1

Query: 196 KVGGNNPCFIIAEVGQNHQGDIGIAKQLIKAAKDAGASCVKFQKTCLKEKFTKKYLERSY 375
           KVG  N      E      G + I K LI + K  G S    QKTC K   T +++    
Sbjct: 182 KVGAVNTLLRKVEKHNLKAGRLAIKKTLISSCKCHGVSGSCQQKTCWKRTATLEHITDYL 241

Query: 376 DNHNSWGKTYGD 411
               +  K Y D
Sbjct: 242 VEKYARAKLYTD 253


>U22179-1|AAA64846.1|  348|Caenorhabditis elegans Wnt protein
           protein.
          Length = 348

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 22/72 (30%), Positives = 28/72 (38%)
 Frame = +1

Query: 196 KVGGNNPCFIIAEVGQNHQGDIGIAKQLIKAAKDAGASCVKFQKTCLKEKFTKKYLERSY 375
           KVG  N      E      G + I K LI + K  G S    QKTC K   T +++    
Sbjct: 182 KVGAVNTLLRKVEKHNLKAGRLAIKKTLISSCKCHGVSGSCQQKTCWKRTATLEHITDYL 241

Query: 376 DNHNSWGKTYGD 411
               +  K Y D
Sbjct: 242 VEKYARAKLYTD 253


>AC006627-1|AAK85460.1|  348|Caenorhabditis elegans Abnormal cell
           lineage protein 44,isoform a protein.
          Length = 348

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 22/72 (30%), Positives = 28/72 (38%)
 Frame = +1

Query: 196 KVGGNNPCFIIAEVGQNHQGDIGIAKQLIKAAKDAGASCVKFQKTCLKEKFTKKYLERSY 375
           KVG  N      E      G + I K LI + K  G S    QKTC K   T +++    
Sbjct: 182 KVGAVNTLLRKVEKHNLKAGRLAIKKTLISSCKCHGVSGSCQQKTCWKRTATLEHITDYL 241

Query: 376 DNHNSWGKTYGD 411
               +  K Y D
Sbjct: 242 VEKYARAKLYTD 253


>U15304-1|AAA50369.1|  407|Caenorhabditis elegans PES-10 protein.
          Length = 407

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
 Frame = +1

Query: 319 FQKTCLKEKFTKKYLERSYDNHNSWGKTYGDHKKHLEFSE--SQYRELFK 462
           F    L  K+  +YL   Y +HN   +   +H KHL+  E   + +E FK
Sbjct: 269 FYPLALLRKYDIQYLIYCYGSHNEDAELLMNHIKHLQAIEIAGERQEFFK 318


>AL110485-21|CAB60370.1|  407|Caenorhabditis elegans Hypothetical
           protein Y46G5A.27 protein.
          Length = 407

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
 Frame = +1

Query: 319 FQKTCLKEKFTKKYLERSYDNHNSWGKTYGDHKKHLEFSE--SQYRELFK 462
           F    L  K+  +YL   Y +HN   +   +H KHL+  E   + +E FK
Sbjct: 269 FYPLALLRKYDIQYLIYCYGSHNEDAELLMNHIKHLQAIEIAGERQEFFK 318


>AL023842-5|CAA19519.1|  393|Caenorhabditis elegans Hypothetical
           protein Y44A6D.5 protein.
          Length = 393

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 18/63 (28%), Positives = 29/63 (46%)
 Frame = -3

Query: 224 IKHGLLPPTFTSSVILTSSIFKTTTSVP*KQTNENRVPVQAGSLGNKLSLRNNRFIDLPF 45
           I  GLL  +F SS +  +  F+    V  K T + R+P     LG      ++  ID+ +
Sbjct: 4   ISSGLLKRSFISSSLRCTHSFQYANLVVEKSTKKQRIPSDPAKLGFGRYF-SDHMIDIDW 62

Query: 44  KIK 36
            +K
Sbjct: 63  DVK 65


>Z72514-9|CAA96680.3|  449|Caenorhabditis elegans Hypothetical
           protein T10B10.8 protein.
          Length = 449

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = -2

Query: 318 FNAACTSIFSC-FY*LFCNSNITLMVLSNFRDYKTRIVAANFYVL 187
           F+    SI SC F+ + C +   L+VL     + TR++ A F++L
Sbjct: 370 FDVKIQSIISCVFFTMLCYALAWLIVLQ-ISHFNTRVLTAIFFIL 413


>Z68001-3|CAO78709.1|  449|Caenorhabditis elegans Hypothetical
           protein T10B10.8 protein.
          Length = 449

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = -2

Query: 318 FNAACTSIFSC-FY*LFCNSNITLMVLSNFRDYKTRIVAANFYVL 187
           F+    SI SC F+ + C +   L+VL     + TR++ A F++L
Sbjct: 370 FDVKIQSIISCVFFTMLCYALAWLIVLQ-ISHFNTRVLTAIFFIL 413


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,670,208
Number of Sequences: 27780
Number of extensions: 261532
Number of successful extensions: 749
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 749
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)