Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_E13
         (562 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   3.1  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    22   4.1  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    22   4.1  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    22   4.1  
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    21   7.2  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    21   7.2  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    21   7.2  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    21   9.6  

>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -3

Query: 218 LCNTMRVPEHDTDLGRSKTLFAKFEDLFL 132
           +CN+    E +T     +T+FA F D  +
Sbjct: 444 ICNSFTKFEFNTVFNDQRTVFANFYDAMI 472


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 10/34 (29%), Positives = 15/34 (44%)
 Frame = -3

Query: 386 TRFNRNWRSLVLPITFQRFPHGDSLLDQVVQIFR 285
           TR + NW   +  I +  +     L D+V Q  R
Sbjct: 338 TRLDDNWNKYIPAILYYNYTVDRDLQDEVSQKIR 371


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 10/34 (29%), Positives = 15/34 (44%)
 Frame = -3

Query: 386 TRFNRNWRSLVLPITFQRFPHGDSLLDQVVQIFR 285
           TR + NW   +  I +  +     L D+V Q  R
Sbjct: 338 TRLDDNWNKYIPAILYYNYTVDRDLQDEVSQKIR 371


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 10/34 (29%), Positives = 15/34 (44%)
 Frame = -3

Query: 386 TRFNRNWRSLVLPITFQRFPHGDSLLDQVVQIFR 285
           TR + NW   +  I +  +     L D+V Q  R
Sbjct: 338 TRLDDNWNKYIPAILYYNYTVDRDLQDEVSQKIR 371


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +1

Query: 376 LNLVASTIPRLS 411
           LNLVA T+P++S
Sbjct: 257 LNLVAETLPQVS 268


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +1

Query: 376 LNLVASTIPRLS 411
           LNLVA T+P++S
Sbjct: 257 LNLVAETLPQVS 268


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +1

Query: 376 LNLVASTIPRLS 411
           LNLVA T+P++S
Sbjct: 257 LNLVAETLPQVS 268


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 11/40 (27%), Positives = 16/40 (40%)
 Frame = +3

Query: 441 SLLTGKYESSTASALVA*VTITKFP*VCDVGIIWVYLMSD 560
           SL  G Y  S A      + +  +  VC++   W Y   D
Sbjct: 277 SLYAGTYGGSDAGPYTREMGVIGYNEVCELYSDWDYFWDD 316


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,202
Number of Sequences: 336
Number of extensions: 3374
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)