Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_E13
(562 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X79239-1|CAA55821.1| 151|Homo sapiens ribosomal protein S13 pro... 164 2e-40
L01124-1|AAA60283.1| 151|Homo sapiens ribosomal protein S13 pro... 164 2e-40
D88010-1|BAA13528.1| 151|Homo sapiens ribosomal protein S13 pro... 164 2e-40
BC100032-1|AAI00033.1| 151|Homo sapiens ribosomal protein S13 p... 164 2e-40
BC066322-1|AAH66322.1| 151|Homo sapiens ribosomal protein S13 p... 164 2e-40
BC029732-1|AAH29732.1| 151|Homo sapiens ribosomal protein S13 p... 164 2e-40
BC006772-1|AAH06772.1| 151|Homo sapiens ribosomal protein S13 p... 164 2e-40
BC000475-1|AAH00475.1| 151|Homo sapiens ribosomal protein S13 p... 164 2e-40
L05090-1|AAC15854.1| 116|Homo sapiens ribosomal protein S13 pro... 154 2e-37
AE006466-6|AAK61271.1| 275|Homo sapiens tryptase I protein. 31 2.8
U47004-2|AAB19039.1| 1690|Homo sapiens collagen type IV a6 chain... 29 8.5
U47004-1|AAB19038.1| 1691|Homo sapiens collagen type IV a6 chain... 29 8.5
U04845-1|AAA19569.2| 1691|Homo sapiens A type IV collagen protein. 29 8.5
L22763-1|AAA16338.1| 542|Homo sapiens alpha-6 type IV collagen ... 29 8.5
D63562-1|BAA09791.1| 1600|Homo sapiens a6(IV) collagen protein. 29 8.5
D21337-1|BAA04809.1| 1678|Homo sapiens collagen protein. 29 8.5
AL136080-2|CAI40758.1| 1691|Homo sapiens collagen type IV alpha ... 29 8.5
AL136080-1|CAI40756.1| 1690|Homo sapiens collagen type IV alpha ... 29 8.5
AL109943-2|CAI42995.1| 1691|Homo sapiens collagen type IV alpha ... 29 8.5
AL109943-1|CAI42993.1| 1690|Homo sapiens collagen type IV alpha ... 29 8.5
AL034369-3|CAI42047.1| 1691|Homo sapiens collagen type IV alpha ... 29 8.5
AL034369-2|CAI42045.1| 1690|Homo sapiens collagen type IV alpha ... 29 8.5
AL031177-13|CAI43140.1| 1691|Homo sapiens collagen type IV alpha... 29 8.5
AL031177-12|CAI43139.1| 1690|Homo sapiens collagen type IV alpha... 29 8.5
>X79239-1|CAA55821.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 164 bits (399), Expect = 2e-40
Identities = 88/131 (67%), Positives = 100/131 (76%)
Frame = +3
Query: 99 PTWVKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILRIMKAMGLAP 278
PTW+KLT+DDVKEQI+KL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILRI+K+ GLAP
Sbjct: 23 PTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILRILKSKGLAP 82
Query: 279 DLPEDLYYLIQKAVAMRKPLERNRKDQGPPIPVESCCIHDSPA*LVIYKD*ELCSLLTGK 458
DLPEDLY+LI+KAVA+RK LERNRKD+ + I L Y + K
Sbjct: 83 DLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRL--ILIESRIHRLARYYKTKRVLPPNWK 140
Query: 459 YESSTASALVA 491
YESSTASALVA
Sbjct: 141 YESSTASALVA 151
Score = 46.0 bits (104), Expect = 9e-05
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +1
Query: 34 MGRMHAPGKGISQSALAYRRSV 99
MGRMHAPGKG+SQSAL YRRSV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSV 22
>L01124-1|AAA60283.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 164 bits (399), Expect = 2e-40
Identities = 88/131 (67%), Positives = 100/131 (76%)
Frame = +3
Query: 99 PTWVKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILRIMKAMGLAP 278
PTW+KLT+DDVKEQI+KL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILRI+K+ GLAP
Sbjct: 23 PTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILRILKSKGLAP 82
Query: 279 DLPEDLYYLIQKAVAMRKPLERNRKDQGPPIPVESCCIHDSPA*LVIYKD*ELCSLLTGK 458
DLPEDLY+LI+KAVA+RK LERNRKD+ + I L Y + K
Sbjct: 83 DLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRL--ILIESRIHRLARYYKTKRVLPPNWK 140
Query: 459 YESSTASALVA 491
YESSTASALVA
Sbjct: 141 YESSTASALVA 151
Score = 46.0 bits (104), Expect = 9e-05
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +1
Query: 34 MGRMHAPGKGISQSALAYRRSV 99
MGRMHAPGKG+SQSAL YRRSV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSV 22
>D88010-1|BAA13528.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 164 bits (399), Expect = 2e-40
Identities = 88/131 (67%), Positives = 100/131 (76%)
Frame = +3
Query: 99 PTWVKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILRIMKAMGLAP 278
PTW+KLT+DDVKEQI+KL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILRI+K+ GLAP
Sbjct: 23 PTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILRILKSKGLAP 82
Query: 279 DLPEDLYYLIQKAVAMRKPLERNRKDQGPPIPVESCCIHDSPA*LVIYKD*ELCSLLTGK 458
DLPEDLY+LI+KAVA+RK LERNRKD+ + I L Y + K
Sbjct: 83 DLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRL--ILIESRIHRLARYYKTKRVLPPNWK 140
Query: 459 YESSTASALVA 491
YESSTASALVA
Sbjct: 141 YESSTASALVA 151
Score = 46.0 bits (104), Expect = 9e-05
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +1
Query: 34 MGRMHAPGKGISQSALAYRRSV 99
MGRMHAPGKG+SQSAL YRRSV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSV 22
>BC100032-1|AAI00033.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 164 bits (399), Expect = 2e-40
Identities = 88/131 (67%), Positives = 100/131 (76%)
Frame = +3
Query: 99 PTWVKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILRIMKAMGLAP 278
PTW+KLT+DDVKEQI+KL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILRI+K+ GLAP
Sbjct: 23 PTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILRILKSKGLAP 82
Query: 279 DLPEDLYYLIQKAVAMRKPLERNRKDQGPPIPVESCCIHDSPA*LVIYKD*ELCSLLTGK 458
DLPEDLY+LI+KAVA+RK LERNRKD+ + I L Y + K
Sbjct: 83 DLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRL--ILIESRIHRLARYYKTKRVLPPNWK 140
Query: 459 YESSTASALVA 491
YESSTASALVA
Sbjct: 141 YESSTASALVA 151
Score = 46.0 bits (104), Expect = 9e-05
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +1
Query: 34 MGRMHAPGKGISQSALAYRRSV 99
MGRMHAPGKG+SQSAL YRRSV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSV 22
>BC066322-1|AAH66322.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 164 bits (399), Expect = 2e-40
Identities = 88/131 (67%), Positives = 100/131 (76%)
Frame = +3
Query: 99 PTWVKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILRIMKAMGLAP 278
PTW+KLT+DDVKEQI+KL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILRI+K+ GLAP
Sbjct: 23 PTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILRILKSKGLAP 82
Query: 279 DLPEDLYYLIQKAVAMRKPLERNRKDQGPPIPVESCCIHDSPA*LVIYKD*ELCSLLTGK 458
DLPEDLY+LI+KAVA+RK LERNRKD+ + I L Y + K
Sbjct: 83 DLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRL--ILIESRIHRLARYYKTKRVLPPNWK 140
Query: 459 YESSTASALVA 491
YESSTASALVA
Sbjct: 141 YESSTASALVA 151
Score = 46.0 bits (104), Expect = 9e-05
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +1
Query: 34 MGRMHAPGKGISQSALAYRRSV 99
MGRMHAPGKG+SQSAL YRRSV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSV 22
>BC029732-1|AAH29732.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 164 bits (399), Expect = 2e-40
Identities = 88/131 (67%), Positives = 100/131 (76%)
Frame = +3
Query: 99 PTWVKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILRIMKAMGLAP 278
PTW+KLT+DDVKEQI+KL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILRI+K+ GLAP
Sbjct: 23 PTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILRILKSKGLAP 82
Query: 279 DLPEDLYYLIQKAVAMRKPLERNRKDQGPPIPVESCCIHDSPA*LVIYKD*ELCSLLTGK 458
DLPEDLY+LI+KAVA+RK LERNRKD+ + I L Y + K
Sbjct: 83 DLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRL--ILIESRIHRLARYYKTKRVLPPNWK 140
Query: 459 YESSTASALVA 491
YESSTASALVA
Sbjct: 141 YESSTASALVA 151
Score = 46.0 bits (104), Expect = 9e-05
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +1
Query: 34 MGRMHAPGKGISQSALAYRRSV 99
MGRMHAPGKG+SQSAL YRRSV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSV 22
>BC006772-1|AAH06772.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 164 bits (399), Expect = 2e-40
Identities = 88/131 (67%), Positives = 100/131 (76%)
Frame = +3
Query: 99 PTWVKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILRIMKAMGLAP 278
PTW+KLT+DDVKEQI+KL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILRI+K+ GLAP
Sbjct: 23 PTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILRILKSKGLAP 82
Query: 279 DLPEDLYYLIQKAVAMRKPLERNRKDQGPPIPVESCCIHDSPA*LVIYKD*ELCSLLTGK 458
DLPEDLY+LI+KAVA+RK LERNRKD+ + I L Y + K
Sbjct: 83 DLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRL--ILIESRIHRLARYYKTKRVLPPNWK 140
Query: 459 YESSTASALVA 491
YESSTASALVA
Sbjct: 141 YESSTASALVA 151
Score = 46.0 bits (104), Expect = 9e-05
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +1
Query: 34 MGRMHAPGKGISQSALAYRRSV 99
MGRMHAPGKG+SQSAL YRRSV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSV 22
>BC000475-1|AAH00475.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 164 bits (399), Expect = 2e-40
Identities = 88/131 (67%), Positives = 100/131 (76%)
Frame = +3
Query: 99 PTWVKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILRIMKAMGLAP 278
PTW+KLT+DDVKEQI+KL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILRI+K+ GLAP
Sbjct: 23 PTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILRILKSKGLAP 82
Query: 279 DLPEDLYYLIQKAVAMRKPLERNRKDQGPPIPVESCCIHDSPA*LVIYKD*ELCSLLTGK 458
DLPEDLY+LI+KAVA+RK LERNRKD+ + I L Y + K
Sbjct: 83 DLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRL--ILIESRIHRLARYYKTKRVLPPNWK 140
Query: 459 YESSTASALVA 491
YESSTASALVA
Sbjct: 141 YESSTASALVA 151
Score = 46.0 bits (104), Expect = 9e-05
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +1
Query: 34 MGRMHAPGKGISQSALAYRRSV 99
MGRMHAPGKG+SQSAL YRRSV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSV 22
>L05090-1|AAC15854.1| 116|Homo sapiens ribosomal protein S13
protein.
Length = 116
Score = 154 bits (373), Expect = 2e-37
Identities = 72/87 (82%), Positives = 82/87 (94%)
Frame = +3
Query: 99 PTWVKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILRIMKAMGLAP 278
PTW+KLT+DDVKEQI+KL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILRI+K+ GLA
Sbjct: 12 PTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILRILKSKGLAS 71
Query: 279 DLPEDLYYLIQKAVAMRKPLERNRKDQ 359
DLPEDLY+LI+KAVA+RK LERNRKD+
Sbjct: 72 DLPEDLYHLIKKAVAVRKHLERNRKDK 98
>AE006466-6|AAK61271.1| 275|Homo sapiens tryptase I protein.
Length = 275
Score = 31.1 bits (67), Expect = 2.8
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = -1
Query: 106 QVGHCGGTPAPTGIYPCQV--RAYDPYWRLF 20
+VG GG AP +P QV R +DPYW F
Sbjct: 28 RVGIVGGQEAPRSKWPWQVSLRVHDPYWMHF 58
>U47004-2|AAB19039.1| 1690|Homo sapiens collagen type IV a6 chain
protein.
Length = 1690
Score = 29.5 bits (63), Expect = 8.5
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = -2
Query: 414 RAKPGNRGCNKIQPELAVPGPSYYVPKVSSWRQPSGSGSTNLPV 283
R PG GCN Q + PGP Y + P GS PV
Sbjct: 117 RGPPGLDGCNGTQGAVGFPGPDGYPGLLGPPGLPGQKGSKGDPV 160
>U47004-1|AAB19038.1| 1691|Homo sapiens collagen type IV a6 chain
protein.
Length = 1691
Score = 29.5 bits (63), Expect = 8.5
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = -2
Query: 414 RAKPGNRGCNKIQPELAVPGPSYYVPKVSSWRQPSGSGSTNLPV 283
R PG GCN Q + PGP Y + P GS PV
Sbjct: 118 RGPPGLDGCNGTQGAVGFPGPDGYPGLLGPPGLPGQKGSKGDPV 161
>U04845-1|AAA19569.2| 1691|Homo sapiens A type IV collagen protein.
Length = 1691
Score = 29.5 bits (63), Expect = 8.5
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = -2
Query: 414 RAKPGNRGCNKIQPELAVPGPSYYVPKVSSWRQPSGSGSTNLPV 283
R PG GCN Q + PGP Y + P GS PV
Sbjct: 118 RGPPGLDGCNGTQGAVGFPGPDGYPGLLGPPGLPGQKGSKGDPV 161
>L22763-1|AAA16338.1| 542|Homo sapiens alpha-6 type IV collagen
protein.
Length = 542
Score = 29.5 bits (63), Expect = 8.5
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = -2
Query: 414 RAKPGNRGCNKIQPELAVPGPSYYVPKVSSWRQPSGSGSTNLPV 283
R PG GCN Q + PGP Y + P GS PV
Sbjct: 118 RGPPGLDGCNGTQGAVGFPGPDGYPGLLGPPGLPGQKGSKGDPV 161
>D63562-1|BAA09791.1| 1600|Homo sapiens a6(IV) collagen protein.
Length = 1600
Score = 29.5 bits (63), Expect = 8.5
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = -2
Query: 414 RAKPGNRGCNKIQPELAVPGPSYYVPKVSSWRQPSGSGSTNLPV 283
R PG GCN Q + PGP Y + P GS PV
Sbjct: 113 RGPPGLDGCNGTQGAVGFPGPDGYPGLLGPPGLPGQKGSKGDPV 156
>D21337-1|BAA04809.1| 1678|Homo sapiens collagen protein.
Length = 1678
Score = 29.5 bits (63), Expect = 8.5
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = -2
Query: 414 RAKPGNRGCNKIQPELAVPGPSYYVPKVSSWRQPSGSGSTNLPV 283
R PG GCN Q + PGP Y + P GS PV
Sbjct: 117 RGPPGLDGCNGTQGAVGFPGPDGYPGLLGPPGLPGQKGSKGDPV 160
>AL136080-2|CAI40758.1| 1691|Homo sapiens collagen type IV alpha 6
protein.
Length = 1691
Score = 29.5 bits (63), Expect = 8.5
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = -2
Query: 414 RAKPGNRGCNKIQPELAVPGPSYYVPKVSSWRQPSGSGSTNLPV 283
R PG GCN Q + PGP Y + P GS PV
Sbjct: 118 RGPPGLDGCNGTQGAVGFPGPDGYPGLLGPPGLPGQKGSKGDPV 161
>AL136080-1|CAI40756.1| 1690|Homo sapiens collagen type IV alpha 6
protein.
Length = 1690
Score = 29.5 bits (63), Expect = 8.5
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = -2
Query: 414 RAKPGNRGCNKIQPELAVPGPSYYVPKVSSWRQPSGSGSTNLPV 283
R PG GCN Q + PGP Y + P GS PV
Sbjct: 117 RGPPGLDGCNGTQGAVGFPGPDGYPGLLGPPGLPGQKGSKGDPV 160
>AL109943-2|CAI42995.1| 1691|Homo sapiens collagen type IV alpha 6
protein.
Length = 1691
Score = 29.5 bits (63), Expect = 8.5
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = -2
Query: 414 RAKPGNRGCNKIQPELAVPGPSYYVPKVSSWRQPSGSGSTNLPV 283
R PG GCN Q + PGP Y + P GS PV
Sbjct: 118 RGPPGLDGCNGTQGAVGFPGPDGYPGLLGPPGLPGQKGSKGDPV 161
>AL109943-1|CAI42993.1| 1690|Homo sapiens collagen type IV alpha 6
protein.
Length = 1690
Score = 29.5 bits (63), Expect = 8.5
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = -2
Query: 414 RAKPGNRGCNKIQPELAVPGPSYYVPKVSSWRQPSGSGSTNLPV 283
R PG GCN Q + PGP Y + P GS PV
Sbjct: 117 RGPPGLDGCNGTQGAVGFPGPDGYPGLLGPPGLPGQKGSKGDPV 160
>AL034369-3|CAI42047.1| 1691|Homo sapiens collagen type IV alpha 6
protein.
Length = 1691
Score = 29.5 bits (63), Expect = 8.5
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = -2
Query: 414 RAKPGNRGCNKIQPELAVPGPSYYVPKVSSWRQPSGSGSTNLPV 283
R PG GCN Q + PGP Y + P GS PV
Sbjct: 118 RGPPGLDGCNGTQGAVGFPGPDGYPGLLGPPGLPGQKGSKGDPV 161
>AL034369-2|CAI42045.1| 1690|Homo sapiens collagen type IV alpha 6
protein.
Length = 1690
Score = 29.5 bits (63), Expect = 8.5
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = -2
Query: 414 RAKPGNRGCNKIQPELAVPGPSYYVPKVSSWRQPSGSGSTNLPV 283
R PG GCN Q + PGP Y + P GS PV
Sbjct: 117 RGPPGLDGCNGTQGAVGFPGPDGYPGLLGPPGLPGQKGSKGDPV 160
>AL031177-13|CAI43140.1| 1691|Homo sapiens collagen type IV alpha 6
protein.
Length = 1691
Score = 29.5 bits (63), Expect = 8.5
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = -2
Query: 414 RAKPGNRGCNKIQPELAVPGPSYYVPKVSSWRQPSGSGSTNLPV 283
R PG GCN Q + PGP Y + P GS PV
Sbjct: 118 RGPPGLDGCNGTQGAVGFPGPDGYPGLLGPPGLPGQKGSKGDPV 161
>AL031177-12|CAI43139.1| 1690|Homo sapiens collagen type IV alpha 6
protein.
Length = 1690
Score = 29.5 bits (63), Expect = 8.5
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = -2
Query: 414 RAKPGNRGCNKIQPELAVPGPSYYVPKVSSWRQPSGSGSTNLPV 283
R PG GCN Q + PGP Y + P GS PV
Sbjct: 117 RGPPGLDGCNGTQGAVGFPGPDGYPGLLGPPGLPGQKGSKGDPV 160
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,246,099
Number of Sequences: 237096
Number of extensions: 2263353
Number of successful extensions: 4670
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 4487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4662
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5646880600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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