Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_E13
         (562 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    23   1.6  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   2.8  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   2.8  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   6.4  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   6.4  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   6.4  
EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholi...    21   8.5  
EF127804-1|ABL67941.1|  461|Apis mellifera nicotinic acetylcholi...    21   8.5  
EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholi...    21   8.5  
DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholi...    21   8.5  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    21   8.5  

>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = +3

Query: 39  SYARTWQGYIPVGAGVPPQCPTWVKLTADDV 131
           +Y   W  ++P   G+P   P   K+ A  V
Sbjct: 572 TYCAFWNEFLPKLKGIPDPXPNTCKVIASSV 602


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +3

Query: 276 PDLPEDLYYLIQKAVAMRKPLERNRKDQG 362
           P +  + Y+ + K V  R  LER   D G
Sbjct: 251 PQIRGEFYFFLHKQVLNRYYLERLSNDMG 279


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +3

Query: 276 PDLPEDLYYLIQKAVAMRKPLERNRKDQG 362
           P +  + Y+ + K V  R  LER   D G
Sbjct: 251 PQIRGEFYFFLHKQVLNRYYLERLSNDMG 279


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +3

Query: 294 LYYLIQKAVAMRKPLERNRKDQG 362
           LYY + K +  R  LER   D G
Sbjct: 260 LYYFLHKQLMTRYFLERMSNDLG 282


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +3

Query: 294 LYYLIQKAVAMRKPLERNRKDQG 362
           LYY + K +  R  LER   D G
Sbjct: 260 LYYFLHKQLMTRYFLERMSNDLG 282


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -1

Query: 103 VGHCGGTPAPTG 68
           +GH G TP P G
Sbjct: 119 MGHMGHTPTPNG 130


>EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 6 protein.
          Length = 461

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +1

Query: 376 LNLVASTIPRLS 411
           LNLVA T+P++S
Sbjct: 240 LNLVAETLPQVS 251


>EF127804-1|ABL67941.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 5 protein.
          Length = 461

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +1

Query: 376 LNLVASTIPRLS 411
           LNLVA T+P++S
Sbjct: 240 LNLVAETLPQVS 251


>EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 4 protein.
          Length = 461

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +1

Query: 376 LNLVASTIPRLS 411
           LNLVA T+P++S
Sbjct: 240 LNLVAETLPQVS 251


>DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +1

Query: 376 LNLVASTIPRLS 411
           LNLVA T+P++S
Sbjct: 308 LNLVAETLPQVS 319


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -1

Query: 379 STGIGGPWSFLLRSKGFLMATAF 311
           STG+GGP S ++++   +  T +
Sbjct: 183 STGMGGPVSLVVQAMDPMNTTVY 205


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,066
Number of Sequences: 438
Number of extensions: 4352
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16195212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)