Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_E10
         (433 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    27   0.058
DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase rever...    21   3.8  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   3.8  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   5.0  

>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 27.5 bits (58), Expect = 0.058
 Identities = 18/64 (28%), Positives = 27/64 (42%)
 Frame = +2

Query: 131 NELPCIVIGGTCTAADTDCQTGRHITVKGLCPNQEEKGVECCHSVTKRTDTCRSHGGECM 310
           N L C++  G CT      + G   T+K  C   E+K  E  H V +     R +    +
Sbjct: 40  NYLDCVLDKGKCTKEAEKLKKGITETMKNGCVKCEQKQKEDVHKVFQHLMIHRPNWWHEL 99

Query: 311 ESTF 322
           E+ F
Sbjct: 100 ETKF 103


>DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 73

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 179 YRLRYMSRQSQYKVVH*KVNPL 114
           YRL   SRQ   K+V+ K N +
Sbjct: 5   YRLSLKSRQKAPKIVNSKYNSI 26


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 179 YRLRYMSRQSQYKVVH*KVNPL 114
           YRL   SRQ   K+V+ K N +
Sbjct: 5   YRLSLKSRQKAPKIVNSKYNSI 26


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -1

Query: 409 KITLFN*YTTFLIFTTINSF 350
           KI LF  YT   I TT+  F
Sbjct: 80  KIFLFAIYTNLSILTTVTIF 99



 Score = 20.2 bits (40), Expect = 8.8
 Identities = 10/33 (30%), Positives = 13/33 (39%)
 Frame = -1

Query: 277 SSLCNRMTTFYALFLLIWT*TFDSNMSTSLTVR 179
           S LC    TF     L+W      N + S  V+
Sbjct: 433 SKLCKLYATFLIALKLVWIVALFKNENLSEMVK 465


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,434
Number of Sequences: 336
Number of extensions: 2085
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9565283
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)