Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_E10
         (433 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   1.5  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   3.4  
AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter...    22   3.4  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    21   7.8  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    21   7.8  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    21   7.8  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    21   7.8  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +2

Query: 164 CTAADTDCQTGRHITVKG 217
           C    T C +G H++V G
Sbjct: 294 CVTTGTKCVSGEHLSVSG 311


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +2

Query: 143 CIVIGGTCTAADTDCQTG 196
           C ++   CT    DCQ G
Sbjct: 638 CNIMDAICTKLTADCQPG 655


>AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter
           transporter-1A protein.
          Length = 203

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 125 VNPLDRDPCIHWIY*SEEH 69
           VNP DRD    W+  ++ H
Sbjct: 111 VNPYDRDSLSCWLQMTKHH 129


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 168 PQPIRTVKLVDIL 206
           P PIR  K +D++
Sbjct: 453 PHPIRVAKTIDVI 465


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 168 PQPIRTVKLVDIL 206
           P PIR  K +D++
Sbjct: 439 PHPIRVAKTIDVI 451


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 168 PQPIRTVKLVDIL 206
           P PIR  K +D++
Sbjct: 473 PHPIRVAKTIDVI 485


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 168 PQPIRTVKLVDIL 206
           P PIR  K +D++
Sbjct: 422 PHPIRVAKTIDVI 434


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,446
Number of Sequences: 438
Number of extensions: 2315
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11244597
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)