Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_E09
(541 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_07_0294 - 29038259-29038420,29038526-29038632,29038889-290390... 32 0.34
08_02_1202 - 25253175-25253340,25255573-25255681,25256021-252561... 31 0.78
10_08_0103 + 14818893-14819082,14819878-14819934,14820948-148210... 30 1.0
08_02_0980 + 23255992-23256408,23256480-23256517,23256606-232566... 30 1.4
02_04_0220 - 21014225-21014386,21014492-21014572,21014739-210149... 30 1.4
08_01_1010 - 10215625-10216335,10216372-10216473 29 1.8
08_01_0500 + 4338111-4338195,4339910-4340042,4340116-4340187,434... 29 1.8
06_01_0350 + 2534422-2535615 29 1.8
01_06_0654 + 30911416-30912071,30913664-30914348 29 2.4
01_06_0451 - 29476892-29477516,29477600-29477843,29478313-294787... 29 2.4
03_06_0240 + 32584589-32585092 29 3.1
01_06_1607 + 38605100-38605364,38605415-38605722,38606213-38606977 28 5.5
08_02_0731 - 20483518-20484154,20484182-20484375,20484541-204846... 27 7.2
07_03_1546 + 27602598-27602917,27602995-27603052,27603130-276032... 27 7.2
04_04_0477 + 25517060-25517152,25517263-25517382,25518203-255185... 27 7.2
03_05_0992 + 29528126-29529931 27 7.2
01_06_1759 + 39689410-39689573,39689728-39689923,39690014-396901... 27 7.2
08_02_1243 - 25527523-25527960,25527993-25528604 27 9.6
06_03_0344 - 19754868-19754980,19756085-19756162,19756241-19756619 27 9.6
04_01_0022 + 324422-324445,324870-325265,325366-325546,325781-32... 27 9.6
03_06_0272 - 32775620-32776501 27 9.6
01_05_0048 - 17561963-17563585 27 9.6
>05_07_0294 -
29038259-29038420,29038526-29038632,29038889-29039093,
29039173-29039536,29039588-29039772,29039879-29040080,
29040697-29041589
Length = 705
Score = 31.9 bits (69), Expect = 0.34
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = -1
Query: 208 GSRGSCTPTSVAATPTLCTLGTKHRAPAGSYTDRAPLPPNRVSNETM 68
G G C S A++P L T + P+G AP PP R + +
Sbjct: 124 GGGGGCGGGSTASSPLTNALPTGNICPSGRVASAAPAPPRRARPDVL 170
>08_02_1202 -
25253175-25253340,25255573-25255681,25256021-25256123,
25256246-25256277,25257697-25258178,25258946-25259025,
25259107-25259165,25259341-25259413,25259526-25259660
Length = 412
Score = 30.7 bits (66), Expect = 0.78
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 55 KPLLSLFHYLLGWAEAVR-GRCNYRRAHGVSFQACRVSAW 171
+P ++ H L+ AEAVR R YR AHG +VS W
Sbjct: 178 EPYVAGHHLLVAHAEAVRLYRARYRAAHGGEVGITQVSHW 217
>10_08_0103 +
14818893-14819082,14819878-14819934,14820948-14821056,
14821137-14821362,14821521-14821637,14821735-14821893
Length = 285
Score = 30.3 bits (65), Expect = 1.0
Identities = 18/49 (36%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Frame = -2
Query: 246 PQSNSPP--GSVLEPDHAGVVRRRALPPRRHSARLERNTVRPPVVTPTA 106
P PP +V DHAG RR P R R + PP PTA
Sbjct: 4 PDPPPPPHLAAVAAMDHAGGELRRLRPSHRGGRRYKEKKASPPPSLPTA 52
>08_02_0980 +
23255992-23256408,23256480-23256517,23256606-23256654,
23256787-23256848,23256876-23256938,23256939-23257599
Length = 429
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = -2
Query: 291 ELALGHLRYSLTDVPPQSNSPPGSVLEPD---HAGVVRRRALPPRRHSA 154
EL G + + D PP P L HAG RRR PPRR S+
Sbjct: 327 ELVAGAVSITTQDPPPSMRPCPTLELAGGRVLHAGARRRRPRPPRRSSS 375
>02_04_0220 -
21014225-21014386,21014492-21014572,21014739-21014938,
21014999-21015157,21015248-21015377,21015520-21015673,
21015785-21015867,21015981-21016040,21016131-21016217
Length = 371
Score = 29.9 bits (64), Expect = 1.4
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +3
Query: 150 SVQSVGVAATLVGVQLPRDPVR--GHCQAGSLTGAVHLSKNNAGVLRPAQRGQKPRVEQK 323
+ + +G A +GV + VR GH +T A KNNAG L+ Q Q+ Q
Sbjct: 189 AAKELGKKAMYLGVPFLAEWVRNKGHLWRSQITAAKEDKKNNAGALQLLQL-QEEACRQS 247
Query: 324 GKSWL 338
GK L
Sbjct: 248 GKDGL 252
>08_01_1010 - 10215625-10216335,10216372-10216473
Length = 270
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = -1
Query: 217 PRTGSRGSCTPTSVAATPTLCTLGTKHRAPAGSYTDRAPLPPNRVSN 77
P T R + +P +TPT T RA + YT P PP R ++
Sbjct: 75 PSTPPRRAASPDYTPSTPT-----TPRRAASPDYTPSTPTPPRRAAS 116
Score = 27.9 bits (59), Expect = 5.5
Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 4/64 (6%)
Frame = -1
Query: 256 RCTAPVKLPAWQCPRTGSR----GSCTPTSVAATPTLCTLGTKHRAPAGSYTDRAPLPPN 89
R +P P+ PR S + TP AA+P + A + YT P PP
Sbjct: 113 RAASPDYTPSTPPPRAASPDYTPSTPTPPRRAASPNYTPSTPQRHAASPDYTPSTPTPPR 172
Query: 88 RVSN 77
R ++
Sbjct: 173 RAAS 176
>08_01_0500 +
4338111-4338195,4339910-4340042,4340116-4340187,
4340524-4340587,4341383-4341459,4341586-4341657,
4341741-4341853,4341995-4342126,4342204-4342545,
4342628-4343022,4343293-4343603,4343967-4344066
Length = 631
Score = 29.5 bits (63), Expect = 1.8
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -1
Query: 223 QCPRTGSRGSCTPTSVAATPTLCTLGTKHRAP-AGSYTDRAPL-PPNRVSN 77
+ P TGS TP S A P+LC GT P A ++ P PP V +
Sbjct: 154 EVPSTGSFSLFTPISFANNPSLCGPGTTKPCPGAPPFSPPPPYNPPTPVQS 204
>06_01_0350 + 2534422-2535615
Length = 397
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -2
Query: 210 PDHAGVVRRRAL-PPRRHSARLERNTVRPPV 121
P H VR RA+ P R SARLER + PP+
Sbjct: 28 PSHGDRVRLRAVCRPWRSSARLERKLLPPPL 58
>01_06_0654 + 30911416-30912071,30913664-30914348
Length = 446
Score = 29.1 bits (62), Expect = 2.4
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = -1
Query: 241 VKLPAWQCPRTGSRGSCTPTSVAATPTLCTLGTKHRAPAGSYTDRAPLP 95
+KLP+ P +G+ G TS P CTL + AGS++ A LP
Sbjct: 16 LKLPSVPRPSSGAAGVHPSTS----PCFCTLHLQDHPSAGSHSRTAQLP 60
>01_06_0451 -
29476892-29477516,29477600-29477843,29478313-29478714,
29481164-29481358,29481418-29481537,29481615-29481683,
29481901-29481999,29483857-29483946,29484049-29484180,
29485062-29485173
Length = 695
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 10/61 (16%)
Frame = -2
Query: 252 VPPQSNSPPGSVLEPDHAGVVRRR-----ALPPRRHSARLERNTVRP-----PVVTPTAH 103
+P + G P ++ + R+ A PP++HS+ L + RP PV++PT H
Sbjct: 159 LPVNNTRVKGPAYSPSNSPSIHRKHGIPVAAPPKQHSSNLPPSHHRPHKGSFPVISPTPH 218
Query: 102 R 100
+
Sbjct: 219 K 219
>03_06_0240 + 32584589-32585092
Length = 167
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = -1
Query: 244 PVKLPAWQCPRTGSRGSCTPTSVAATPTLCTLGTKHRAPAGSYTDRAPLPPN 89
PV +PA+ P +G+ P L TLG R A S + P P+
Sbjct: 88 PVMMPAYDAPAMVEQGAAAACGAGGDPLLLTLG--QRQAAASAPAQPPAVPS 137
>01_06_1607 + 38605100-38605364,38605415-38605722,38606213-38606977
Length = 445
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -2
Query: 243 QSNSPPGSVLEPDHAGVVRRRALPPRRHSARLERNTVRP 127
+ SPP V DHA +V +A PR H + + + +P
Sbjct: 257 ECTSPPAIVT--DHAAMVAHKAPSPRHHQQQQQLHAAKP 293
>08_02_0731 -
20483518-20484154,20484182-20484375,20484541-20484640,
20485282-20485622
Length = 423
Score = 27.5 bits (58), Expect = 7.2
Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 3/59 (5%)
Frame = -2
Query: 291 ELALGHLRYSLTDVPPQSNSPPGSVLEPD---HAGVVRRRALPPRRHSARLERNTVRPP 124
+L G + ++ D PP P L HAG RR+ PPR+ S PP
Sbjct: 308 KLVAGAVSVTMQDPPPSMRPCPMPELASGRVLHAGARRRQPRPPRQSSVAAVAVASAPP 366
>07_03_1546 + 27602598-27602917,27602995-27603052,27603130-27603252,
27603896-27603992,27604095-27604131,27604244-27604349,
27604547-27604604,27604705-27604802,27604911-27605030,
27605622-27605667,27606336-27606522,27606747-27607263,
27607361-27607453,27608101-27608286,27608364-27608574,
27609263-27609387,27609518-27609664,27610114-27610236,
27610445-27610799,27611076-27611305,27611785-27611877
Length = 1109
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -2
Query: 246 PQSNSPPGSVLEPDHAGVVRRRALPPRRHSARLERNTVRPPVVTPTA 106
P +N+P + ++ G V+R L P + S+ + PVV P A
Sbjct: 942 PVANNPTSRFMPSNNPGFVQRPGLSPVQPSSPTQAQGQPQPVVAPPA 988
>04_04_0477 +
25517060-25517152,25517263-25517382,25518203-25518506,
25518944-25519305,25519401-25519575,25520510-25520574,
25520725-25520790,25521275-25521350,25521813-25521922
Length = 456
Score = 27.5 bits (58), Expect = 7.2
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +2
Query: 116 VTTGGRTVFRSKRAECRRGGNARR-RTTPA*SGSRTLPGGEFD 241
+ GR + +R + RGG ARR R PA SR GG +D
Sbjct: 399 IELNGRLIHVEERRQIYRGGGARRGRGRPA-DFSRGQSGGRYD 440
>03_05_0992 + 29528126-29529931
Length = 601
Score = 27.5 bits (58), Expect = 7.2
Identities = 27/85 (31%), Positives = 31/85 (36%)
Frame = -2
Query: 381 GRAFAVPMRTEHLDQASFCPFAPREVSVLAELALGHLRYSLTDVPPQSNSPPGSVLEPDH 202
G A A+ + H S P P S LA LA R S P P +L P
Sbjct: 73 GAASALALHFFHWCSPSLPPPGPLPSS-LALLAKSFSRASSAPSPSLLAPLPAQLLSPSL 131
Query: 201 AGVVRRRALPPRRHSARLERNTVRP 127
V RR PPR L + RP
Sbjct: 132 LSPVLRRLPPPRLLPFALSLLSARP 156
>01_06_1759 +
39689410-39689573,39689728-39689923,39690014-39690103,
39690221-39690277,39690391-39690460,39690747-39690811,
39691408-39691462,39691704-39691831,39691919-39691950,
39692205-39692274,39692723-39692824,39692921-39693010,
39693084-39693232,39693620-39693731,39695332-39695412,
39695481-39695705,39695815-39695937,39696021-39696137
Length = 641
Score = 27.5 bits (58), Expect = 7.2
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -2
Query: 285 ALGHLRYSLTDVPPQSNSPPGSVLEP 208
ALGH+ L + P ++ PP ++P
Sbjct: 494 ALGHIELDLPEAPEKAPKPPAQAVDP 519
>08_02_1243 - 25527523-25527960,25527993-25528604
Length = 349
Score = 27.1 bits (57), Expect = 9.6
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -1
Query: 193 CTPTSVAATPTLCTL-GTKHRAPAGSYTDRAPLP 95
CTP+S A PT+C+ T+ AP GS +P P
Sbjct: 88 CTPSSRGA-PTMCSSPPTQSAAPPGSRCSPSPSP 120
>06_03_0344 - 19754868-19754980,19756085-19756162,19756241-19756619
Length = 189
Score = 27.1 bits (57), Expect = 9.6
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -2
Query: 258 TDVPPQSNSPPGSVLEPDHAG-VVRRRALPPRRHSARLERNTVRP 127
+D+ P NSPPG P V R L P ++S+ +R+T P
Sbjct: 12 SDLSPPKNSPPGDRDTPTPGSRPVDRSDLSPPKNSSLGDRDTSTP 56
>04_01_0022 +
324422-324445,324870-325265,325366-325546,325781-326072,
326389-326461,326610-326700,326815-326894,326992-327234
Length = 459
Score = 27.1 bits (57), Expect = 9.6
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
Frame = -1
Query: 217 PRTGSRGSCTPTSVAA----TPTLCTLGTKHRAPAGSYTDRA 104
P + S PT AA TPT L TK PAGS + R+
Sbjct: 35 PPAAASMSPAPTQAAADITPTPTTSILSTKASTPAGSCSSRS 76
>03_06_0272 - 32775620-32776501
Length = 293
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +2
Query: 104 CAVGVTTGGRTVFRSKRAECRRGGNARRRTTP 199
C + T+ R R K AE RGG +RR P
Sbjct: 187 CGLNETSRRRRRRREKLAEATRGGGEKRREEP 218
>01_05_0048 - 17561963-17563585
Length = 540
Score = 27.1 bits (57), Expect = 9.6
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = -1
Query: 172 ATPTLCTLGTKHRAPAGSYTDRAPLPPNRVSNETMKVV 59
AT LC+ + H A D PLPP S T +V
Sbjct: 8 ATHLLCSARSAHAGNAPRVLDEMPLPPLAPSRRTTTLV 45
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,872,757
Number of Sequences: 37544
Number of extensions: 402565
Number of successful extensions: 1518
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1518
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1198356516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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