Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_E08
(538 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0257 + 11145558-11145876,11148181-11148347,11149114-111493... 196 1e-50
03_05_0228 - 22137771-22138016,22138109-22138306,22138852-221390... 196 1e-50
06_02_0082 + 11536799-11537554,11538210-11538334,11538507-11538687 31 0.002
01_03_0282 - 14580875-14580891,14582126-14585855 30 1.0
06_01_1033 - 8080179-8080685 30 1.3
04_03_0563 - 17195605-17196681 29 1.8
01_06_1684 + 39151412-39151702,39152410-39152548,39152926-391530... 29 2.3
03_06_0682 - 35516081-35518303 28 4.1
03_06_0680 - 35497868-35497884,35498058-35501961 28 4.1
01_03_0284 - 14595643-14595663,14595978-14596018,14596379-145967... 28 4.1
01_01_1084 - 8521796-8522389,8522503-8522983,8523084-8523190 28 5.4
09_06_0320 - 22297579-22297760,22298433-22299358,22299422-222997... 27 7.2
07_01_0763 + 5854986-5855000,5855266-5855775,5855899-5856159 27 7.2
07_01_0760 - 5844349-5844401,5844521-5844665,5844782-5845297,584... 27 7.2
06_03_1131 + 27872870-27872958,27873036-27873281,27874058-278741... 27 7.2
02_05_0182 + 26530799-26530852,26531677-26532927,26533250-265333... 27 7.2
01_03_0278 - 14509481-14509506,14510700-14512291,14512547-145126... 27 7.2
05_03_0591 + 15892772-15893412,15893478-15893910 27 9.5
03_06_0678 - 35480711-35484658 27 9.5
01_05_0293 - 20532559-20532572,20532573-20532798,20532926-205339... 27 9.5
>05_03_0257 +
11145558-11145876,11148181-11148347,11149114-11149311,
11149405-11149650
Length = 309
Score = 196 bits (477), Expect = 1e-50
Identities = 89/161 (55%), Positives = 109/161 (67%)
Frame = +3
Query: 54 KKWSDVMRFLLRIRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGYVIFRIXXXXXXXX 233
+K SDVMRF+ R+R W+YRQ + R RPTRPDKARRLGY+AKQGYV++R+
Sbjct: 118 RKQSDVMRFVQRVRCWEYRQQPAIVRLTRPTRPDKARRLGYKAKQGYVVYRVRVRRGGRK 177
Query: 234 XXXXXXATYGKPKSHGVNQLKATRNLQSIAEEXXXXXXXXXXXXNSYWVAQDSSYKYFEV 413
YGKPK G+ QLK RN +S+AEE NSYWV +DS+YKYFE+
Sbjct: 178 RPVPKGIVYGKPKHQGITQLKFQRNKRSVAEERAGRKLGGLRVLNSYWVNEDSTYKYFEI 237
Query: 414 ILIDPSHKAIRRDPKINWIVNAVHKHREMRGLTSAGKSSRG 536
IL+D +H AIR DP+INW+ VHKHRE+RGLTSAGK RG
Sbjct: 238 ILVDVAHSAIRNDPRINWLCKPVHKHRELRGLTSAGKKYRG 278
>03_05_0228 -
22137771-22138016,22138109-22138306,22138852-22139018,
22139129-22139132
Length = 204
Score = 196 bits (477), Expect = 1e-50
Identities = 89/161 (55%), Positives = 109/161 (67%)
Frame = +3
Query: 54 KKWSDVMRFLLRIRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGYVIFRIXXXXXXXX 233
+K SDVMRF+ R+R W+YRQ + R RPTRPDKARRLGY+AKQGYV++R+
Sbjct: 13 RKQSDVMRFVQRVRCWEYRQQPAIVRLTRPTRPDKARRLGYKAKQGYVVYRVRVRRGGRK 72
Query: 234 XXXXXXATYGKPKSHGVNQLKATRNLQSIAEEXXXXXXXXXXXXNSYWVAQDSSYKYFEV 413
YGKPK G+ QLK RN +S+AEE NSYWV +DS+YKYFE+
Sbjct: 73 RPVPKGIVYGKPKHQGITQLKFQRNKRSVAEERAGRKLGGLRVLNSYWVNEDSTYKYFEI 132
Query: 414 ILIDPSHKAIRRDPKINWIVNAVHKHREMRGLTSAGKSSRG 536
IL+D +H AIR DP+INW+ VHKHRE+RGLTSAGK RG
Sbjct: 133 ILVDVAHSAIRNDPRINWLCKPVHKHRELRGLTSAGKKYRG 173
>06_02_0082 + 11536799-11537554,11538210-11538334,11538507-11538687
Length = 353
Score = 31.1 bits (67), Expect(2) = 0.002
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +3
Query: 405 FEVILIDPSHKAIRRDPK 458
FE+IL+D +H AIR DPK
Sbjct: 299 FEIILVDVAHSAIRDDPK 316
Score = 27.5 bits (58), Expect(2) = 0.002
Identities = 14/44 (31%), Positives = 17/44 (38%)
Frame = +3
Query: 177 RAKQGYVIFRIXXXXXXXXXXXXXXATYGKPKSHGVNQLKATRN 308
R+ GYV+ Y KPK G+ QLK RN
Sbjct: 249 RSGTGYVVLPCPSRRGGRKRPVHKGIVYSKPKHQGITQLKFQRN 292
>01_03_0282 - 14580875-14580891,14582126-14585855
Length = 1248
Score = 30.3 bits (65), Expect = 1.0
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +2
Query: 8 LVKMGAYRYIQELYR--EKVERCYAISLAYKSVAISPVDSYAPRSQAHEARQGEKAWIPC 181
+VK A Y+ E Y+ E +E + I L K AI V S A +H RQG KAW+
Sbjct: 16 MVKEKASSYLLEQYKVMEGMEEQHEI-LKRKLPAILDVISDAEEQASH--RQGVKAWLEA 72
Query: 182 QARLCYLQN 208
++ Y N
Sbjct: 73 LKKVAYEAN 81
>06_01_1033 - 8080179-8080685
Length = 168
Score = 29.9 bits (64), Expect = 1.3
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
Frame = -3
Query: 260 VGSSLGHWAFTATTAHADSEDNITLLGTVSKPSRLVWPRGPG---SAVHTSQ-LAILPHS 93
+G+SLG W + + A E + L + R WP S V Q + PH
Sbjct: 89 IGASLGRWCYRSRRYDATYEGFVFPLRVTDELDR--WPEMAARRRSWVSPQQAMDRCPHW 146
Query: 92 YTQEKSHNIAPLFPYTTPV 36
+ +E A LFP TP+
Sbjct: 147 WMREALQRFADLFPQPTPL 165
>04_03_0563 - 17195605-17196681
Length = 358
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 121 VCTALPGPRGQTRREGLDTVPSKVMLSSESACAVVAV 231
V ALP PR T+P+ V++ S S C +V V
Sbjct: 147 VVEALPSPRIMAVHMPFSTLPASVVVDSSSGCKIVYV 183
>01_06_1684 +
39151412-39151702,39152410-39152548,39152926-39153040,
39153232-39153332,39153688-39153809,39153885-39153976,
39155288-39155393,39155477-39155631,39155904-39156031,
39156349-39156479,39157171-39157268,39157371-39158162,
39158472-39158523
Length = 773
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = -3
Query: 305 ASGFQLVDTMALGFAVGSSLGHWAFTATTAHADSEDNITLLGTVSKPSRLVWPR 144
AS +LV + GFA G++ A A AH DS+ ++ L + L W R
Sbjct: 55 ASAARLVASAVAGFAQGAAAAAIAAGAIGAHVDSDRDLRHLSRLRYKRWLWWTR 108
>03_06_0682 - 35516081-35518303
Length = 740
Score = 28.3 bits (60), Expect = 4.1
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +2
Query: 8 LVKMGAYRYIQELYR--EKVERCYAISLAYKSVAISPVDSYAPRSQAHEARQGEKAWIPC 181
+VK A Y+ E Y+ E +E + I L K AI V + A QA + R+G KAW+
Sbjct: 16 MVKEKASSYLMEQYKVMEGMEEQHKI-LKRKLPAILDVIADA-EEQAAKHREGAKAWLEE 73
Query: 182 QARLCYLQN 208
++ Y N
Sbjct: 74 LRKVAYQAN 82
>03_06_0680 - 35497868-35497884,35498058-35501961
Length = 1306
Score = 28.3 bits (60), Expect = 4.1
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +2
Query: 8 LVKMGAYRYIQELYR--EKVERCYAISLAYKSVAISPVDSYAPRSQAHEARQGEKAWIPC 181
+VK A Y+ E Y+ E +E + I L K AI V + A QA + R+G KAW+
Sbjct: 9 MVKDKASSYLLEQYKVMEGMEEQHEI-LKRKLPAILDVIADA-EEQAAKHREGVKAWLEA 66
Query: 182 QARLCYLQN 208
++ Y N
Sbjct: 67 LRKVAYQAN 75
>01_03_0284 -
14595643-14595663,14595978-14596018,14596379-14596732,
14597023-14597494,14597524-14600001
Length = 1121
Score = 28.3 bits (60), Expect = 4.1
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +2
Query: 8 LVKMGAYRYIQELYR--EKVERCYAISLAYKSVAISPVDSYAPRSQAHEARQGEKAWIPC 181
+VK A Y+++ Y+ E +E + I L K AI V + A +H R+G KAW+
Sbjct: 16 MVKEKASSYLRDKYKVMEGMEEQHEI-LKRKLPAILDVITDAEEQASH--REGAKAWLEA 72
Query: 182 QARLCYLQN 208
++ Y N
Sbjct: 73 LKKVAYEAN 81
>01_01_1084 - 8521796-8522389,8522503-8522983,8523084-8523190
Length = 393
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -3
Query: 290 LVDTMALGFAVGSSLGHWAFTATTAHADSEDNITLLGTVSKPSRLVWPRG 141
LV +G V S GHW ++ + AD+E +L + + +RL+ RG
Sbjct: 303 LVFHSRMGLCVQISRGHWLWSVWESIADAELAADILHSSATSTRLIPIRG 352
>09_06_0320 - 22297579-22297760,22298433-22299358,22299422-22299747,
22300591-22300660,22301632-22301726,22301917-22302048,
22302154-22302222,22302953-22303051,22303169-22303253,
22303353-22303453,22303660-22303728,22303861-22303901,
22304085-22304303,22304444-22304470,22304562-22304660,
22304898-22305106,22305382-22305485,22305753-22305894,
22305991-22306289,22306508-22306903
Length = 1229
Score = 27.5 bits (58), Expect = 7.2
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = +2
Query: 29 RYIQELYREKVERCYAISLAYKSVAISPVDSYAPRSQAHEARQGEKAWIPC---QARLCY 199
R ++++ + ER ISL Y S IS AP + + RQG +P Q R+ +
Sbjct: 1136 RRLKDVAQFGAERTLGISLVYISSMISEYLRTAPGIKGNLKRQGVVFTVPSHKKQTRMVH 1195
Query: 200 LQNP 211
L P
Sbjct: 1196 LSTP 1199
>07_01_0763 + 5854986-5855000,5855266-5855775,5855899-5856159
Length = 261
Score = 27.5 bits (58), Expect = 7.2
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = -3
Query: 287 VDTMALGFAVGSSLGHWAFTATTAHADSE--DNITLLGTVSKPSRLVWPRGPGSA 129
V M G G S+G + AH ++ DN+ L GT + W G GSA
Sbjct: 88 VKNMVCGPGHGISIGSLGDHNSEAHVNNVTVDNVRLYGTTNGARIKTWQGGKGSA 142
>07_01_0760 -
5844349-5844401,5844521-5844665,5844782-5845297,
5845405-5845596,5845686-5845817,5845926-5846069
Length = 393
Score = 27.5 bits (58), Expect = 7.2
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = -3
Query: 287 VDTMALGFAVGSSLGHWAFTATTAHADSE--DNITLLGTVSKPSRLVWPRGPGSA 129
V M G G S+G + AH ++ DN+ L GT + W G GSA
Sbjct: 241 VKNMVCGPGHGISIGSLGDHNSEAHVNNVTVDNVRLYGTANGARIKTWQGGKGSA 295
>06_03_1131 +
27872870-27872958,27873036-27873281,27874058-27874163,
27874665-27875209,27875455-27875914,27876234-27876319,
27877092-27877194
Length = 544
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 84 REIA*HRSTFSLYNSCIYLYAPIL 13
RE+A HR T ++ + C+YLY +L
Sbjct: 179 RELATHRRTGAIDSFCLYLYGIVL 202
>02_05_0182 +
26530799-26530852,26531677-26532927,26533250-26533335,
26533673-26533733
Length = 483
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 84 REIA*HRSTFSLYNSCIYLYAPIL 13
RE+A HR T ++ + C+YLY +L
Sbjct: 50 RELATHRRTGAIDSFCLYLYGIVL 73
>01_03_0278 -
14509481-14509506,14510700-14512291,14512547-14512638,
14513030-14514412
Length = 1030
Score = 27.5 bits (58), Expect = 7.2
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +2
Query: 8 LVKMGAYRYIQELYR--EKVERCYAISLAYKSVAISPVDSYAPRSQAHEARQGEKAWIPC 181
+VK Y+ + YR E +E + I L K AI V S A + QA E R+G KAW+
Sbjct: 16 MVKDKVSSYLLQEYRVMEGLEEQHKI-LKRKLPAILDVISDAEK-QASEQREGAKAWLEE 73
Query: 182 QARLCYLQN 208
+ Y N
Sbjct: 74 LKTVAYEAN 82
>05_03_0591 + 15892772-15893412,15893478-15893910
Length = 357
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +2
Query: 110 PVDSYAPRSQAHEARQGEKAWIPCQARLCYLQNPRAP 220
P+D R+ H A +G W P + + Q PR P
Sbjct: 108 PIDCRHGRALFHSAGEGLAVWDPMAGDVRWQQEPRIP 144
>03_06_0678 - 35480711-35484658
Length = 1315
Score = 27.1 bits (57), Expect = 9.5
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +2
Query: 8 LVKMGAYRYIQELYR--EKVERCYAISLAYKSVAISPVDSYAPRSQAHEARQGEKAWIPC 181
+VK A Y+ E Y+ E +E + I L K AI V + A QA + R+G KAW+
Sbjct: 9 MVKDKASSYLLEQYKVMEGMEEQHEI-LKRKLPAILDVIADA-EEQAAKHREGAKAWLEE 66
Query: 182 QARLCYLQN 208
++ Y N
Sbjct: 67 LRKVAYQAN 75
>01_05_0293 -
20532559-20532572,20532573-20532798,20532926-20533960,
20534670-20534996
Length = 533
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +3
Query: 111 QLTRMHRAPRPTRPD 155
QLTR+H P P RPD
Sbjct: 73 QLTRLHPPPEPPRPD 87
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,922,578
Number of Sequences: 37544
Number of extensions: 295941
Number of successful extensions: 849
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 847
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1186491600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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