Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_E06
(438 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 26 0.18
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 26 0.18
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 26 0.18
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 25 0.42
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 25 0.42
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 25 0.42
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 25 0.42
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 25 0.42
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 25 0.42
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 25 0.42
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 25 0.42
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 25 0.42
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 25 0.42
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 25 0.42
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 25 0.42
U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein. 23 1.3
DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein. 23 1.7
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 25.8 bits (54), Expect = 0.18
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = +1
Query: 331 THRLCCVWLLWLIPGH*LSVLVWN 402
+H+ +WL+WL+ +SV +W+
Sbjct: 214 SHQHAWIWLVWLLSQAWISVHIWS 237
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 25.8 bits (54), Expect = 0.18
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = +1
Query: 331 THRLCCVWLLWLIPGH*LSVLVWN 402
+H+ +WL+WL+ +SV +W+
Sbjct: 447 SHQHAWIWLVWLLSQAWISVHIWS 470
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 25.8 bits (54), Expect = 0.18
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = +1
Query: 331 THRLCCVWLLWLIPGH*LSVLVWN 402
+H+ +WL+WL+ +SV +W+
Sbjct: 447 SHQHAWIWLVWLLSQAWISVHIWS 470
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 24.6 bits (51), Expect = 0.42
Identities = 7/26 (26%), Positives = 16/26 (61%)
Frame = +1
Query: 331 THRLCCVWLLWLIPGH*LSVLVWNAR 408
+H+ +WLLWL+ +++ +W +
Sbjct: 460 SHQHAWIWLLWLLSQTWITLHIWTPK 485
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 24.6 bits (51), Expect = 0.42
Identities = 7/26 (26%), Positives = 16/26 (61%)
Frame = +1
Query: 331 THRLCCVWLLWLIPGH*LSVLVWNAR 408
+H+ +WLLWL+ +++ +W +
Sbjct: 460 SHQHAWIWLLWLLSQTWITLHIWTPK 485
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 24.6 bits (51), Expect = 0.42
Identities = 7/26 (26%), Positives = 16/26 (61%)
Frame = +1
Query: 331 THRLCCVWLLWLIPGH*LSVLVWNAR 408
+H+ +WLLWL+ +++ +W +
Sbjct: 460 SHQHAWIWLLWLLSQTWITLHIWTPK 485
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 24.6 bits (51), Expect = 0.42
Identities = 7/26 (26%), Positives = 16/26 (61%)
Frame = +1
Query: 331 THRLCCVWLLWLIPGH*LSVLVWNAR 408
+H+ +WLLWL+ +++ +W +
Sbjct: 460 SHQHAWIWLLWLLSQTWITLHIWTPK 485
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 24.6 bits (51), Expect = 0.42
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 217 LNSYRDIDIRRCSIGGGEEDYISSDGTDYY*QNRRS 324
++SY+ ++ G D SS GTDYY N S
Sbjct: 1 MSSYQFVNSLAQCYGQQARDQQSSPGTDYYNPNANS 36
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 24.6 bits (51), Expect = 0.42
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 217 LNSYRDIDIRRCSIGGGEEDYISSDGTDYY*QNRRS 324
++SY+ ++ G D SS GTDYY N S
Sbjct: 1 MSSYQFVNSLAQCYGQQARDQQSSPGTDYYNPNANS 36
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 24.6 bits (51), Expect = 0.42
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 217 LNSYRDIDIRRCSIGGGEEDYISSDGTDYY*QNRRS 324
++SY+ ++ G D SS GTDYY N S
Sbjct: 1 MSSYQFVNSLAQCYGQQARDQQSSPGTDYYNPNANS 36
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 24.6 bits (51), Expect = 0.42
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 217 LNSYRDIDIRRCSIGGGEEDYISSDGTDYY*QNRRS 324
++SY+ ++ G D SS GTDYY N S
Sbjct: 1 MSSYQFVNSLAQCYGQQARDQQSSPGTDYYNPNANS 36
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 24.6 bits (51), Expect = 0.42
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 217 LNSYRDIDIRRCSIGGGEEDYISSDGTDYY*QNRRS 324
++SY+ ++ G D SS GTDYY N S
Sbjct: 1 MSSYQFVNSLAQCYGQQARDQQSSPGTDYYNPNANS 36
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 24.6 bits (51), Expect = 0.42
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 217 LNSYRDIDIRRCSIGGGEEDYISSDGTDYY*QNRRS 324
++SY+ ++ G D SS GTDYY N S
Sbjct: 1 MSSYQFVNSLAQCYGQQARDQQSSPGTDYYNPNANS 36
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 24.6 bits (51), Expect = 0.42
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 217 LNSYRDIDIRRCSIGGGEEDYISSDGTDYY*QNRRS 324
++SY+ ++ G D SS GTDYY N S
Sbjct: 1 MSSYQFVNSLAQCYGQQARDQQSSPGTDYYNPNANS 36
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 24.6 bits (51), Expect = 0.42
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 217 LNSYRDIDIRRCSIGGGEEDYISSDGTDYY*QNRRS 324
++SY+ ++ G D SS GTDYY N S
Sbjct: 1 MSSYQFVNSLAQCYGQQARDQQSSPGTDYYNPNANS 36
>U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein.
Length = 425
Score = 23.0 bits (47), Expect = 1.3
Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = -1
Query: 267 STANTTPS-DVDIPIAVEPSLIAS 199
S T+P D +IP+A EP+ +AS
Sbjct: 74 SDGTTSPEPDPEIPVAPEPAPLAS 97
>DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein.
Length = 822
Score = 22.6 bits (46), Expect = 1.7
Identities = 10/28 (35%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Frame = -2
Query: 413 VILAFHT-STLN*CPGISHKSQTQHKRC 333
V+ +H S L PG+ H HK+C
Sbjct: 282 VLSGYHALSGLKAPPGVEHFEDVVHKKC 309
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,449
Number of Sequences: 336
Number of extensions: 1639
Number of successful extensions: 17
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 9775509
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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