Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_E05
         (417 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74033-5|CAF31473.1|  333|Caenorhabditis elegans Hypothetical pr...    31   0.25 
Z83105-8|CAB05488.1|  496|Caenorhabditis elegans Hypothetical pr...    27   7.2  
AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical...    26   9.5  

>Z74033-5|CAF31473.1|  333|Caenorhabditis elegans Hypothetical
           protein F38B7.7 protein.
          Length = 333

 Score = 31.5 bits (68), Expect = 0.25
 Identities = 10/24 (41%), Positives = 18/24 (75%)
 Frame = +2

Query: 14  CELFLNPYIILNETDTYLCLKTYH 85
           CELF+  ++IL  ++++LC+  YH
Sbjct: 143 CELFILSFLILGYSNSHLCISNYH 166


>Z83105-8|CAB05488.1|  496|Caenorhabditis elegans Hypothetical
           protein F14H3.8 protein.
          Length = 496

 Score = 26.6 bits (56), Expect = 7.2
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -3

Query: 172 GVIKIISLQSTYKVYIKRVDLSVE 101
           G+ +II  Q T  +YIKR+  SVE
Sbjct: 201 GIFEIIFSQKTQSLYIKRLPSSVE 224


>AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical
           protein Y59A8B.1a protein.
          Length = 1641

 Score = 26.2 bits (55), Expect = 9.5
 Identities = 10/39 (25%), Positives = 22/39 (56%)
 Frame = -2

Query: 416 NCHLTRSNQKYFTQFKPS*GPKHSTIGSESIPVEKSRQE 300
           N H + S+   +++++P  GPK   +     PV++ +Q+
Sbjct: 57  NGHTSSSHDNDYSEYRPRRGPKTPPLPPPDEPVKQQQQQ 95


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,784,004
Number of Sequences: 27780
Number of extensions: 170611
Number of successful extensions: 305
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 305
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 683806592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)