Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_E03
         (504 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subu...    25   0.51 
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   3.6  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   4.7  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   4.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   4.7  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   4.7  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    21   8.3  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   8.3  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   8.3  

>S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subunit
           protein.
          Length = 141

 Score = 24.6 bits (51), Expect = 0.51
 Identities = 14/56 (25%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = -2

Query: 458 IFLVPKAVAVMSWLSLW-KRFTLPAAVTLSPNPGMCVSVRLTPWPFTLSSATPAVA 294
           I++    + ++SW+S W  R   PA V L    G+   + +T    + ++A P ++
Sbjct: 74  IYIPSGLIVIISWVSFWLNRNATPARVAL----GVTTVLTMTTLMSSTNAALPKIS 125


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +1

Query: 385 AAGKVNLFHNDNHDITATAFGTRNMPDI 468
           AA K+N FH    D  +  F   ++PD+
Sbjct: 235 AASKLNSFHWHITDSHSFPFTAESLPDL 262


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = -2

Query: 410 WKRFTLPAAVTLSPNPGMCVSVRLTPWPFTLSSATPAVAAP 288
           W+   LP+  T SP P   + V   P P     A+P V  P
Sbjct: 67  WQVTPLPSDGTTSPEPDPEIPVAPEPAPL----ASPLVQEP 103


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +3

Query: 162 ARSSHAQLRWYLWCWS*STLCW 227
           AR  HA+     WC+     CW
Sbjct: 572 ARGIHAEALVPRWCYQNEGECW 593


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +2

Query: 14   TCSGRSSFYCLSLCASAFKADT*LSANLFTIFNTMRSLNY 133
            TC G S+   + +  +A  A +  S +  T +N   + NY
Sbjct: 1327 TCDGTSNVNVVDIVTTAKPAQSTTSVSTTTSWNPGSTTNY 1366


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -2

Query: 218  GTLTPAPEVPSELSVRAPCASL 153
            GT+ PA E+P E + +   A+L
Sbjct: 1587 GTIAPAREIPKEDTFQIILANL 1608


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
          protein protein.
          Length = 135

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 16 MFGKIVFLLLVALCV 60
          MF KI+  L+ A CV
Sbjct: 1  MFDKIILCLVYATCV 15


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 175 TLNSDGTSGAGVKVPFAGNDKN 240
           TL S G +  G+K+  + NDK+
Sbjct: 176 TLLSIGETAMGIKLNASDNDKD 197


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 175 TLNSDGTSGAGVKVPFAGNDKN 240
           TL S G +  G+K+  + NDK+
Sbjct: 176 TLLSIGETAMGIKLNASDNDKD 197


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,437
Number of Sequences: 336
Number of extensions: 2471
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11944578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)