Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_E01
         (239 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    24   0.64 
AF457546-1|AAL68776.1|  182|Anopheles gambiae 30 kDa protein pro...    23   1.5  
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    21   7.9  

>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 24.2 bits (50), Expect = 0.64
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -2

Query: 109 RHKGHCHSLSAAARGDLGRSWLSLW 35
           +H  HC  LS  +  +LGR+   LW
Sbjct: 59  KHHTHCTGLSRDSTRELGRNNQLLW 83


>AF457546-1|AAL68776.1|  182|Anopheles gambiae 30 kDa protein
           protein.
          Length = 182

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = +1

Query: 136 QSRQHGRDQKEDAGDEAGEGQCHGQG 213
           +S+    +  E+ G+E G+    G+G
Sbjct: 130 ESKDDAEEDSEEGGEEGGDSASGGEG 155


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 53  PAKVAASCCGQRVTVT 100
           PAK A    GQ++TV+
Sbjct: 330 PAKAAKQLVGQKLTVS 345


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 243,406
Number of Sequences: 2352
Number of extensions: 4351
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 53
effective length of database: 439,323
effective search space used: 11422398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)