BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_D22
(568 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 28 0.18
AY062205-1|AAL58566.1| 154|Anopheles gambiae cytochrome P450 CY... 26 0.99
AY545988-1|AAS99341.1| 423|Anopheles gambiae carboxypeptidase B... 25 1.7
AJ627286-1|CAF28572.1| 423|Anopheles gambiae carboxypeptidase B... 25 1.7
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 25 1.7
DQ989011-1|ABK97612.1| 467|Anopheles gambiae gustatory receptor... 24 4.0
AY062203-1|AAL58564.1| 149|Anopheles gambiae cytochrome P450 CY... 24 4.0
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 23 5.3
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 28.3 bits (60), Expect = 0.18
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3
Query: 242 SRPSAMSLAFCSTSIAGPALIIASLTLW 159
+RPS + +AF S SI P L S T W
Sbjct: 167 ARPSRIDVAFASPSICRPDLAANSATCW 194
>AY062205-1|AAL58566.1| 154|Anopheles gambiae cytochrome P450
CYP4C26 protein.
Length = 154
Score = 25.8 bits (54), Expect = 0.99
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +2
Query: 248 MKNDIHIL*Y*VPKGITCKQYHYKL*RNIYYFYNPKSWVTSNF 376
+ D+ + Y +P G T Y+L R+ F NP + NF
Sbjct: 82 LTEDVRVDNYTIPAGTTAMIVVYELHRDTSVFSNPDKFNPDNF 124
>AY545988-1|AAS99341.1| 423|Anopheles gambiae carboxypeptidase B
precursor protein.
Length = 423
Score = 25.0 bits (52), Expect = 1.7
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 142 ELEGVGQRVRDAIISA-GPAIDVLQKARDIADGRDSNEE*YTY 267
+L+ +G+R RDA+++A GP +V A DI + Y Y
Sbjct: 330 DLQRLGERARDALVAAGGPEYEVGNSA-DILYTASGATDDYAY 371
>AJ627286-1|CAF28572.1| 423|Anopheles gambiae carboxypeptidase B
protein.
Length = 423
Score = 25.0 bits (52), Expect = 1.7
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 142 ELEGVGQRVRDAIISA-GPAIDVLQKARDIADGRDSNEE*YTY 267
+L+ +G+R RDA+++A GP +V A DI + Y Y
Sbjct: 330 DLQRLGERARDALVAAGGPEYEVGNSA-DILYTASGATDDYAY 371
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 25.0 bits (52), Expect = 1.7
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -3
Query: 242 SRPSAMSLAFCSTSIAG 192
+RPS + +AF S+SIAG
Sbjct: 167 ARPSVVDVAFASSSIAG 183
>DQ989011-1|ABK97612.1| 467|Anopheles gambiae gustatory receptor 22
protein.
Length = 467
Score = 23.8 bits (49), Expect = 4.0
Identities = 18/75 (24%), Positives = 33/75 (44%)
Frame = -1
Query: 529 VIIRMVILTLVWHGFLLQVMTLYNITYSCPLFTFIDLIKIKLI*TNYKQLMEITGYPTFW 350
VI ++ ++++ FLL V + N + + K + K ++ YP W
Sbjct: 145 VIYNIIFMSIMVPHFLLPVASWRNGSEVAKFKNMWTDFQYKYLIVTGKPIVFPKLYPITW 204
Query: 349 IIEIIDISLKFVMIL 305
+ I+ SL V+IL
Sbjct: 205 TLCIVSWSLSLVIIL 219
>AY062203-1|AAL58564.1| 149|Anopheles gambiae cytochrome P450
CYP4C25 protein.
Length = 149
Score = 23.8 bits (49), Expect = 4.0
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +2
Query: 248 MKNDIHIL*Y*VPKGITCKQYHYKL*RNIYYFYNPKSWVTSNF 376
+ D+ I Y +P G T Y+L RN F NP + +F
Sbjct: 82 LTEDVDIDGYVLPAGTTAMIVVYQLHRNPEVFPNPDKFNPDHF 124
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 23.4 bits (48), Expect = 5.3
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -3
Query: 215 FCSTSIAGPALIIASLT 165
+CST GP LII +T
Sbjct: 60 YCSTECKGPRLIIERIT 76
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 527,981
Number of Sequences: 2352
Number of extensions: 10287
Number of successful extensions: 17
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53404389
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -