BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_D22
(568 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT016027-1|AAV36912.1| 897|Drosophila melanogaster RE07945p pro... 30 1.9
AE014297-2836|ABI31184.1| 897|Drosophila melanogaster CG31201-P... 30 1.9
BT016121-1|AAV37006.1| 2142|Drosophila melanogaster LD03265p pro... 28 7.7
AE014296-2600|AAF49564.4| 2142|Drosophila melanogaster CG5931-PA... 28 7.7
>BT016027-1|AAV36912.1| 897|Drosophila melanogaster RE07945p
protein.
Length = 897
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -3
Query: 545 GNKYDSYNKNGNINTGMARLFVT 477
GN Y SYNK+ N +TGM R +T
Sbjct: 474 GNDYGSYNKSTNESTGMLREIMT 496
>AE014297-2836|ABI31184.1| 897|Drosophila melanogaster CG31201-PB
protein.
Length = 897
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -3
Query: 545 GNKYDSYNKNGNINTGMARLFVT 477
GN Y SYNK+ N +TGM R +T
Sbjct: 474 GNDYGSYNKSTNESTGMLREIMT 496
>BT016121-1|AAV37006.1| 2142|Drosophila melanogaster LD03265p
protein.
Length = 2142
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 169 RDAIISAGPAIDVLQKARDIADGRDSNEE 255
+DA++S A DVL+ +D AD RD +
Sbjct: 282 KDAMVSQSKAADVLKILKDAADDRDCENQ 310
>AE014296-2600|AAF49564.4| 2142|Drosophila melanogaster CG5931-PA
protein.
Length = 2142
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 169 RDAIISAGPAIDVLQKARDIADGRDSNEE 255
+DA++S A DVL+ +D AD RD +
Sbjct: 282 KDAMVSQSKAADVLKILKDAADDRDCENQ 310
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,688,525
Number of Sequences: 53049
Number of extensions: 413550
Number of successful extensions: 821
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 821
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2213979693
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -