Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_D19
         (346 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   4.1  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   4.1  
AY739659-1|AAU85298.1|  288|Apis mellifera hyperpolarization-act...    21   5.4  
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    21   5.4  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    21   5.4  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    20   9.5  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    20   9.5  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           20   9.5  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    20   9.5  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +3

Query: 141 HVSVPTHAYNRKALRITVIGNYNSHQPTAEQIDALK 248
           H+++      + A+RI +   Y+SH    E  + LK
Sbjct: 503 HITINADKPMKAAIRIFIGPKYDSHHKLIEIPEDLK 538


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +3

Query: 141 HVSVPTHAYNRKALRITVIGNYNSHQPTAEQIDALK 248
           H+++      + A+RI +   Y+SH    E  + LK
Sbjct: 503 HITINADKPMKAAIRIFIGPKYDSHHKLIEIPEDLK 538


>AY739659-1|AAU85298.1|  288|Apis mellifera
           hyperpolarization-activated ion channelvariant T
           protein.
          Length = 288

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 164 RVSGHANVHPTGSFIYF 114
           + +GH  +HP  SF ++
Sbjct: 74  KAAGHWVIHPCSSFRFY 90


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 164 RVSGHANVHPTGSFIYF 114
           + +GH  +HP  SF ++
Sbjct: 74  KAAGHWVIHPCSSFRFY 90


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 164 RVSGHANVHPTGSFIYF 114
           + +GH  +HP  SF ++
Sbjct: 74  KAAGHWVIHPCSSFRFY 90


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 6/35 (17%), Positives = 16/35 (45%)
 Frame = -3

Query: 221 WLVGVVISYNRDSKSFPVVRVSGHANVHPTGSFIY 117
           W+  +  S  ++     ++  + +  + P GS +Y
Sbjct: 116 WMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLY 150


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 6/35 (17%), Positives = 16/35 (45%)
 Frame = -3

Query: 221 WLVGVVISYNRDSKSFPVVRVSGHANVHPTGSFIY 117
           W+  +  S  ++     ++  + +  + P GS +Y
Sbjct: 116 WMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLY 150


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 140 HPTGSFIYFCVSTN 99
           HP  SF  F VST+
Sbjct: 394 HPMSSFREFAVSTS 407


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 6/10 (60%), Positives = 10/10 (100%)
 Frame = +3

Query: 60  DTLKYWDIGS 89
           +TLKY+++GS
Sbjct: 306 NTLKYYEVGS 315


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,522
Number of Sequences: 438
Number of extensions: 2229
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  7812315
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)