Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_D18
         (464 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical pr...    34   0.058
AF022967-4|AAB69879.2|  117|Caenorhabditis elegans Hypothetical ...    29   2.2  
U41994-9|AAK31523.1|  786|Caenorhabditis elegans Hypothetical pr...    28   2.9  
U55369-1|AAK52175.1| 1247|Caenorhabditis elegans Cystic fibrosis...    27   5.0  
Z34801-6|CAA84329.1|  428|Caenorhabditis elegans Hypothetical pr...    27   6.6  
AL021487-9|CAE18007.1|  118|Caenorhabditis elegans Hypothetical ...    27   6.6  
U42835-2|AAA83586.1|  617|Caenorhabditis elegans Chitinase prote...    27   8.8  

>Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical protein
            K03H1.5 protein.
          Length = 1385

 Score = 33.9 bits (74), Expect = 0.058
 Identities = 16/26 (61%), Positives = 19/26 (73%)
 Frame = +2

Query: 359  YASLGGLLGTYNNEQYDDEQLPNGTV 436
            Y +LG LLGTYNN+  DD   P+GTV
Sbjct: 1032 YTTLG-LLGTYNNDPADDLTTPSGTV 1056


>AF022967-4|AAB69879.2|  117|Caenorhabditis elegans Hypothetical
           protein C13A2.7 protein.
          Length = 117

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
 Frame = +2

Query: 59  EAGTFLLTKDYSQNNFTVLMSANDRARYDLIVL---TRSALINIDLYKQEVSVG 211
           +A TFLLT  Y+     V       A YDL      TR  L+ ++   ++V  G
Sbjct: 35  KASTFLLTDGYTTEEIPVEEETTTEASYDLSTYNTKTRKGLVTLEELNEKVLAG 88


>U41994-9|AAK31523.1|  786|Caenorhabditis elegans Hypothetical
           protein F59A6.3 protein.
          Length = 786

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = -3

Query: 288 PCTASVSACRCTTTPSTAAGRLSTRCPTDTSCLYKS 181
           P TAS S    T+ PST +G  +T  P+ TS   KS
Sbjct: 563 PSTASRSTVSTTSGPSTTSGPSTTSGPSTTSGSTKS 598


>U55369-1|AAK52175.1| 1247|Caenorhabditis elegans Cystic fibrosis
            transmembrane conductanceregulator homolog protein 1
            protein.
          Length = 1247

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = -3

Query: 201  TSCLYKSMLIRADRVSTIRSYRARSFADISTVKLFW 94
            T+C+ +S+     R+S +R Y      D  T++  W
Sbjct: 971  TTCILESLTPHVQRISNVREYPKEPMIDKCTIRDSW 1006


>Z34801-6|CAA84329.1|  428|Caenorhabditis elegans Hypothetical
           protein F59A2.4a protein.
          Length = 428

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +2

Query: 197 EVSVGQRVLSLPAAVEGVVVHRQADTL 277
           E+ VGQ  +S+P  V  V+V + AD +
Sbjct: 149 ELDVGQNSVSVPGTVAAVLVQKTADVI 175


>AL021487-9|CAE18007.1|  118|Caenorhabditis elegans Hypothetical
           protein Y45F10B.15 protein.
          Length = 118

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -3

Query: 297 PVWPCTASVSACRCTTTPSTAAGRLSTRCPT 205
           P  P   S    +CT TP  A  ++ST C T
Sbjct: 77  PTEPIDPSNEVPQCTMTPCAATEKISTDCET 107


>U42835-2|AAA83586.1|  617|Caenorhabditis elegans Chitinase protein
           1 protein.
          Length = 617

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = -3

Query: 312 HCMSRPVWPCTASVSACRCTTTPSTAAGRLSTRCPTDTSCLYK 184
           +C +     C+ + +    TTT S      +TR PT T+  +K
Sbjct: 523 YCTTSTASGCSVTTTRAPTTTTKSAPTVTTTTRAPTTTTPAFK 565


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,998,337
Number of Sequences: 27780
Number of extensions: 168478
Number of successful extensions: 647
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 646
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 829055604
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)