Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_D18
         (464 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   4.9  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    21   6.5  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   6.5  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   6.5  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    21   8.6  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   8.6  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = -1

Query: 104 SCSGCSPW*AGRCRLPIQ*HSFIKRDQCTLTR 9
           SC GC  +     +  IQ     K  QC++ R
Sbjct: 83  SCEGCKGFFRRSIQQKIQYRPCTKNQQCSILR 114


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = +2

Query: 326 RTCKLQVSGWYYASLGGLLGTYNNEQYDD 412
           +TC ++   W +      L  YNN+ + D
Sbjct: 163 QTCIMKFGSWTFNGDQVSLALYNNKNFVD 191


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = -3

Query: 354 QPLTCSLHVRNKRLHCMSRPVWPCTASVSA 265
           QP+  + H  N+R+      VW  +A++ +
Sbjct: 290 QPIKYAKHKNNRRVWLTILLVWAISAAIGS 319


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 288 PCTASVSACRCTTTPSTAAGRLST 217
           P T + +    TTT +TAA   +T
Sbjct: 104 PATITTTTTTTTTTTATAAATATT 127


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -3

Query: 255 TTTPSTAAGRLSTRCPTDTSCLY 187
           TT+ +  +G ++ RC     CL+
Sbjct: 129 TTSTTIVSGAMAERCNFKAYCLF 151


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 11/40 (27%), Positives = 17/40 (42%)
 Frame = +3

Query: 252 WCTGRRTRWPCRATPASTYSATSCSERASCKSAVGTTRAS 371
           W T    +     TPA+   +T+  E  +C  A  + R S
Sbjct: 616 WHTRSTEKRVSAGTPAAFNISTTIYENQNCLDASSSRRGS 655


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,263
Number of Sequences: 438
Number of extensions: 1954
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12436029
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)