Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_D17
         (506 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    25   0.51 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    24   0.90 
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   3.6  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   3.6  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   4.8  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   4.8  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   8.4  

>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 24.6 bits (51), Expect = 0.51
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +1

Query: 133 PRRNINATLVSTAPVTVKLWFSTNNLYLDK 222
           P R   A+++   P  VK+WF  N+ Y  K
Sbjct: 68  PEREHLASIIRLTPTQVKIWFQ-NHRYKTK 96


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.8 bits (49), Expect = 0.90
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 347 FRSECQST*WRRLHRW 394
           F   C +T WR L+RW
Sbjct: 152 FMLHCNNTTWRCLYRW 167


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 10/24 (41%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = +2

Query: 71  QNEFSKENH*TS-NYIDNYNYSRG 139
           Q  +  +NH  S NYI++ NY +G
Sbjct: 357 QQYYYNKNHPNSENYINHQNYVQG 380


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 10/24 (41%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = +2

Query: 71  QNEFSKENH*TS-NYIDNYNYSRG 139
           Q  +  +NH  S NYI++ NY +G
Sbjct: 305 QQYYYNKNHPNSENYINHQNYVQG 328


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -1

Query: 149 FIFRLGYNYNCQYNYWSN 96
           F+  L Y Y+  Y+YW +
Sbjct: 9   FLLLLYYIYSKHYSYWQS 26


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 7/28 (25%), Positives = 17/28 (60%)
 Frame = -1

Query: 440 RCLVINNAVFKNSMCTTYVDVSIMLIDT 357
           + ++++    +++   T++DV IML  T
Sbjct: 87  KAILVHAITIRSTFSWTFIDVFIMLTST 114


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +1

Query: 133 PRRNINATLVSTAPVTVKLWFSTNNLYLDKWQ 228
           PRR   A  ++    T+K+WF  N    DK Q
Sbjct: 99  PRRCELAAQLNLPESTIKVWFQ-NRRMKDKRQ 129


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,624
Number of Sequences: 336
Number of extensions: 2285
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12049355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)