Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_D15
(578 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0464 - 3504264-3504475,3504842-3505031,3505310-3505408,350... 123 1e-28
03_06_0253 - 32666152-32666360,32666443-32666632,32666764-326668... 123 1e-28
03_06_0252 - 32656068-32656276,32656361-32656550,32656682-326567... 123 1e-28
10_01_0217 + 2337950-2338085,2340766-2342436,2342636-2342898,234... 121 4e-28
07_01_1146 + 10756897-10757065,10763869-10765521,10765638-107659... 118 3e-27
03_04_0157 + 17791540-17791681,17792809-17792908,17793386-177934... 114 4e-26
03_06_0254 - 32683991-32684030,32684502-32684631,32684790-326849... 58 5e-09
07_01_1149 + 10789733-10791209,10791326-10791588,10791745-107919... 47 1e-05
07_03_1006 + 23260903-23261354,23264532-23264889,23264949-23265575 31 0.50
07_03_1008 - 23271680-23273045,23273123-23273568 29 2.7
07_01_0450 - 3395644-3395837,3396164-3396190,3396266-3396396,339... 28 6.2
12_01_1032 + 10623089-10623930,10624554-10624734 27 8.2
04_04_1105 - 30942735-30942791,30943116-30943466,30943670-309437... 27 8.2
>07_01_0464 - 3504264-3504475,3504842-3505031,3505310-3505408,
3505561-3505653,3505926-3506891,3507267-3507485,
3508038-3508247,3508371-3508630,3508956-3510737,
3510796-3511009
Length = 1414
Score = 123 bits (296), Expect = 1e-28
Identities = 63/164 (38%), Positives = 95/164 (57%)
Frame = +1
Query: 4 TWEDKVKKAFNKGINLQASYMTSQRDGLVDYDVYAVCATEIELDVLTGTHIVSRVDLLED 183
+W++ + +A G++L A + Y Y A+E+E+D+LTG + R DL+ D
Sbjct: 1210 SWDELISQAKMVGVDLSAKELYVP-GASGSYLNYGAAASEVEIDLLTGATTILRSDLIYD 1268
Query: 184 TGVSMSPEIDIGQIEGAFVMGLGLWTTERLVYDENGRLLTNRTWTYKIPGAKDIPVDFRI 363
G S++P +D+GQ+EGAFV G+G + E V + +G L+++ TWTYKIP IP F +
Sbjct: 1269 CGRSLNPAVDLGQVEGAFVQGIGYFMNEEYVTNSDGLLVSDGTWTYKIPTVDTIPKQFNV 1328
Query: 364 SFRRNSPNPAGVLRSKATGEPSLTLAVVVTFALHEAILEGRKEF 495
+ + VL SKA+GEP L LA V A EAI R+E+
Sbjct: 1329 KLLNSGFHKKRVLSSKASGEPPLLLAASVHCATREAIRAAREEY 1372
>03_06_0253 - 32666152-32666360,32666443-32666632,32666764-32666862,
32666999-32667094,32667408-32668361,32668683-32668901,
32669282-32669491,32669617-32669879,32670041-32671717,
32672702-32672852
Length = 1355
Score = 123 bits (296), Expect = 1e-28
Identities = 62/163 (38%), Positives = 90/163 (55%)
Frame = +1
Query: 7 WEDKVKKAFNKGINLQASYMTSQRDGLVDYDVYAVCATEIELDVLTGTHIVSRVDLLEDT 186
W+ + +A + L + Y Y +E+E+DVLTG + R DL+ D
Sbjct: 1152 WKSLIAQASMASVKLTEHAYWTPDPTFTSYLNYGAAISEVEVDVLTGETTILRSDLVYDC 1211
Query: 187 GVSMSPEIDIGQIEGAFVMGLGLWTTERLVYDENGRLLTNRTWTYKIPGAKDIPVDFRIS 366
G S++P +D+GQ+EGAFV G+G +T E + +G ++ + TWTYKIP IP F +
Sbjct: 1212 GQSLNPAVDLGQVEGAFVQGIGFFTNEEYTTNSDGLVINDGTWTYKIPTVDTIPKQFNVE 1271
Query: 367 FRRNSPNPAGVLRSKATGEPSLTLAVVVTFALHEAILEGRKEF 495
++ + VL SKA+GEP L LA V A+ EAI RKEF
Sbjct: 1272 LINSARDHKRVLSSKASGEPPLLLASSVHCAMREAIRAARKEF 1314
>03_06_0252 - 32656068-32656276,32656361-32656550,32656682-32656780,
32656917-32657012,32657200-32658153,32658476-32658694,
32658911-32659120,32659241-32659503,32659605-32661281,
32663639-32663792
Length = 1356
Score = 123 bits (296), Expect = 1e-28
Identities = 62/163 (38%), Positives = 90/163 (55%)
Frame = +1
Query: 7 WEDKVKKAFNKGINLQASYMTSQRDGLVDYDVYAVCATEIELDVLTGTHIVSRVDLLEDT 186
W+ + +A + L + Y Y +E+E+DVLTG + R DL+ D
Sbjct: 1153 WKSLIAQASMASVKLTEHAYWTPDPTFTSYLNYGAAISEVEVDVLTGETTILRSDLVYDC 1212
Query: 187 GVSMSPEIDIGQIEGAFVMGLGLWTTERLVYDENGRLLTNRTWTYKIPGAKDIPVDFRIS 366
G S++P +D+GQ+EGAFV G+G +T E + +G ++ + TWTYKIP IP F +
Sbjct: 1213 GQSLNPAVDLGQVEGAFVQGIGFFTNEEYTTNSDGLVINDGTWTYKIPTVDTIPKQFNVE 1272
Query: 367 FRRNSPNPAGVLRSKATGEPSLTLAVVVTFALHEAILEGRKEF 495
++ + VL SKA+GEP L LA V A+ EAI RKEF
Sbjct: 1273 LINSARDHKRVLSSKASGEPPLLLASSVHCAMREAIRAARKEF 1315
>10_01_0217 + 2337950-2338085,2340766-2342436,2342636-2342898,
2343027-2343236,2343436-2343654,2344038-2345000,
2345279-2345374,2345482-2345580,2345953-2346142,
2346594-2346823
Length = 1358
Score = 121 bits (292), Expect = 4e-28
Identities = 61/163 (37%), Positives = 90/163 (55%)
Frame = +1
Query: 7 WEDKVKKAFNKGINLQASYMTSQRDGLVDYDVYAVCATEIELDVLTGTHIVSRVDLLEDT 186
W+ + +A + L + Y Y +E+E+DVLTG + R DL+ D
Sbjct: 1148 WKSFIAQASMASVKLTEHAYWTPDPTFTSYMNYGAATSEVEVDVLTGATTILRSDLVYDC 1207
Query: 187 GVSMSPEIDIGQIEGAFVMGLGLWTTERLVYDENGRLLTNRTWTYKIPGAKDIPVDFRIS 366
G S++P +D+GQ+EGAFV G+G +T E + +G ++ + TWTYKIP IP F +
Sbjct: 1208 GQSLNPAVDLGQVEGAFVQGVGFFTNEEYATNADGLVIHDGTWTYKIPTVDTIPKQFNVE 1267
Query: 367 FRRNSPNPAGVLRSKATGEPSLTLAVVVTFALHEAILEGRKEF 495
+ + + VL SKA+GEP L LA V A+ EAI R+EF
Sbjct: 1268 LINTARHHSRVLSSKASGEPPLLLASSVHCAMREAIRAARREF 1310
>07_01_1146 + 10756897-10757065,10763869-10765521,10765638-10765900,
10766057-10766266,10766818-10767036,10767379-10768344,
10768575-10768670,10768772-10768870,10769349-10769538,
10769623-10769855
Length = 1365
Score = 118 bits (284), Expect = 3e-27
Identities = 62/165 (37%), Positives = 93/165 (56%), Gaps = 1/165 (0%)
Frame = +1
Query: 4 TWEDKVKKAFNKGINLQAS-YMTSQRDGLVDYDVYAVCATEIELDVLTGTHIVSRVDLLE 180
+W+ + +A + INL AS Y ++D Y Y +E+E+D+LTG + R DL+
Sbjct: 1153 SWDTLISQASQENINLSASAYWVPEQDSNF-YLNYGAGTSEVEVDLLTGAITIIRSDLIY 1211
Query: 181 DTGVSMSPEIDIGQIEGAFVMGLGLWTTERLVYDENGRLLTNRTWTYKIPGAKDIPVDFR 360
D G S++P +D+GQIEG+F+ G+G + E + +G +++N TW YKIP IP F
Sbjct: 1212 DCGKSLNPAVDLGQIEGSFIQGIGFFIYEEHQTNSDGLVISNSTWDYKIPSVDTIPKQFN 1271
Query: 361 ISFRRNSPNPAGVLRSKATGEPSLTLAVVVTFALHEAILEGRKEF 495
+ VL SKA+GEP++ L V A+ EAI R EF
Sbjct: 1272 AEVLNTGYHKHRVLSSKASGEPAVVLGASVHCAVREAIRAARIEF 1316
>03_04_0157 + 17791540-17791681,17792809-17792908,17793386-17793477,
17793562-17793620,17794135-17795637,17796478-17796720,
17796831-17797145,17797571-17797573,17798399-17798638,
17798975-17799259,17799335-17799556,17800105-17800266,
17800411-17800545,17802452-17802688,17802787-17802960,
17803692-17803934
Length = 1384
Score = 114 bits (275), Expect = 4e-26
Identities = 65/160 (40%), Positives = 87/160 (54%), Gaps = 7/160 (4%)
Frame = +1
Query: 94 YDVYAVCATEIELDVLTGTHIVSRVDLLEDTGVSMSPEIDIGQIEGAFVMGLGLWTTERL 273
Y Y E+E+D LTG VD++ D G S++P IDIGQIEG F+ GLG E L
Sbjct: 1204 YFTYGAAFAEVEIDTLTGDFHTRTVDIVMDLGCSINPAIDIGQIEGGFIQGLGWAALEEL 1263
Query: 274 VY-DEN------GRLLTNRTWTYKIPGAKDIPVDFRISFRRNSPNPAGVLRSKATGEPSL 432
+ D+N G L T +YKIP DIP++F++S + NP + SKA GEP
Sbjct: 1264 KWGDDNHKWIRPGHLFTCGPGSYKIPSVNDIPLNFKVSLLKGVLNPKVIHSSKAVGEPPF 1323
Query: 433 TLAVVVTFALHEAILEGRKEFGYKDTEWLHIDTPYSVENI 552
L V FA+ +AI R E G+ D W +D+P + E I
Sbjct: 1324 FLGSAVLFAIKDAISAARAEEGHFD--WFPLDSPATPERI 1361
>03_06_0254 -
32683991-32684030,32684502-32684631,32684790-32684979,
32685025-32685099
Length = 144
Score = 58.0 bits (134), Expect = 5e-09
Identities = 26/66 (39%), Positives = 38/66 (57%)
Frame = +1
Query: 214 IGQIEGAFVMGLGLWTTERLVYDENGRLLTNRTWTYKIPGAKDIPVDFRISFRRNSPNPA 393
+GQ+EGAFV G+G +T E + +G ++ + TWTYKIP IP F + ++
Sbjct: 23 VGQVEGAFVQGIGFFTNEEYATNSDGLVIHDSTWTYKIPTVDTIPKQFNVELINSARVHK 82
Query: 394 GVLRSK 411
VL SK
Sbjct: 83 RVLSSK 88
>07_01_1149 + 10789733-10791209,10791326-10791588,10791745-10791954,
10792398-10792475,10792505-10792705,10792768-10792908,
10794749-10795714,10797824-10797919,10798450-10798638,
10798849-10798956
Length = 1242
Score = 46.8 bits (106), Expect = 1e-05
Identities = 24/96 (25%), Positives = 48/96 (50%)
Frame = +1
Query: 76 RDGLVDYDVYAVCATEIELDVLTGTHIVSRVDLLEDTGVSMSPEIDIGQIEGAFVMGLGL 255
+ G+V +D A++ +++ + V +D+ ++ +IEG+F+ G+G
Sbjct: 1100 QSGIVSWDTLISQASQENVNLSASAYWVPD----QDSKFYLNYGAGTSEIEGSFIQGIGF 1155
Query: 256 WTTERLVYDENGRLLTNRTWTYKIPGAKDIPVDFRI 363
+ E + +G +++N TW YKIP IP F +
Sbjct: 1156 FIYEEHQTNSDGLVISNSTWDYKIPSVDTIPKQFNL 1191
>07_03_1006 + 23260903-23261354,23264532-23264889,23264949-23265575
Length = 478
Score = 31.5 bits (68), Expect = 0.50
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -1
Query: 488 FLPSNMASCKAKVTTTAKVNDGSPVALDLNTPAGLGELRLNEILKSTGI-SLAPGILYVQ 312
FLP A + + A+V DG + + T AGL R+ ++L TG + AP +V+
Sbjct: 355 FLPVGEAVDASNLVELARVEDGREYEVVVTTYAGLNRYRVGDVLCVTGFHNAAPQFRFVR 414
>07_03_1008 - 23271680-23273045,23273123-23273568
Length = 603
Score = 29.1 bits (62), Expect = 2.7
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Frame = -1
Query: 488 FLPSNMASCKAKVTTTAKVNDGSPVALDLNTPAGLGELRLNEILKSTGI-SLAPGILYVQ 312
FLP + A+V G + + T AGL R+ ++L+ TG + AP +V+
Sbjct: 373 FLPVGEVVDATNLVDLARVEVGREYEVVITTYAGLSRYRVGDVLRVTGFHNAAPQFRFVR 432
Query: 311 VRLVRSRPFSSYTNRSVVHNPRPITKAPS 225
+ V T+ + +H R + +A S
Sbjct: 433 RQSVLLSVELDKTDEAELH--RAVERASS 459
>07_01_0450 -
3395644-3395837,3396164-3396190,3396266-3396396,
3396612-3396691,3397283-3397345,3397588-3397697,
3398316-3398424,3398783-3398857,3399363-3399459,
3399622-3399683,3399966-3400026,3400330-3400469,
3400747-3400839,3401345-3401393,3401534-3401634,
3401723-3401816,3401904-3402139
Length = 573
Score = 27.9 bits (59), Expect = 6.2
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = -1
Query: 536 YGVSMCSHSVSL*PNSFLPSNMASCKAKVTTTAKVNDGSPVALDLNTPAGLGELRLNEIL 357
YG + +L P+ + NM+ K + + K+ +D+ G+G + LNE L
Sbjct: 166 YGGATSIEGHTLAPHGGVCINMSLMKFALNRSQKIKSLHVEDMDVVVEPGVGWIELNEYL 225
Query: 356 KSTGI--SLAPG 327
K G+ L PG
Sbjct: 226 KPYGLFFPLDPG 237
>12_01_1032 + 10623089-10623930,10624554-10624734
Length = 340
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/50 (32%), Positives = 21/50 (42%)
Frame = +1
Query: 166 VDLLEDTGVSMSPEIDIGQIEGAFVMGLGLWTTERLVYDENGRLLTNRTW 315
V LL++ G P+ + I G G T R VY +GR R W
Sbjct: 190 VQLLDEAGAGGGPQ-QLRVIAIVGFRGSGKTTLARAVYSRSGRQFRERAW 238
>04_04_1105 -
30942735-30942791,30943116-30943466,30943670-30943762,
30943869-30944072,30944155-30944399,30945019-30945877,
30946070-30946936,30947113-30947562
Length = 1041
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -3
Query: 399 YTGWIRRVTPKRDSEVHWYIFSSRYFVCPSTIS 301
Y W + PK + +V W+I +++V PS+ S
Sbjct: 788 YKKW--KSIPKENKDVMWHIIKLKFYVAPSSES 818
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.136 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,212,889
Number of Sequences: 37544
Number of extensions: 346740
Number of successful extensions: 856
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 855
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1352600424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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