Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_D14
         (479 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    31   0.007
DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    23   1.9  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    22   3.4  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    22   3.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   4.5  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 30.7 bits (66), Expect = 0.007
 Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
 Frame = +2

Query: 2   EKTPIEGRPFQLDCVQPNAYPKPLITWKKRLSGADPNADVTDF--DRRITAGPDGNLYFT 175
           +K   +G    ++C + + +P+P++TW KR +G  P  D  DF  +       DG L  T
Sbjct: 707 DKAFAQGSDAAVEC-KADGFPRPVVTW-KRATGVSP-GDYKDFKPNNPDIKVEDGTL--T 761

Query: 176 IVTKEDVSDIYKYVCTAKN 232
           I   +  ++ Y Y+C A N
Sbjct: 762 INNIQKTNEGY-YLCEAVN 779


>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
           protein 1 protein.
          Length = 112

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -1

Query: 314 AHLCTQSCLLS 282
           AHLC Q CLL+
Sbjct: 7   AHLCAQFCLLA 17


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
 Frame = -2

Query: 409 RMSQRVASRHTV-DHGNIASFSHHILAYVLRDRLTFVPRVVFCHSLDLILY 260
           +M   +++  TV DH N+  +S   L      +L    R    H L +I+Y
Sbjct: 9   KMKDPMSASETVQDHRNLLDWSKTSLDNATEHKLPISMRFNEGHQLSIIVY 59


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
 Frame = -2

Query: 409 RMSQRVASRHTV-DHGNIASFSHHILAYVLRDRLTFVPRVVFCHSLDLILY 260
           +M   +++  TV DH N+  +S   L      +L    R    H L +I+Y
Sbjct: 9   KMKDPMSASETVQDHRNLLDWSKTSLDNATEHKLPISMRFNEGHQLSIIVY 59


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 165 RFPSGPAVMRRSKSVTS 115
           R+PSGP +  RS + T+
Sbjct: 36  RYPSGPELSDRSAAYTN 52


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,474
Number of Sequences: 336
Number of extensions: 2264
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11247091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)