Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_D12
         (334 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015A558E Cluster: UPI00015A558E related cluster; n...    32   2.9  
UniRef50_Q25AF5 Cluster: H0512B01.9 protein; n=6; Oryza sativa|R...    30   8.9  
UniRef50_A2EQQ2 Cluster: Putative uncharacterized protein; n=1; ...    30   8.9  

>UniRef50_UPI00015A558E Cluster: UPI00015A558E related cluster; n=1;
           Danio rerio|Rep: UPI00015A558E UniRef100 entry - Danio
           rerio
          Length = 522

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +3

Query: 135 CYCTYSGNGNDVRNCECPKLELELKSTPQKM 227
           C+     NGND R C  P + L L+ TPQ++
Sbjct: 454 CWTVALINGNDYRACNDPPVSLSLRVTPQRV 484


>UniRef50_Q25AF5 Cluster: H0512B01.9 protein; n=6; Oryza sativa|Rep:
           H0512B01.9 protein - Oryza sativa (Rice)
          Length = 385

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +3

Query: 90  HVVNLHPGFSCT*IHCYCTYSGNGNDVRNCECP 188
           H +    G      + YCT+ G  N + +C+CP
Sbjct: 298 HAIVSDVGSGVCGFNSYCTFDGTRNQIASCQCP 330


>UniRef50_A2EQQ2 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 356

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = +3

Query: 96  VNLHPGFSCT*IHCYCTYSGNGNDVRNCECPKLELELKSTPQKMTLKCQTL 248
           +N    F  T +H    Y         C CPK++L++K++  K  L C +L
Sbjct: 291 INAQDNFGNTPLHLASMYGIAPIIDTLCNCPKIKLDIKNSQGKTPLDCVSL 341


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 314,906,527
Number of Sequences: 1657284
Number of extensions: 5464991
Number of successful extensions: 11895
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11892
length of database: 575,637,011
effective HSP length: 86
effective length of database: 433,110,587
effective search space used: 10394654088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)